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CSPI04G08850 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G08850
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionClassical arabinogalactan protein 9
Genome locationChr4:6590530..6591717
RNA-Seq ExpressionCSPI04G08850
SyntenyCSPI04G08850
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053440.1 classical arabinogalactan protein 9 [Cucumis melo var. makuwa]2.0e-5993.18Show/hide
Query:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSP
        MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAAS          PPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSP
Subjt:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSP

Query:  PPSSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA
        PPSSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPTNSPGPSPPPPPP GNGAASVSRGMMVGGAVAGAFLAM+FA
Subjt:  PPSSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA

TYK14854.1 vegetative cell wall protein gp1 [Cucumis melo var. makuwa]7.6e-5992.61Show/hide
Query:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSP
        MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAAS          PPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSP
Subjt:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSP

Query:  PPSSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA
        PPSSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPT+SPGPSPPPPPP GNGAASVSRGMMVGGAVAGAFLAM+FA
Subjt:  PPSSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA

XP_008455676.1 PREDICTED: vegetative cell wall protein gp1 [Cucumis melo]1.1e-5792.53Show/hide
Query:  MGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSPPP
        MGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAAS          PPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSPPP
Subjt:  MGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSPPP

Query:  SSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA
        SSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPT+SPGPSPPPPPP GNGAASVSRGMMVGGAVAGAFLAM+FA
Subjt:  SSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA

XP_022984561.1 classical arabinogalactan protein 4-like [Cucurbita maxima]3.4e-3573.18Show/hide
Query:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSP
        MKMGFQFVM LALFATS MAQAPGAAPAQPP+TPAVPPPSTPPP  +       PATPPPA    ATPPPATPPPA  PP S PPSSPP+QPPASPPTSP
Subjt:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSP

Query:  PPSSPSSPPTAPPKEGPISPPT---SSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA
         P         PPKEGP S PT   +SPPSPP EG VP+ SPGP+ PPPPPG NGAA+VSRG+MVGGAVAGA LAMVFA
Subjt:  PPSSPSSPPTAPPKEGPISPPT---SSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA

XP_023545089.1 classical arabinogalactan protein 4-like [Cucurbita pepo subsp. pepo]9.0e-3676.97Show/hide
Query:  MGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPP-ATPPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSPP
        MG QF+M LA  ATS MAQAPGAAPAQPP+TPAVPPPSTPPPAASPPPATPPP ATPPPATPPPATPPPATPPPATPP A TPPSSPPSQPPA+PPTSP 
Subjt:  MGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPP-ATPPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSPP

Query:  PSSPSSPPTAPPKEGPI---SPPTSSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA
          +P+S PT PPKEGP    SP T+SPPSPP EGNVP+ +PGP+ PPPP   NGA S+SR  MVG AV+G  LAMVFA
Subjt:  PSSPSSPPTAPPKEGPI---SPPTSSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA

TrEMBL top hitse value%identityAlignment
A0A0A0L0L1 Uncharacterized protein7.4e-6093.75Show/hide
Query:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSP
        MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAAS          PPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSP
Subjt:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSP

Query:  PPSSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA
        PPSSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPTNSPGPSPPPPPP GNGAASVSRGMMVGGAVAGAFLAMVFA
Subjt:  PPSSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA

A0A1S3C1K1 vegetative cell wall protein gp15.3e-5892.53Show/hide
Query:  MGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSPPP
        MGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAAS          PPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSPPP
Subjt:  MGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSPPP

Query:  SSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA
        SSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPT+SPGPSPPPPPP GNGAASVSRGMMVGGAVAGAFLAM+FA
Subjt:  SSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA

A0A5A7UE17 Classical arabinogalactan protein 99.6e-6093.18Show/hide
Query:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSP
        MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAAS          PPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSP
Subjt:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSP

Query:  PPSSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA
        PPSSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPTNSPGPSPPPPPP GNGAASVSRGMMVGGAVAGAFLAM+FA
Subjt:  PPSSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA

A0A5D3CV77 Vegetative cell wall protein gp13.7e-5992.61Show/hide
Query:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSP
        MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAAS          PPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSP
Subjt:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSP

Query:  PPSSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA
        PPSSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPT+SPGPSPPPPPP GNGAASVSRGMMVGGAVAGAFLAM+FA
Subjt:  PPSSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA

A0A6J1J5L5 classical arabinogalactan protein 4-like1.7e-3573.18Show/hide
Query:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSP
        MKMGFQFVM LALFATS MAQAPGAAPAQPP+TPAVPPPSTPPP  +       PATPPPA    ATPPPATPPPA  PP S PPSSPP+QPPASPPTSP
Subjt:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPPATPPPATPPPASTPPSSPPSQPPASPPTSP

Query:  PPSSPSSPPTAPPKEGPISPPT---SSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA
         P         PPKEGP S PT   +SPPSPP EG VP+ SPGP+ PPPPPG NGAA+VSRG+MVGGAVAGA LAMVFA
Subjt:  PPSSPSSPPTAPPKEGPISPPT---SSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATATATATATCTTTCCTATTGCTATTCATTTCAACTTCACAATAAACACACTTTCTCTAAATTTTTCTCTCTTCACAAACCCTTTTCTCTTTTAACATCTCTCTC
TATCTTTTGTTTGGTAGAGAGAATGAAAATGGGTTTCCAATTTGTAATGTTTTTAGCCTTATTTGCCACTTCTTGTATGGCTCAAGCTCCAGGTGCTGCTCCGGCTCAGC
CACCTTCCACCCCCGCCGTCCCTCCCCCGTCTACTCCTCCCCCGGCAGCATCCCCACCTCCCGCCACTCCTCCTCCAGCAACCCCACCACCGGCTACTCCTCCTCCAGCA
ACCCCACCACCGGCTACTCCTCCTCCAGCCACCCCACCACCTGCTTCGACCCCACCATCATCGCCTCCGAGCCAGCCCCCAGCTTCACCTCCTACATCTCCACCACCATC
ATCACCTAGCTCGCCTCCAACAGCGCCACCAAAGGAGGGTCCAATCTCACCTCCGACTTCATCTCCTCCATCACCACCACCAGAAGGGAATGTCCCAACAAACAGCCCTG
GACCAAGCCCACCGCCACCCCCACCGGGAGGAAATGGGGCGGCAAGCGTTAGCCGGGGAATGATGGTGGGTGGTGCCGTGGCCGGAGCTTTCTTGGCAATGGTATTTGCT
TAG
mRNA sequenceShow/hide mRNA sequence
AATGATTAATAAAAAATATATAGTAAATAATGTGATGGAAGTTCTTTTTTTAATGTGCAAATTTCGAGTGTAATTATGATTTATAAGAGCAAAATGATTAAAAAAGGAAT
TTGGGGAATCTCGACCATTATTGGTGAAGAAAGACAAGGCAAGGCTGTCTTTCAAGTCCCCAACTTCACCACTCTCTCTATTTTCTTTTTCTTTCCTTTCTATTATACAC
ATACTCACATATATGATATATATATATCTTTCCTATTGCTATTCATTTCAACTTCACAATAAACACACTTTCTCTAAATTTTTCTCTCTTCACAAACCCTTTTCTCTTTT
AACATCTCTCTCTATCTTTTGTTTGGTAGAGAGAATGAAAATGGGTTTCCAATTTGTAATGTTTTTAGCCTTATTTGCCACTTCTTGTATGGCTCAAGCTCCAGGTGCTG
CTCCGGCTCAGCCACCTTCCACCCCCGCCGTCCCTCCCCCGTCTACTCCTCCCCCGGCAGCATCCCCACCTCCCGCCACTCCTCCTCCAGCAACCCCACCACCGGCTACT
CCTCCTCCAGCAACCCCACCACCGGCTACTCCTCCTCCAGCCACCCCACCACCTGCTTCGACCCCACCATCATCGCCTCCGAGCCAGCCCCCAGCTTCACCTCCTACATC
TCCACCACCATCATCACCTAGCTCGCCTCCAACAGCGCCACCAAAGGAGGGTCCAATCTCACCTCCGACTTCATCTCCTCCATCACCACCACCAGAAGGGAATGTCCCAA
CAAACAGCCCTGGACCAAGCCCACCGCCACCCCCACCGGGAGGAAATGGGGCGGCAAGCGTTAGCCGGGGAATGATGGTGGGTGGTGCCGTGGCCGGAGCTTTCTTGGCA
ATGGTATTTGCTTAGAGCGATTGAGTTCAAACGACACAAAGAGTGGAGTGCGATCCATTTTGGTGTTGGTTTTAATTATTGAAATGGAAAAATTTGATATTTGATATTTA
TGTTAATTGTAGTGTTGTTAATTTTTCCTTGATTATAACTTCTTCCCAATATTTGTGTATGGTATTCTGTTTGGAGTTCTGATTATTAATGTTTTTCTTCGGTGATTCAT
TATTTTTATGTGTGGGATACGTGGTTATTGTAGATGGATATCATTGTGTACATCCAATCATGAATAAACATAGATTTCCATTCTTTTC
Protein sequenceShow/hide protein sequence
MIYIYLSYCYSFQLHNKHTFSKFFSLHKPFSLLTSLSIFCLVERMKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPATPPPA
TPPPATPPPATPPPASTPPSSPPSQPPASPPTSPPPSSPSSPPTAPPKEGPISPPTSSPPSPPPEGNVPTNSPGPSPPPPPPGGNGAASVSRGMMVGGAVAGAFLAMVFA