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CSPI04G09400 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G09400
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionclassical arabinogalactan protein 4
Genome locationChr4:7342874..7343446
RNA-Seq ExpressionCSPI04G09400
SyntenyCSPI04G09400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649311.1 hypothetical protein Csa_014808 [Cucumis sativus]9.1e-7799.43Show/hide
Query:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAP
        MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPP TPPELSPVPTSYAPTSPPMANPPTLSPTAP
Subjt:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAI
        PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAI
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAI
KAG7014869.1 hypothetical protein SDJN02_22499, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-4870.16Show/hide
Query:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAP
        MAS  +LN++T A LLIS AANSP PSPAP+ ESP WKWTP  E PSSPP  EPP           SP  +PPELSPVP+S  PTSPP ANPPTLSP A 
Subjt:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA
        PPAVKSP HAPSP+KTKAPAPAPSK SP PA+APKSS  PVSSPP+PNG+MEPPTPSVAP   K  NG  ANRFAIGGS+A GLM AA IA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA
XP_008462882.1 PREDICTED: classical arabinogalactan protein 4 [Cucumis melo]8.2e-7894.24Show/hide
Query:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAP
        MASSTLLNLLTLAFLLIS AANSPAPSPAP+AESPTWKWTP+N+PPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVP+SY+PTSPPMANPPTLSPTAP
Subjt:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSI-AGLMIAAFIA
        PPAV SPSHAPSPAKTKAPAPAPSK SPAPAKAPKSSKAPVSSPPSPNGQMEPPTPS APAPSKEGNGAGANRFAIGGSI AG MIAAFIA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSI-AGLMIAAFIA
XP_011654351.1 classical arabinogalactan protein 4 [Cucumis sativus]1.0e-8399.47Show/hide
Query:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAP
        MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPP TPPELSPVPTSYAPTSPPMANPPTLSPTAP
Subjt:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIAGLMIAAFIA
        PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIAGLMIAAFIA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIAGLMIAAFIA
XP_038877309.1 vegetative cell wall protein gp1-like [Benincasa hispida]4.7e-6583.77Show/hide
Query:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAP
        MASST+L +LT+A LLIS AANSP PSPAP  ESP WKWTPSNEPPSSPP AEPPM TTSPPSPTISPPATPPE+SP+P+SYAPT PP ANPPTLSPTA 
Subjt:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA
        PP VKSPSHAPSPAKTKAPAPAPSK SP+PAKAPKSSKAP SSPPSPNG MEPP PSVAPAPSK+ NG  ANRFAIGGS+A GLMIAA IA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA
TrEMBL top hitse value%identityAlignment
A0A0A0L0Q7 Uncharacterized protein4.9e-8499.47Show/hide
Query:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAP
        MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPP TPPELSPVPTSYAPTSPPMANPPTLSPTAP
Subjt:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIAGLMIAAFIA
        PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIAGLMIAAFIA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIAGLMIAAFIA
A0A1S3CHW9 classical arabinogalactan protein 44.0e-7894.24Show/hide
Query:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAP
        MASSTLLNLLTLAFLLIS AANSPAPSPAP+AESPTWKWTP+N+PPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVP+SY+PTSPPMANPPTLSPTAP
Subjt:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSI-AGLMIAAFIA
        PPAV SPSHAPSPAKTKAPAPAPSK SPAPAKAPKSSKAPVSSPPSPNGQMEPPTPS APAPSKEGNGAGANRFAIGGSI AG MIAAFIA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSI-AGLMIAAFIA
A0A5A7V3Q7 Classical arabinogalactan protein 44.0e-7894.24Show/hide
Query:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAP
        MASSTLLNLLTLAFLLIS AANSPAPSPAP+AESPTWKWTP+N+PPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVP+SY+PTSPPMANPPTLSPTAP
Subjt:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSI-AGLMIAAFIA
        PPAV SPSHAPSPAKTKAPAPAPSK SPAPAKAPKSSKAPVSSPPSPNGQMEPPTPS APAPSKEGNGAGANRFAIGGSI AG MIAAFIA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSI-AGLMIAAFIA
A0A6J1E3R0 extensin-like4.7e-4768.59Show/hide
Query:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAP
        MAS  +LN++T A LLIS +ANSP PSPAP+ ESP WKWTP  + PSSPP  EPP           SP  +PPELSPVP+S  PTSPP ANPPTLSP A 
Subjt:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA
        PPAVKSP HAPSP+KTKAPAPAPSK S  PA+APKSS APVSSPP+PNG+MEPPTPSVAP   K  NG  ANRFAIGG++A GLM AA IA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA
A0A6J1JCM0 extensin-like6.4e-4467.02Show/hide
Query:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAP
        MAS  +LN++T A LLIS +ANSP PS AP+ ES  WKWTP  E PSSPP  EPP           SP  +PPELSPVP+S  PTSP  ANPPTLSP A 
Subjt:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA
        PPAVKSP HAPSP+KTKAPAPAPSK SP PA+APKSS AP SSPP+PNG+MEPPTPSVAP   K  NG  ANRFAI  S+A GLM AA IA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G44191.1 ECA1 gametogenesis related family protein8.4e-0435.37Show/hide
Query:  PAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSP-TISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAPPPAVKS----PSHAPSPAKTKA
        P+P P   +  P    +P   PPS  P+  P     SPP P   SPP  P +  P P   +P   P  +PP   P++PPP+ K     P  +PSP K   
Subjt:  PAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSP-TISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAPPPAVKS----PSHAPSPAKTKA

Query:  PAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKE
        P P P K+ P+P K      +P  SPP P     PP PS  P   K+
Subjt:  PAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCCACCCTTCTCAATCTTCTCACCCTAGCCTTCCTGCTTATCTCCACCGCTGCCAACTCCCCGGCACCCTCTCCAGCACCCACCGCCGAATCACCAACGTG
GAAATGGACACCTTCTAACGAACCACCCTCCTCTCCACCCACTGCGGAGCCGCCAATGACGACAACGTCTCCACCTTCGCCTACAATATCTCCCCCGGCCACCCCACCGG
AGCTCAGCCCCGTTCCAACATCCTATGCACCCACTTCGCCGCCCATGGCTAACCCACCTACATTGTCGCCGACCGCTCCACCGCCGGCAGTGAAGAGTCCAAGTCATGCC
CCGTCGCCGGCGAAAACAAAAGCACCGGCTCCAGCTCCGTCTAAAACTAGTCCGGCGCCAGCAAAGGCACCGAAATCTTCTAAAGCTCCGGTGAGTAGTCCTCCGTCACC
GAATGGACAGATGGAGCCACCGACGCCATCCGTAGCTCCGGCACCGTCGAAAGAGGGTAACGGCGCCGGTGCAAACAGATTCGCCATTGGTGGGTCTATTGCAGGATTAA
TGATTGCGGCTTTTATCGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTCCACCCTTCTCAATCTTCTCACCCTAGCCTTCCTGCTTATCTCCACCGCTGCCAACTCCCCGGCACCCTCTCCAGCACCCACCGCCGAATCACCAACGTG
GAAATGGACACCTTCTAACGAACCACCCTCCTCTCCACCCACTGCGGAGCCGCCAATGACGACAACGTCTCCACCTTCGCCTACAATATCTCCCCCGGCCACCCCACCGG
AGCTCAGCCCCGTTCCAACATCCTATGCACCCACTTCGCCGCCCATGGCTAACCCACCTACATTGTCGCCGACCGCTCCACCGCCGGCAGTGAAGAGTCCAAGTCATGCC
CCGTCGCCGGCGAAAACAAAAGCACCGGCTCCAGCTCCGTCTAAAACTAGTCCGGCGCCAGCAAAGGCACCGAAATCTTCTAAAGCTCCGGTGAGTAGTCCTCCGTCACC
GAATGGACAGATGGAGCCACCGACGCCATCCGTAGCTCCGGCACCGTCGAAAGAGGGTAACGGCGCCGGTGCAAACAGATTCGCCATTGGTGGGTCTATTGCAGGATTAA
TGATTGCGGCTTTTATCGCTTAA
Protein sequenceShow/hide protein sequence
MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPTSYAPTSPPMANPPTLSPTAPPPAVKSPSHA
PSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIAGLMIAAFIA