; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G08950 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G08950
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUbiquitin-conjugating enzyme E2 like
Genome locationChr4:6757429..6759250
RNA-Seq ExpressionCSPI04G08950
SyntenyCSPI04G08950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607098.1 hypothetical protein SDJN03_00440, partial [Cucurbita argyrosperma subsp. sororia]5.2e-3252.13Show/hide
Query:  MELLTQPHLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTEEKERILVPKNG-SMDRS
        ME+ T+P +  + ++          + +++ + S +   T TP  +T         EK  K          +C+TPTP+EKTEEK+RILVP NG  MDR 
Subjt:  MELLTQPHLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTEEKERILVPKNG-SMDRS

Query:  KVPKSPAKVNLECKTPIQRVKMGGIELPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLS
        KVPKSP  V  E K      + GGI LPKNGTPNRLK+P AFKY ERY SPTD+M+SPI+KGLLARTRKGAVPSKMHELR SEMSL S
Subjt:  KVPKSPAKVNLECKTPIQRVKMGGIELPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLS

XP_008462927.1 PREDICTED: uncharacterized protein LOC103501189 [Cucumis melo]1.2e-8184.66Show/hide
Query:  MELLTQPHLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTEEKERILVPKNGSMDRSK
        ME+LT+ H+QLSDS+D+QT AILIPELDK+L+ISNSE KTTTP EKTEEKQR+FV  K SKVPKSP +L ++C+TPTP+EKT++KERILVPKNGSMDRSK
Subjt:  MELLTQPHLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTEEKERILVPKNGSMDRSK

Query:  VPKSPAKVNLECKTPIQRVKMGGIELPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLSQS
        VPKSP KVNLECKTP QRVK+GGIELPKNGTPNRLKLP+AFKYPERYKSPTD+MISPISKGLLARTRKGAVPSKMHELRNSEMSLLSQS
Subjt:  VPKSPAKVNLECKTPIQRVKMGGIELPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLSQS

XP_011653365.1 uncharacterized protein LOC105435203 [Cucumis sativus]3.0e-96100Show/hide
Query:  MELLTQPHLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTEEKERILVPKNGSMDRSK
        MELLTQPHLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTEEKERILVPKNGSMDRSK
Subjt:  MELLTQPHLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTEEKERILVPKNGSMDRSK

Query:  VPKSPAKVNLECKTPIQRVKMGGIELPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLSQS
        VPKSPAKVNLECKTPIQRVKMGGIELPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLSQS
Subjt:  VPKSPAKVNLECKTPIQRVKMGGIELPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLSQS

XP_022155023.1 uncharacterized protein LOC111022170 [Momordica charantia]1.2e-3358.75Show/hide
Query:  KISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTE---EKERILVPKNGSMDRSKVPKSPAKVNLECKTPIQRVKMGGIELPK
        K++ +     TP  +T +K++   +   ++  KS  E+    +T TP EK E   EK+RILVPKNGSMDR KVPKSP         P  +VK  GIELPK
Subjt:  KISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTE---EKERILVPKNGSMDRSKVPKSPAKVNLECKTPIQRVKMGGIELPK

Query:  NGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLSQ
        NGTPNRLK+P AFKYPERY SPTD+M+SPISKGLLARTRKGAVPSKMHELR  EMSL+ Q
Subjt:  NGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLSQ

XP_038881324.1 uncharacterized protein LOC120072868 [Benincasa hispida]1.1e-6671.43Show/hide
Query:  MELLTQP----------HLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEK----VSKVPKSPRELIVQCETPTPNEKTEEKE
        ME+LTQP           LQ+  S DAQT A  IPELD++L+ S  E KT TP EKTEEKQRI V E      S VPKSP +L ++C+TP+P+EKTEEK 
Subjt:  MELLTQP----------HLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEK----VSKVPKSPRELIVQCETPTPNEKTEEKE

Query:  RILVPKNGSMDRSKVPKSPAKVNLECKTPIQRVKMGGIELPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLL
        RILV KNGSMDRSKVPKSPAK+NLECKTP QRVK+GGIE PKNGTPNRLKLP+AFKYPERY SPTD+MISPISKG+LARTRKGAVPSKMHELRN E+SLL
Subjt:  RILVPKNGSMDRSKVPKSPAKVNLECKTPIQRVKMGGIELPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLL

Query:  SQS
         QS
Subjt:  SQS

TrEMBL top hitse value%identityAlignment
A0A0A0L0M1 Uncharacterized protein1.4e-96100Show/hide
Query:  MELLTQPHLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTEEKERILVPKNGSMDRSK
        MELLTQPHLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTEEKERILVPKNGSMDRSK
Subjt:  MELLTQPHLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTEEKERILVPKNGSMDRSK

Query:  VPKSPAKVNLECKTPIQRVKMGGIELPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLSQS
        VPKSPAKVNLECKTPIQRVKMGGIELPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLSQS
Subjt:  VPKSPAKVNLECKTPIQRVKMGGIELPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLSQS

A0A1S3CI15 uncharacterized protein LOC1035011895.9e-8284.66Show/hide
Query:  MELLTQPHLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTEEKERILVPKNGSMDRSK
        ME+LT+ H+QLSDS+D+QT AILIPELDK+L+ISNSE KTTTP EKTEEKQR+FV  K SKVPKSP +L ++C+TPTP+EKT++KERILVPKNGSMDRSK
Subjt:  MELLTQPHLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTEEKERILVPKNGSMDRSK

Query:  VPKSPAKVNLECKTPIQRVKMGGIELPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLSQS
        VPKSP KVNLECKTP QRVK+GGIELPKNGTPNRLKLP+AFKYPERYKSPTD+MISPISKGLLARTRKGAVPSKMHELRNSEMSLLSQS
Subjt:  VPKSPAKVNLECKTPIQRVKMGGIELPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLSQS

A0A5A7UZK0 Uncharacterized protein5.9e-8284.66Show/hide
Query:  MELLTQPHLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTEEKERILVPKNGSMDRSK
        ME+LT+ H+QLSDS+D+QT AILIPELDK+L+ISNSE KTTTP EKTEEKQR+FV  K SKVPKSP +L ++C+TPTP+EKT++KERILVPKNGSMDRSK
Subjt:  MELLTQPHLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTEEKERILVPKNGSMDRSK

Query:  VPKSPAKVNLECKTPIQRVKMGGIELPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLSQS
        VPKSP KVNLECKTP QRVK+GGIELPKNGTPNRLKLP+AFKYPERYKSPTD+MISPISKGLLARTRKGAVPSKMHELRNSEMSLLSQS
Subjt:  VPKSPAKVNLECKTPIQRVKMGGIELPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLSQS

A0A6J1DLV5 uncharacterized protein LOC1110221706.0e-3458.75Show/hide
Query:  KISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTE---EKERILVPKNGSMDRSKVPKSPAKVNLECKTPIQRVKMGGIELPK
        K++ +     TP  +T +K++   +   ++  KS  E+    +T TP EK E   EK+RILVPKNGSMDR KVPKSP         P  +VK  GIELPK
Subjt:  KISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTE---EKERILVPKNGSMDRSKVPKSPAKVNLECKTPIQRVKMGGIELPK

Query:  NGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLSQ
        NGTPNRLK+P AFKYPERY SPTD+M+SPISKGLLARTRKGAVPSKMHELR  EMSL+ Q
Subjt:  NGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLSQ

A0A6J1KFQ1 uncharacterized protein LOC1114928134.3e-3251.6Show/hide
Query:  MELLTQPHLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTEEKERILVPKNG-SMDRS
        ME+ T+P +  + ++          + +++ + S +   T TP  +T         EK  K          +C+TPTP+EKTEEK+RILVP NG  MDR 
Subjt:  MELLTQPHLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTEEKERILVPKNG-SMDRS

Query:  KVPKSPAKVNLECKTPIQRVKMGGIELPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLS
        KVPKSP  V  E K      + GGI  PKNGTPNRLK+P AFKY ERY SPTD+M+SPI+KGLLARTRKGAVPSKMHELR SEMSL S
Subjt:  KVPKSPAKVNLECKTPIQRVKMGGIELPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02120.1 hydroxyproline-rich glycoprotein family protein1.8e-1455.56Show/hide
Query:  LPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGA---VP-----SKMHELRNSEMSLLSQS
        + K GTP RL++P+AFKYPERY+SPTD M+SP++KGLLARTRK +   +P     +K+ ELR  E  L S S
Subjt:  LPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGA---VP-----SKMHELRNSEMSLLSQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTTCTCACCCAGCCACACCTTCAACTTTCAGACTCTGAGGATGCCCAAACGACAGCGATCCTAATCCCAGAACTTGACAAAGAGTTGAAAATTTCAAATTCTGA
GTCTAAAACTACAACCCCACATGAGAAAACAGAAGAAAAACAAAGGATTTTTGTTTCTGAAAAGGTATCCAAGGTGCCAAAAAGCCCTAGAGAGCTGATTGTGCAGTGTG
AAACTCCAACTCCAAACGAGAAAACAGAGGAAAAAGAGAGGATTTTGGTCCCAAAAAATGGGTCAATGGATCGATCCAAGGTGCCAAAAAGCCCTGCAAAGGTGAATTTG
GAGTGTAAAACTCCGATACAAAGAGTGAAAATGGGAGGTATTGAGTTACCTAAAAATGGTACTCCTAATCGCCTCAAACTCCCCGTCGCATTCAAATATCCGGAGAGGTA
TAAAAGTCCCACTGATATGATGATTTCTCCCATCAGCAAAGGCCTTCTTGCCAGAACAAGGAAAGGAGCGGTTCCTTCCAAGATGCATGAGTTGAGAAATTCAGAGATGA
GCCTTCTATCTCAGAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATCCTCACTCCTCGGTCCTTACACAGCAACGGCTCTTCTCTGTCTCCCATATTAAATAAATCTCAACCCAAATCCTATTCCAATTCCTCCATTACTTTCTCTTCTTCTTC
TTCCTCTTTTTCAAGCAAATCTTATTCTAATGGAGCTTCTCACCCAGCCACACCTTCAACTTTCAGACTCTGAGGATGCCCAAACGACAGCGATCCTAATCCCAGAACTT
GACAAAGAGTTGAAAATTTCAAATTCTGAGTCTAAAACTACAACCCCACATGAGAAAACAGAAGAAAAACAAAGGATTTTTGTTTCTGAAAAGGTATCCAAGGTGCCAAA
AAGCCCTAGAGAGCTGATTGTGCAGTGTGAAACTCCAACTCCAAACGAGAAAACAGAGGAAAAAGAGAGGATTTTGGTCCCAAAAAATGGGTCAATGGATCGATCCAAGG
TGCCAAAAAGCCCTGCAAAGGTGAATTTGGAGTGTAAAACTCCGATACAAAGAGTGAAAATGGGAGGTATTGAGTTACCTAAAAATGGTACTCCTAATCGCCTCAAACTC
CCCGTCGCATTCAAATATCCGGAGAGGTATAAAAGTCCCACTGATATGATGATTTCTCCCATCAGCAAAGGCCTTCTTGCCAGAACAAGGAAAGGAGCGGTTCCTTCCAA
GATGCATGAGTTGAGAAATTCAGAGATGAGCCTTCTATCTCAGAGCTGAACAAGATAAATGGCTATAAAAAAAAAAAAAAAACTTCACGGATTCTATTCGTTTTCATCTT
CAAGAATTTGCTCCACTCAAGCTGTGATGCAAAAATCTACCGAGCTTCTTTTTAGAAGAAGAACATTATTCTATTTCCATCCCCTTTTATCTCCTCATTACTTTGTTTAA
CGTTTCTTTCAATCTGCTCTTGTGAATTATTATGTCATATAATATTGTGGGTTAGTGGGTTAATTTTTCCCCTCTCAAGTGCTTTGTGAATATTTGTTTTGTGCAACTAT
TATTCAAAATTACTAATCCAAATGGTTTGATAAATATATGACTCATTTTCCCCCCTTTATATTAATAGGAAAACTATGGAGAGATTGTGAATATGGTTTAAATATCATCA
CGGAAGTCAAAAGCGCAATCTTTACAAGTTTATCCTTTTCTCAAATAACAAAAGACTCGAAAAGAAAAGCTAACCAAATTTTAAAGTTTGCTGCACGACGAGTCAGTCAA
TACGAACTTCATACCATTGAATCGAACCCACGTCTCCATCAATTTCAAGTTCACAAACAGACTTGACTAAGAAAGAAACGGCTTCCTCAATGGACTGAAAGCGTGAGAGA
TCAGGTGGAAGGGGAGTTGGCCAATTCTCAAGCCAACCCTTCAAAATGGTTTCCAATTCTTGTTTGGAAACAAATTTCTCCTCTTCTCCAGGCTCTAACAGTACATATGT
ATCACTACTTTCATTTATCCTTCTTCTTCTACTTCCGAATACCTATCCAAAGTTTATCACCCCA
Protein sequenceShow/hide protein sequence
MELLTQPHLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEKVSKVPKSPRELIVQCETPTPNEKTEEKERILVPKNGSMDRSKVPKSPAKVNL
ECKTPIQRVKMGGIELPKNGTPNRLKLPVAFKYPERYKSPTDMMISPISKGLLARTRKGAVPSKMHELRNSEMSLLSQS