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CSPI04G09510 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G09510
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDNA replication complex GINS protein PSF2
Genome locationChr4:7486996..7487477
RNA-Seq ExpressionCSPI04G09510
SyntenyCSPI04G09510
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0031981 - nuclear lumen (cellular component)
InterPro domainsIPR007257 - DNA replication complex GINS protein Psf2
IPR021151 - GINS subunit, domain A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK07564.1 DNA replication complex GINS protein PSF2 isoform X1 [Cucumis melo var. makuwa]1.2e-3795.06Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK
        MAGQSDP LNLFSAEEVEFVAEDEM+EI+PNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSV K
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK

XP_004137154.1 DNA replication complex GINS protein PSF2 [Cucumis sativus]4.9e-3998.77Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK
        MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSV K
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK

XP_008462891.1 PREDICTED: DNA replication complex GINS protein PSF2 isoform X1 [Cucumis melo]1.2e-3795.06Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK
        MAGQSDP LNLFSAEEVEFVAEDEM+EI+PNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSV K
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK

XP_022925113.1 DNA replication complex GINS protein PSF2 isoform X2 [Cucurbita moschata]1.3e-3692.59Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK
        MAGQSDPHL LFSAEE+EFVAEDEMVEI+PNMRMDSL+LICGDYGPFYPQIATEVPLWLAIALKKRGKCAIR PEWMSV K
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK

XP_038905117.1 DNA replication complex GINS protein PSF2 isoform X1 [Benincasa hispida]3.2e-3896.3Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK
        MAGQSDPHLNLFSAEEVEFVAEDEMVEI+PNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIR PEWMSV K
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK

TrEMBL top hitse value%identityAlignment
A0A0A0KVY8 Sld5 domain-containing protein9.7e-49100Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGKFCLLNRLKLLFCVS
        MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGKFCLLNRLKLLFCVS
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGKFCLLNRLKLLFCVS

A0A1S4E3Y0 DNA replication complex GINS protein PSF25.9e-3895.06Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK
        MAGQSDP LNLFSAEEVEFVAEDEM+EI+PNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSV K
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK

A0A5D3C8I7 DNA replication complex GINS protein PSF2 isoform X15.9e-3895.06Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK
        MAGQSDP LNLFSAEEVEFVAEDEM+EI+PNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSV K
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK

A0A6J1HN13 DNA replication complex GINS protein PSF26.5e-3792.59Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK
        MAGQSDPHL LFSAEE+EFVAEDEMVEI+PNMRMDSL+LICGDYGPFYPQIATEVPLWLAIALKKRGKCAIR PEWMSV K
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK

A0A6J1HPD8 DNA replication complex GINS protein PSF26.5e-3792.59Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK
        MAGQSDPHL LFSAEE+EFVAEDEMVEI+PNMRMDSL+LICGDYGPFYPQIATEVPLWLAIALKKRGKCAIR PEWMSV K
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK

SwissProt top hitse value%identityAlignment
Q54BL9 Probable DNA replication complex GINS protein PSF21.6e-1650Show/hide
Query:  EVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK
        ++EF+AED  + ++PN +M+SL  + G+YGPF P    E+PLWLAI+LKK+ KC I  P+WM+  K
Subjt:  EVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK

Q7ZT46 DNA replication complex GINS protein PSF22.5e-1760.29Show/hide
Query:  AEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK
        A EVEF+AE E V +IPN  +D ++LI GD GPF P +  EVPLWLAI LK+R KC I  PEWM V K
Subjt:  AEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK

Q9C7A8 DNA replication complex GINS protein PSF23.1e-2868.35Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSV
        MAGQ+DPH++LFS +EVEF+AEDE+VEI+PNM M+ L+ I GD+G F PQI T+VPLWLA+ALK+RGKC  R P WMSV
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSV

Q9D600 DNA replication complex GINS protein PSF25.5e-1758.82Show/hide
Query:  AEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK
        A EVEF+AE E+V IIPN  +D ++LI GD GPF P +  +VPLWLAI LK+R KC +  PEWM V K
Subjt:  AEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK

Q9Y248 DNA replication complex GINS protein PSF22.5e-1760.29Show/hide
Query:  AEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK
        A EVEF+AE E+V IIPN  +D ++LI GD GPF P +  EVPLWLAI LK+R KC +  PEWM V K
Subjt:  AEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGK

Arabidopsis top hitse value%identityAlignment
AT3G12530.1 PSF22.2e-2968.35Show/hide
Query:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSV
        MAGQ+DPH++LFS +EVEF+AEDE+VEI+PNM M+ L+ I GD+G F PQI T+VPLWLA+ALK+RGKC  R P WMSV
Subjt:  MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSV

AT3G12530.2 PSF24.2e-2066.67Show/hide
Query:  VAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSV
        +AEDE+VEI+PNM M+ L+ I GD+G F PQI T+VPLWLA+ALK+RGKC  R P WMSV
Subjt:  VAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGTCAATCAGATCCTCACCTGAACCTATTTTCTGCAGAAGAGGTGGAGTTTGTAGCTGAAGATGAAATGGTGGAGATTATTCCCAATATGAGAATGGATTCTCT
GCATTTGATCTGTGGGGATTATGGTCCATTCTATCCCCAAATAGCAACTGAAGTTCCATTGTGGCTAGCGATTGCTCTGAAAAAAAGAGGGAAATGTGCAATTAGGACTC
CAGAGTGGATGTCAGTGGGTAAGTTTTGTTTGTTAAATAGGTTGAAGCTTCTTTTCTGTGTGTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGTCAATCAGATCCTCACCTGAACCTATTTTCTGCAGAAGAGGTGGAGTTTGTAGCTGAAGATGAAATGGTGGAGATTATTCCCAATATGAGAATGGATTCTCT
GCATTTGATCTGTGGGGATTATGGTCCATTCTATCCCCAAATAGCAACTGAAGTTCCATTGTGGCTAGCGATTGCTCTGAAAAAAAGAGGGAAATGTGCAATTAGGACTC
CAGAGTGGATGTCAGTGGGTAAGTTTTGTTTGTTAAATAGGTTGAAGCTTCTTTTCTGTGTGTCATAA
Protein sequenceShow/hide protein sequence
MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGKFCLLNRLKLLFCVS