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CSPI04G09760 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G09760
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionbiogenesis of lysosome-related organelles complex 1 subunit 2
Genome locationChr4:7752272..7754965
RNA-Seq ExpressionCSPI04G09760
SyntenyCSPI04G09760
Gene Ontology termsNA
InterPro domainsIPR019269 - Biogenesis of lysosome-related organelles complex-1, subunit 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607085.1 Biogenesis of lysosome-related organelles complex 1 subunit 2, partial [Cucurbita argyrosperma subsp. sororia]4.6e-5090.08Show/hide
Query:  MAQKEE-RLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI
        MA+KEE +LPN DELAESLNEFFTSVSEMIKSDLLGSSNQL LLE+MN+RVAEEYKG GDVASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVI
Subjt:  MAQKEE-RLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI

Query:  SMLDKHVSMLESKVLSVCQNT
        SMLDKH+SMLESKVLSVCQN+
Subjt:  SMLDKHVSMLESKVLSVCQNT

XP_004137147.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis sativus]3.0e-5799.17Show/hide
Query:  MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MAQKEERLPNRD+LAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
Subjt:  MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSVCQNTP
        MLDKHVSMLESKVLSVCQNTP
Subjt:  MLDKHVSMLESKVLSVCQNTP

XP_008455567.1 PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis melo]5.6e-5697.52Show/hide
Query:  MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMN RVAEEYKG+GDVASGMRVFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVIS
Subjt:  MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSVCQNTP
        MLDKHVSMLESKVLSVCQNTP
Subjt:  MLDKHVSMLESKVLSVCQNTP

XP_022949044.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucurbita moschata]2.7e-5090.91Show/hide
Query:  MAQKEE-RLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI
        MA+KEE +LPN DELAESLNEFFTSVSEMIKSDLLGSSNQL LLE+MNLRVAEEYKG GDVASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVI
Subjt:  MAQKEE-RLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI

Query:  SMLDKHVSMLESKVLSVCQNT
        SMLDKH+SMLESKVLSVCQN+
Subjt:  SMLDKHVSMLESKVLSVCQNT

XP_038880795.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Benincasa hispida]4.8e-5596.69Show/hide
Query:  MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MAQKEE+ PNRDELAESLNEFFTSVSEMIKSDLLGSSNQL LLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVIS
Subjt:  MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSVCQNTP
        MLDKHVSMLESKVLSVCQNTP
Subjt:  MLDKHVSMLESKVLSVCQNTP

TrEMBL top hitse value%identityAlignment
A0A0A0KW18 Uncharacterized protein1.4e-5799.17Show/hide
Query:  MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MAQKEERLPNRD+LAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
Subjt:  MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSVCQNTP
        MLDKHVSMLESKVLSVCQNTP
Subjt:  MLDKHVSMLESKVLSVCQNTP

A0A1S3C0T0 biogenesis of lysosome-related organelles complex 1 subunit 22.7e-5697.52Show/hide
Query:  MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMN RVAEEYKG+GDVASGMRVFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVIS
Subjt:  MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSVCQNTP
        MLDKHVSMLESKVLSVCQNTP
Subjt:  MLDKHVSMLESKVLSVCQNTP

A0A6J1GBP4 biogenesis of lysosome-related organelles complex 1 subunit 21.3e-5090.91Show/hide
Query:  MAQKEE-RLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI
        MA+KEE +LPN DELAESLNEFFTSVSEMIKSDLLGSSNQL LLE+MNLRVAEEYKG GDVASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVI
Subjt:  MAQKEE-RLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI

Query:  SMLDKHVSMLESKVLSVCQNT
        SMLDKH+SMLESKVLSVCQN+
Subjt:  SMLDKHVSMLESKVLSVCQNT

A0A6J1KEZ0 biogenesis of lysosome-related organelles complex 1 subunit 21.3e-5090.91Show/hide
Query:  MAQKEE-RLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI
        MA+KEE +LPN DELAESLNEFFTSVSEMIKSDLLGSSNQL LLE+MNLRVAEEYKG GDVASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVI
Subjt:  MAQKEE-RLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI

Query:  SMLDKHVSMLESKVLSVCQNT
        SMLDKH+SMLESKVLSVCQN+
Subjt:  SMLDKHVSMLESKVLSVCQNT

W9R9H2 Uncharacterized protein2.0e-3872.65Show/hide
Query:  MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MA+K ++ P+RDELAESLN+ FTSV  M+KS+L G++NQLELLE+MNLRV EEYKG+GDVASG+RVFVEQLKSKSG FDEY  +IE I+ QVTEFEAVIS
Subjt:  MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSVC
        MLD++VS LESK+ S C
Subjt:  MLDKHVSMLESKVLSVC

SwissProt top hitse value%identityAlignment
F4K657 Biogenesis of lysosome-related organelles complex 1 subunit 22.7e-3265.38Show/hide
Query:  NRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSML
        +RD+LAESL   FTSVS M+KS+L G++N L+LLE+MNLRVA EY   GDVA+G+RVF EQ+KSKSGG DE++ Q++ IE QV+EFEAVIS+LD++VS+L
Subjt:  NRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSML

Query:  ESKV
        ESK+
Subjt:  ESKV

Q32WR5 Biogenesis of lysosome-related organelles complex-1 subunit 21.6e-0527.52Show/hide
Query:  KEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD
        +E + P   ++ E   + F+ ++  +  +L  +S   +LLE MN   + +Y    D+A  +   ++ L  K  G   Y++QI  IE QV   E     LD
Subjt:  KEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD

Query:  KHVSMLESK
         +   LE+K
Subjt:  KHVSMLESK

Q4R7C8 Biogenesis of lysosome-related organelles complex 1 subunit 29.5e-0627.52Show/hide
Query:  KEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD
        +E + P   ++ E   + F+ ++  +  +L  +S   +LLE MN   + +Y    D+A  +   ++ L  K  G   Y++QI  IE QV   E     LD
Subjt:  KEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD

Query:  KHVSMLESK
         +   LE+K
Subjt:  KHVSMLESK

Q54Y67 Biogenesis of lysosome-related organelles complex 1 subunit 24.4e-1133.94Show/hide
Query:  LPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVS
        LP  ++L  S  E FT VS  IKS+L  + +   LL +MN   + +Y+   +V  G+ VF+  LK K   F  Y ++I +++  VT+ E  + +LD++  
Subjt:  LPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVS

Query:  MLESKVLSV
         LE KV ++
Subjt:  MLESKVLSV

Q6QNY1 Biogenesis of lysosome-related organelles complex 1 subunit 29.5e-0627.52Show/hide
Query:  KEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD
        +E + P   ++ E   + F+ ++  +  +L  +S   +LLE MN   + +Y    D+A  +   ++ L  K  G   Y++QI  IE QV   E     LD
Subjt:  KEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD

Query:  KHVSMLESK
         +   LE+K
Subjt:  KHVSMLESK

Arabidopsis top hitse value%identityAlignment
AT5G49550.1 Putative homolog of mammalian BLOC-1 Subunit 2. Protein - protein interaction with BLOS1.1.9e-3365.38Show/hide
Query:  NRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSML
        +RD+LAESL   FTSVS M+KS+L G++N L+LLE+MNLRVA EY   GDVA+G+RVF EQ+KSKSGG DE++ Q++ IE QV+EFEAVIS+LD++VS+L
Subjt:  NRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSML

Query:  ESKV
        ESK+
Subjt:  ESKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCAGAAAGAGGAGCGATTACCGAACAGAGACGAACTCGCCGAGTCGCTTAATGAATTCTTCACCAGCGTGTCGGAAATGATCAAATCGGACCTTCTTGGATCAAG
CAATCAGCTGGAACTTTTAGAGAGAATGAACTTGAGGGTGGCTGAAGAGTACAAAGGTTTTGGGGATGTGGCTTCTGGAATGAGGGTTTTTGTGGAGCAGTTGAAGTCAA
AGAGTGGTGGGTTTGACGAGTATATAAACCAAATTGAGAAGATAGAGCATCAGGTGACCGAATTTGAAGCTGTAATTTCAATGCTTGATAAGCATGTTTCCATGTTGGAG
TCTAAAGTGTTGTCTGTTTGTCAAAACACGCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATCTACTTGACTGTTGCTCTAACTCGTCGTCCAAGGTTCAGCAGCTGTTCTGTATCCCAACGAGCCGACGGCGATTGATCACAATTCAACCAACAAAGACACAAGTTTCA
CGGCCTGTGAAACCCTATTTGCAAGACTTACGGTTTACATCTTGTTTCATGGCCCAGAAAGAGGAGCGATTACCGAACAGAGACGAACTCGCCGAGTCGCTTAATGAATT
CTTCACCAGCGTGTCGGAAATGATCAAATCGGACCTTCTTGGATCAAGCAATCAGCTGGAACTTTTAGAGAGAATGAACTTGAGGGTGGCTGAAGAGTACAAAGGTTTTG
GGGATGTGGCTTCTGGAATGAGGGTTTTTGTGGAGCAGTTGAAGTCAAAGAGTGGTGGGTTTGACGAGTATATAAACCAAATTGAGAAGATAGAGCATCAGGTGACCGAA
TTTGAAGCTGTAATTTCAATGCTTGATAAGCATGTTTCCATGTTGGAGTCTAAAGTGTTGTCTGTTTGTCAAAACACGCCTTAATGAAGAGATGGATTTTTTTCATCTAC
AAATCTCAGATCGCTTCTTTTATGATATCTTATTCATTGGAAGTTGGCGGCG
Protein sequenceShow/hide protein sequence
MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLE
SKVLSVCQNTP