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CSPI04G09040 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G09040
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionBED-type domain-containing protein
Genome locationChr4:6827779..6828120
RNA-Seq ExpressionCSPI04G09040
SyntenyCSPI04G09040
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A0KZ75 Uncharacterized protein3.9e-5798.23Show/hide
Query:  MKVTMMMIKVLVTVATDRGGQVQDNMEGGQQYQLNPLTRESQFTHVTQDDHSHRANGPRIGAIGKPFICRRSVHDDAQIYTDSVVSRMEGKSLDRQYGHE
        MKVTMMMIKV+VTVATDRGGQVQDNMEGGQQYQLNPLTRESQFTHVTQDDHSHRANGPRIGAIGKPFICRRSVHDDAQIYTDSVVSRMEGKSLDRQYGHE
Subjt:  MKVTMMMIKVLVTVATDRGGQVQDNMEGGQQYQLNPLTRESQFTHVTQDDHSHRANGPRIGAIGKPFICRRSVHDDAQIYTDSVVSRMEGKSLDRQYGHE

Query:  QYVYNNSNYVIFG
        QYVYNNSNYVI G
Subjt:  QYVYNNSNYVIFG
A0A438ICG0 BED-type domain-containing protein8.6e-0440Show/hide
Query:  TDRGGQVQDNMEGG------QQYQLNPLTRESQFTHVTQD-DHSHRANGPRIGAIGKPFICRRSVHDDAQIYTDSVVSR-MEGKSLDRQY
        TD GG   DN  G        QY ++  T E+ FTH TQD DH  R  GP IGAIGKP+  R+ + +    Y + ++SR  E  S+  Q+
Subjt:  TDRGGQVQDNMEGG------QQYQLNPLTRESQFTHVTQD-DHSHRANGPRIGAIGKPFICRRSVHDDAQIYTDSVVSR-MEGKSLDRQY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTGACGATGATGATGATTAAGGTGCTAGTTACGGTAGCGACAGATAGAGGTGGTCAAGTACAAGACAATATGGAAGGAGGTCAACAATATCAACTTAACCCACT
CACTAGAGAATCTCAATTCACACATGTCACACAAGACGACCACAGCCATAGAGCCAATGGACCAAGAATTGGAGCAATAGGAAAACCTTTCATTTGTAGAAGATCCGTGC
ATGATGATGCTCAAATTTATACTGACTCGGTAGTTTCAAGAATGGAGGGGAAGAGTTTGGACCGTCAATATGGACACGAACAATATGTCTATAACAATAGTAATTACGTT
ATATTTGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTGACGATGATGATGATTAAGGTGCTAGTTACGGTAGCGACAGATAGAGGTGGTCAAGTACAAGACAATATGGAAGGAGGTCAACAATATCAACTTAACCCACT
CACTAGAGAATCTCAATTCACACATGTCACACAAGACGACCACAGCCATAGAGCCAATGGACCAAGAATTGGAGCAATAGGAAAACCTTTCATTTGTAGAAGATCCGTGC
ATGATGATGCTCAAATTTATACTGACTCGGTAGTTTCAAGAATGGAGGGGAAGAGTTTGGACCGTCAATATGGACACGAACAATATGTCTATAACAATAGTAATTACGTT
ATATTTGGCTAG
Protein sequenceShow/hide protein sequence
MKVTMMMIKVLVTVATDRGGQVQDNMEGGQQYQLNPLTRESQFTHVTQDDHSHRANGPRIGAIGKPFICRRSVHDDAQIYTDSVVSRMEGKSLDRQYGHEQYVYNNSNYV
IFG