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CSPI04G09570 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G09570
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationChr4:7537568..7538374
RNA-Seq ExpressionCSPI04G09570
SyntenyCSPI04G09570
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646831.1 hypothetical protein Csa_018324 [Cucumis sativus]2.5e-1980Show/hide
Query:  EEVDFSNPLDIVRLSQVMKDEGFEEDSFSSKFDYLLPSNSIPSTQRNPYELSERLFKLLQQKPI-PSLRN
        E  D SN LDIVRLSQVMKD+GF E SFSSKFDYLLPSNSIPSTQRNPYELSERLFK L Q+PI P L++
Subjt:  EEVDFSNPLDIVRLSQVMKDEGFEEDSFSSKFDYLLPSNSIPSTQRNPYELSERLFKLLQQKPI-PSLRN

KAE8649297.1 hypothetical protein Csa_015271, partial [Cucumis sativus]3.3e-4064.2Show/hide
Query:  LDIVRLSQVMKDEGFEEDSFSSKFDYLLPSNSIPSTQRNPYELSERLFKLLQQKPIPSLRNCNASSDSGNSSLQHPANVSSVSKQWAEDNWKSENSKGRS
        +DIVR++QVMK+EGFEE S SS F+ +LP+NSIPSTQRNP++LSERL   L Q+   + R C ASSDSG S    P   SSV  Q AE  WKSEN K RS
Subjt:  LDIVRLSQVMKDEGFEEDSFSSKFDYLLPSNSIPSTQRNPYELSERLFKLLQQKPIPSLRNCNASSDSGNSSLQHPANVSSVSKQWAEDNWKSENSKGRS

Query:  KSEPPVRRNSAFPPKETSFNFIPFKKSLVGDQQSLICSKKDNSN-VSMIKSASKNLISTKAN
        KSE P RR   FPPKETSFN IPF+KSL G QQS ICS KDN N VS  KSA K+LI TKAN
Subjt:  KSEPPVRRNSAFPPKETSFNFIPFKKSLVGDQQSLICSKKDNSN-VSMIKSASKNLISTKAN

KAE8649313.1 hypothetical protein Csa_014975, partial [Cucumis sativus]2.5e-12896.84Show/hide
Query:  DIVRLSQVMKDEGFEEDSFSSKFDYLLPSNSIPSTQRNPYELSERLFKLLQQKPIPSLRNCNASSDSGNSSLQHPANVSSVSKQWAEDNWKSENSKGRSK
        DIVRLSQVMKDEGFEEDSFSSKFDYLLPSNSIPSTQRNPYE SERLFKLLQQKPIPSLRNCNASSDSGNSSLQHPANVSSVSKQWAEDN KSENSK RSK
Subjt:  DIVRLSQVMKDEGFEEDSFSSKFDYLLPSNSIPSTQRNPYELSERLFKLLQQKPIPSLRNCNASSDSGNSSLQHPANVSSVSKQWAEDNWKSENSKGRSK

Query:  SEPPVRRNSAFPPKETSFNFIPFKKSLVGDQQSLICSKKDNSNVSMIKSASKNLISTKANDKSNKVQMGATFTLPENEKLLLQKKEKGAEDSCVINLVGP
        SEPP+RRNSAFPPKETSFNFIPFKKSLVGDQQSL CS KDNSNVSMIKSASKNLISTKANDKSNKVQMGATFTLPENEKLLL+KKEKGAEDSCVINLVGP
Subjt:  SEPPVRRNSAFPPKETSFNFIPFKKSLVGDQQSLICSKKDNSNVSMIKSASKNLISTKANDKSNKVQMGATFTLPENEKLLLQKKEKGAEDSCVINLVGP

Query:  RLLPTSSNFENKACEKSKNGEQRSPISKSKIKKKAAVFFLLITATPASQSTKK
        RLLPTS+NFENKACEKSKNGEQRSPISKSKIKKKAAVFFLLITATPASQSTKK
Subjt:  RLLPTSSNFENKACEKSKNGEQRSPISKSKIKKKAAVFFLLITATPASQSTKK

KAE8653570.1 hypothetical protein Csa_007659, partial [Cucumis sativus]5.1e-4164.63Show/hide
Query:  DIVRLSQVMKDEGFEEDSFSSKFDYLLPSNSIPSTQRNPYELSERLFKLLQQKPIPSLRNCNASSDSGNSSLQHPANVSSVSKQWAEDNWKSENSKGRSK
        DIVR++QVMKDEGFEE SFSS F+ LLP+NSIP TQRNP++LSERL   L Q+   +   C ASSDSG S    PA  SSVS Q AE  WKSEN K  SK
Subjt:  DIVRLSQVMKDEGFEEDSFSSKFDYLLPSNSIPSTQRNPYELSERLFKLLQQKPIPSLRNCNASSDSGNSSLQHPANVSSVSKQWAEDNWKSENSKGRSK

Query:  SEPPVRRNSAFPPKETSFNFIPFKKSLVGDQQSLICSKKDNSN-VSMIKSASKNLISTKANDKS
        SE P RR   FPPK+TSFN IPF+KSL G QQS ICS KDN N VS  KSA+K+LI+TKAN+ S
Subjt:  SEPPVRRNSAFPPKETSFNFIPFKKSLVGDQQSLICSKKDNSN-VSMIKSASKNLISTKANDKS

TYK16775.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.1e-1652.46Show/hide
Query:  DFSNPLDIVRLSQVMKDEGFEEDSFSSKFDYLLPSNSIPSTQRNPYELSERLFKLLQQKPIPSLRN-CNASSD----SGNSSLQ------HPANVSSVSK
        +FSN LDIVRLSQVMKDEG  +   + KFDYLLPSNSIPS QRNPYELSERLFK L+Q+P P LRN C+  +      G+ SL+      +P  VSS   
Subjt:  DFSNPLDIVRLSQVMKDEGFEEDSFSSKFDYLLPSNSIPSTQRNPYELSERLFKLLQQKPIPSLRN-CNASSD----SGNSSLQ------HPANVSSVSK

Query:  QWAEDNWKSENSKGRSKSEPPV
        Q    N K E        +P V
Subjt:  QWAEDNWKSENSKGRSKSEPPV

TrEMBL top hitse value%identityAlignment
A0A5A7SLN9 Retrotransposable element Tf25.5e-1752.46Show/hide
Query:  DFSNPLDIVRLSQVMKDEGFEEDSFSSKFDYLLPSNSIPSTQRNPYELSERLFKLLQQKPIPSLRN-CNASSD----SGNSSLQ------HPANVSSVSK
        +FSN LDIVRLSQVMKDEG  +   + KFDYLLPSNSIPS QRNPYELSERLFK L+Q+P P LRN C+  +      G+ SL+      +P  VSS   
Subjt:  DFSNPLDIVRLSQVMKDEGFEEDSFSSKFDYLLPSNSIPSTQRNPYELSERLFKLLQQKPIPSLRN-CNASSD----SGNSSLQ------HPANVSSVSK

Query:  QWAEDNWKSENSKGRSKSEPPV
        Q    N K E        +P V
Subjt:  QWAEDNWKSENSKGRSKSEPPV

A0A5D3CZ35 DNA/RNA polymerases superfamily protein5.5e-1752.46Show/hide
Query:  DFSNPLDIVRLSQVMKDEGFEEDSFSSKFDYLLPSNSIPSTQRNPYELSERLFKLLQQKPIPSLRN-CNASSD----SGNSSLQ------HPANVSSVSK
        +FSN LDIVRLSQVMKDEG  +   + KFDYLLPSNSIPS QRNPYELSERLFK L+Q+P P LRN C+  +      G+ SL+      +P  VSS   
Subjt:  DFSNPLDIVRLSQVMKDEGFEEDSFSSKFDYLLPSNSIPSTQRNPYELSERLFKLLQQKPIPSLRN-CNASSD----SGNSSLQ------HPANVSSVSK

Query:  QWAEDNWKSENSKGRSKSEPPV
        Q    N K E        +P V
Subjt:  QWAEDNWKSENSKGRSKSEPPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGATGAAGGTTTTGAGGAAGTCGATTTTTCTAATCCTTTAGATATTGTCAGATTAAGCCAAGTTATGAAGGACGAAGGCTTCGAGGAAGATTCATTTAGCTCCAA
GTTTGACTATCTCCTTCCTTCGAACTCCATCCCAAGCACACAAAGGAACCCTTATGAGTTGTCTGAAAGGCTGTTCAAACTTCTTCAACAGAAACCAATACCATCTCTCC
GGAACTGCAATGCATCGTCGGATTCTGGGAATTCTTCCCTTCAACATCCGGCTAATGTTAGTTCCGTTAGTAAACAGTGGGCAGAAGACAATTGGAAGTCTGAGAATTCC
AAGGGCCGTTCAAAATCAGAACCACCAGTCAGGAGAAACTCGGCCTTCCCGCCAAAGGAAACTTCTTTTAATTTTATTCCATTTAAAAAATCACTTGTAGGAGACCAGCA
GTCACTTATATGTAGTAAAAAAGATAATAGTAATGTTTCTATGATTAAGAGTGCCAGCAAGAATTTAATCTCCACGAAGGCCAATGATAAAAGTAACAAAGTTCAGATGG
GAGCTACATTTACTCTGCCAGAAAATGAAAAGTTGTTATTACAGAAGAAAGAGAAGGGTGCGGAAGACAGCTGTGTTATCAATTTAGTGGGTCCCAGGCTCCTTCCAACG
TCTTCTAATTTTGAAAATAAGGCATGTGAGAAGTCAAAAAATGGAGAGCAAAGGTCACCTATCTCTAAAAGTAAAATTAAAAAAAAAGCAGCTGTATTTTTCCTATTGAT
AACAGCAACTCCAGCAAGTCAGTCGACAAAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGATGAAGGTTTTGAGGAAGTCGATTTTTCTAATCCTTTAGATATTGTCAGATTAAGCCAAGTTATGAAGGACGAAGGCTTCGAGGAAGATTCATTTAGCTCCAA
GTTTGACTATCTCCTTCCTTCGAACTCCATCCCAAGCACACAAAGGAACCCTTATGAGTTGTCTGAAAGGCTGTTCAAACTTCTTCAACAGAAACCAATACCATCTCTCC
GGAACTGCAATGCATCGTCGGATTCTGGGAATTCTTCCCTTCAACATCCGGCTAATGTTAGTTCCGTTAGTAAACAGTGGGCAGAAGACAATTGGAAGTCTGAGAATTCC
AAGGGCCGTTCAAAATCAGAACCACCAGTCAGGAGAAACTCGGCCTTCCCGCCAAAGGAAACTTCTTTTAATTTTATTCCATTTAAAAAATCACTTGTAGGAGACCAGCA
GTCACTTATATGTAGTAAAAAAGATAATAGTAATGTTTCTATGATTAAGAGTGCCAGCAAGAATTTAATCTCCACGAAGGCCAATGATAAAAGTAACAAAGTTCAGATGG
GAGCTACATTTACTCTGCCAGAAAATGAAAAGTTGTTATTACAGAAGAAAGAGAAGGGTGCGGAAGACAGCTGTGTTATCAATTTAGTGGGTCCCAGGCTCCTTCCAACG
TCTTCTAATTTTGAAAATAAGGCATGTGAGAAGTCAAAAAATGGAGAGCAAAGGTCACCTATCTCTAAAAGTAAAATTAAAAAAAAAGCAGCTGTATTTTTCCTATTGAT
AACAGCAACTCCAGCAAGTCAGTCGACAAAGAAGTAA
Protein sequenceShow/hide protein sequence
MKDEGFEEVDFSNPLDIVRLSQVMKDEGFEEDSFSSKFDYLLPSNSIPSTQRNPYELSERLFKLLQQKPIPSLRNCNASSDSGNSSLQHPANVSSVSKQWAEDNWKSENS
KGRSKSEPPVRRNSAFPPKETSFNFIPFKKSLVGDQQSLICSKKDNSNVSMIKSASKNLISTKANDKSNKVQMGATFTLPENEKLLLQKKEKGAEDSCVINLVGPRLLPT
SSNFENKACEKSKNGEQRSPISKSKIKKKAAVFFLLITATPASQSTKK