; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G09390 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G09390
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr4:7337321..7337788
RNA-Seq ExpressionCSPI04G09390
SyntenyCSPI04G09390
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061157.1 hypothetical protein E6C27_scaffold753G00260 [Cucumis melo var. makuwa]4.1e-2284.51Show/hide
Query:  MAAPPSAVLSVVLVALLLICVANAHEGHAHPPSSEHHLAPPPQHSAAIINSLSYFWSMAMAMVAASWIILF
        MAA PSAVLSV+LV LLLI V NAHEGHAHPPSSEHH+APPPQH+AAI+NSLSYFWSMAMAMVAAS  I F
Subjt:  MAAPPSAVLSVVLVALLLICVANAHEGHAHPPSSEHHLAPPPQHSAAIINSLSYFWSMAMAMVAASWIILF

KAG6576850.1 hypothetical protein SDJN03_24424, partial [Cucurbita argyrosperma subsp. sororia]4.7e-1874.29Show/hide
Query:  MAAPPSAVLSVVLVALLLICVANAHEGHAHPPSSEHHLAPPPQHSAA-IINSLSYFWSMAMAMVAASWII
        MAA PSAVL+VVLVALLL+ VA AHEGH HPPSS+ H+APPP+H+AA  +NSLSYFWSMA+AMVA+SW++
Subjt:  MAAPPSAVLSVVLVALLLICVANAHEGHAHPPSSEHHLAPPPQHSAA-IINSLSYFWSMAMAMVAASWII

KAG7030901.1 Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.4e-1468.12Show/hide
Query:  MAAPPSAVLSVVLVALLLICVANAHEGHAHPPSSEHHLAPPPQHSAAIINSLSYFWSMAMAMVAASWII
        MAA PSAVLS VL  LLL+ VAN HEGH HPPSSE   +PPP  +AAI+NS SY WSM MAMVA SW++
Subjt:  MAAPPSAVLSVVLVALLLICVANAHEGHAHPPSSEHHLAPPPQHSAAIINSLSYFWSMAMAMVAASWII

KGN53725.1 hypothetical protein Csa_014716 [Cucumis sativus]4.5e-29100Show/hide
Query:  MAAPPSAVLSVVLVALLLICVANAHEGHAHPPSSEHHLAPPPQHSAAIINSLSYFWSMAMAMVAASWIILF
        MAAPPSAVLSVVLVALLLICVANAHEGHAHPPSSEHHLAPPPQHSAAIINSLSYFWSMAMAMVAASWIILF
Subjt:  MAAPPSAVLSVVLVALLLICVANAHEGHAHPPSSEHHLAPPPQHSAAIINSLSYFWSMAMAMVAASWIILF

TYK29918.1 hypothetical protein E5676_scaffold652G00020 [Cucumis melo var. makuwa]7.0e-2284.51Show/hide
Query:  MAAPPSAVLSVVLVALLLICVANAHEGHAHPPSSEHHLAPPPQHSAAIINSLSYFWSMAMAMVAASWIILF
        MAA PSAVLSV+LV LLLI V NAHEGHAHPPSSEHH+APPPQH+AAI+NSLSYFWSMAMAMVAAS  I F
Subjt:  MAAPPSAVLSVVLVALLLICVANAHEGHAHPPSSEHHLAPPPQHSAAIINSLSYFWSMAMAMVAASWIILF

TrEMBL top hitse value%identityAlignment
A0A0A0KVS3 Uncharacterized protein2.2e-29100Show/hide
Query:  MAAPPSAVLSVVLVALLLICVANAHEGHAHPPSSEHHLAPPPQHSAAIINSLSYFWSMAMAMVAASWIILF
        MAAPPSAVLSVVLVALLLICVANAHEGHAHPPSSEHHLAPPPQHSAAIINSLSYFWSMAMAMVAASWIILF
Subjt:  MAAPPSAVLSVVLVALLLICVANAHEGHAHPPSSEHHLAPPPQHSAAIINSLSYFWSMAMAMVAASWIILF

A0A5A7V2Q5 Uncharacterized protein2.0e-2284.51Show/hide
Query:  MAAPPSAVLSVVLVALLLICVANAHEGHAHPPSSEHHLAPPPQHSAAIINSLSYFWSMAMAMVAASWIILF
        MAA PSAVLSV+LV LLLI V NAHEGHAHPPSSEHH+APPPQH+AAI+NSLSYFWSMAMAMVAAS  I F
Subjt:  MAAPPSAVLSVVLVALLLICVANAHEGHAHPPSSEHHLAPPPQHSAAIINSLSYFWSMAMAMVAASWIILF

A0A5D3E2A2 Uncharacterized protein3.4e-2284.51Show/hide
Query:  MAAPPSAVLSVVLVALLLICVANAHEGHAHPPSSEHHLAPPPQHSAAIINSLSYFWSMAMAMVAASWIILF
        MAA PSAVLSV+LV LLLI V NAHEGHAHPPSSEHH+APPPQH+AAI+NSLSYFWSMAMAMVAAS  I F
Subjt:  MAAPPSAVLSVVLVALLLICVANAHEGHAHPPSSEHHLAPPPQHSAAIINSLSYFWSMAMAMVAASWIILF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTCCTCCTTCTGCCGTTCTCAGCGTCGTCCTGGTGGCTCTGCTGCTCATTTGTGTTGCTAATGCACACGAGGGCCACGCACATCCTCCGTCCTCCGAGCACCA
TCTTGCCCCTCCACCCCAACACAGCGCAGCCATCATCAACAGTCTTTCATACTTTTGGTCTATGGCAATGGCCATGGTGGCTGCATCTTGGATAATATTGTTTTAG
mRNA sequenceShow/hide mRNA sequence
GAGCTTATAAATACAATACACCAATCTACCAAAATTTATTAACTCTTCTCTTTGCCATAGTTTTCCTCTCTCTTCTTCCATAATAATAATATGGCAGCTCCTCCTTCTGC
CGTTCTCAGCGTCGTCCTGGTGGCTCTGCTGCTCATTTGTGTTGCTAATGCACACGAGGGCCACGCACATCCTCCGTCCTCCGAGCACCATCTTGCCCCTCCACCCCAAC
ACAGCGCAGCCATCATCAACAGTCTTTCATACTTTTGGTCTATGGCAATGGCCATGGTGGCTGCATCTTGGATAATATTGTTTTAGTTATTTTAATCTTACTGTGTAAAA
CTTCAATTCCTGCATGAAGTTCACATTTCTGTTTAATTAATTATTTTGCCTATTTTCGCATACTGTACTCTCCTTCGGTGATGTGTTTTTGTTTTTGTTTTCGTTTGGAT
GTCATTTTGAGTAATTACCACGTCGACC
Protein sequenceShow/hide protein sequence
MAAPPSAVLSVVLVALLLICVANAHEGHAHPPSSEHHLAPPPQHSAAIINSLSYFWSMAMAMVAASWIILF