; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G09820 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G09820
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationChr4:7793028..7794293
RNA-Seq ExpressionCSPI04G09820
SyntenyCSPI04G09820
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036574.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.2e-22594.06Show/hide
Query:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIV
        MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPP QKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HDSALFTRQTPNGIV
Subjt:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIV

Query:  LLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLY
        LLLLYVDDMIITGDDPQAIS+LQCYLGKHFEMKDLG L+YFLGLEI+  S GYYLSQAKYASDLL+RSGITDS T STPLDPNVRLTP+DGVPL+DPTLY
Subjt:  LLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLY

Query:  RQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK
        RQLVGSLIYLTVTRPDIA+AVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGL FSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK
Subjt:  RQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK

Query:  QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKA
        QSVVSRSSTESEYRALADATSEL+WLRWLLTDMGAPQTS T LHCDN SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQ IST DQPADIFTKA
Subjt:  QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKA

Query:  LHSPRFTLLLHKLKVVSTLPT
        LHSPRFT L+HKLKVVSTLP+
Subjt:  LHSPRFTLLLHKLKVVSTLPT

KAA0043149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.2e-22594.06Show/hide
Query:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIV
        MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPP QKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HDSALFTRQTPNGIV
Subjt:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIV

Query:  LLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLY
        LLLLYVDDMIITGDDPQAIS+LQCYLGKHFEMKDLG L+YFLGLEI+  S GYYLSQAKYASDLL+RSGITDS T STPLDPNVRLTP+DGVPL+DPTLY
Subjt:  LLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLY

Query:  RQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK
        RQLVGSLIYLTVTRPDIA+AVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGL FSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK
Subjt:  RQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK

Query:  QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKA
        QSVVSRSSTESEYRALADATSEL+WLRWLLTDMGAPQTS T LHCDN SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQ IST DQPADIFTKA
Subjt:  QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKA

Query:  LHSPRFTLLLHKLKVVSTLPT
        LHSPRFT L+HKLKVVSTLP+
Subjt:  LHSPRFTLLLHKLKVVSTLPT

KAA0058316.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.2e-22393.11Show/hide
Query:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIV
        MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPP QKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HDSALFTRQTPNGIV
Subjt:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIV

Query:  LLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLY
        LLLLYVDDMIITGDDPQAIS+LQCYLGKHFEMKDLG L+YF+GLEI+  S GYYLSQAKYASDLL+RSGITDS T STPLDPNVRLTP+DGVPL+DPTLY
Subjt:  LLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLY

Query:  RQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK
        RQLVGSLIYLTVTRPDIA+AVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGL FSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK
Subjt:  RQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK

Query:  QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKA
        QSVVSRSSTESEYRALADATSEL+WLRWLLTDM APQTS   LHCDN SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQ IST DQPADIFTKA
Subjt:  QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKA

Query:  LHSPRFTLLLHKLKVVSTLPT
        LHSPRFT L+HKLKV STLP+
Subjt:  LHSPRFTLLLHKLKVVSTLPT

KAA0065380.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.2e-22594.06Show/hide
Query:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIV
        MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPP QKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HDSALFTRQTPNGIV
Subjt:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIV

Query:  LLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLY
        LLLLYVDDMIITGDDPQAIS+LQCYLGKHFEMKDLG L+YFLGLEI+  S GYYLSQAKYASDLL+RSGITDS T STPLDPNVRLTP+DGVPL+DPTLY
Subjt:  LLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLY

Query:  RQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK
        RQLVGSLIYLTVTRPDIA+AVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGL FSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK
Subjt:  RQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK

Query:  QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKA
        QSVVSRSSTESEYRALADATSEL+WLRWLLTDMGAPQTS T LHCDN SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQ IST DQPADIFTKA
Subjt:  QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKA

Query:  LHSPRFTLLLHKLKVVSTLPT
        LHSPRFT L+HKLKVVSTLP+
Subjt:  LHSPRFTLLLHKLKVVSTLPT

TYK12316.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.2e-22594.06Show/hide
Query:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIV
        MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPP QKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HDSALFTRQTPNGIV
Subjt:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIV

Query:  LLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLY
        LLLLYVDDMIITGDDPQAIS+LQCYLGKHFEMKDLG L+YFLGLEI+  S GYYLSQAKYASDLL+RSGITDS T STPLDPNVRLTP+DGVPL+DPTLY
Subjt:  LLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLY

Query:  RQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK
        RQLVGSLIYLTVTRPDIA+AVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGL FSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK
Subjt:  RQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK

Query:  QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKA
        QSVVSRSSTESEYRALADATSEL+WLRWLLTDMGAPQTS T LHCDN SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQ IST DQPADIFTKA
Subjt:  QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKA

Query:  LHSPRFTLLLHKLKVVSTLPT
        LHSPRFT L+HKLKVVSTLP+
Subjt:  LHSPRFTLLLHKLKVVSTLPT

TrEMBL top hitse value%identityAlignment
A0A5A7SZ66 Retrovirus-related Pol polyprotein from transposon TNT 1-945.6e-22694.06Show/hide
Query:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIV
        MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPP QKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HDSALFTRQTPNGIV
Subjt:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIV

Query:  LLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLY
        LLLLYVDDMIITGDDPQAIS+LQCYLGKHFEMKDLG L+YFLGLEI+  S GYYLSQAKYASDLL+RSGITDS T STPLDPNVRLTP+DGVPL+DPTLY
Subjt:  LLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLY

Query:  RQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK
        RQLVGSLIYLTVTRPDIA+AVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGL FSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK
Subjt:  RQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK

Query:  QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKA
        QSVVSRSSTESEYRALADATSEL+WLRWLLTDMGAPQTS T LHCDN SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQ IST DQPADIFTKA
Subjt:  QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKA

Query:  LHSPRFTLLLHKLKVVSTLPT
        LHSPRFT L+HKLKVVSTLP+
Subjt:  LHSPRFTLLLHKLKVVSTLPT

A0A5A7UVX4 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-22393.11Show/hide
Query:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIV
        MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPP QKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HDSALFTRQTPNGIV
Subjt:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIV

Query:  LLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLY
        LLLLYVDDMIITGDDPQAIS+LQCYLGKHFEMKDLG L+YF+GLEI+  S GYYLSQAKYASDLL+RSGITDS T STPLDPNVRLTP+DGVPL+DPTLY
Subjt:  LLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLY

Query:  RQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK
        RQLVGSLIYLTVTRPDIA+AVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGL FSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK
Subjt:  RQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK

Query:  QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKA
        QSVVSRSSTESEYRALADATSEL+WLRWLLTDM APQTS   LHCDN SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQ IST DQPADIFTKA
Subjt:  QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKA

Query:  LHSPRFTLLLHKLKVVSTLPT
        LHSPRFT L+HKLKV STLP+
Subjt:  LHSPRFTLLLHKLKVVSTLPT

A0A5A7VDW0 Retrovirus-related Pol polyprotein from transposon TNT 1-945.6e-22694.06Show/hide
Query:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIV
        MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPP QKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HDSALFTRQTPNGIV
Subjt:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIV

Query:  LLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLY
        LLLLYVDDMIITGDDPQAIS+LQCYLGKHFEMKDLG L+YFLGLEI+  S GYYLSQAKYASDLL+RSGITDS T STPLDPNVRLTP+DGVPL+DPTLY
Subjt:  LLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLY

Query:  RQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK
        RQLVGSLIYLTVTRPDIA+AVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGL FSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK
Subjt:  RQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK

Query:  QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKA
        QSVVSRSSTESEYRALADATSEL+WLRWLLTDMGAPQTS T LHCDN SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQ IST DQPADIFTKA
Subjt:  QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKA

Query:  LHSPRFTLLLHKLKVVSTLPT
        LHSPRFT L+HKLKVVSTLP+
Subjt:  LHSPRFTLLLHKLKVVSTLPT

A0A5D3DG18 Retrovirus-related Pol polyprotein from transposon TNT 1-945.6e-22694.06Show/hide
Query:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIV
        MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPP QKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HDSALFTRQTPNGIV
Subjt:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIV

Query:  LLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLY
        LLLLYVDDMIITGDDPQAIS+LQCYLGKHFEMKDLG L+YFLGLEI+  S GYYLSQAKYASDLL+RSGITDS T STPLDPNVRLTP+DGVPL+DPTLY
Subjt:  LLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLY

Query:  RQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK
        RQLVGSLIYLTVTRPDIA+AVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGL FSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK
Subjt:  RQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK

Query:  QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKA
        QSVVSRSSTESEYRALADATSEL+WLRWLLTDMGAPQTS T LHCDN SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQ IST DQPADIFTKA
Subjt:  QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKA

Query:  LHSPRFTLLLHKLKVVSTLPT
        LHSPRFT L+HKLKVVSTLP+
Subjt:  LHSPRFTLLLHKLKVVSTLPT

A0A5D3DWU7 Retrovirus-related Pol polyprotein from transposon TNT 1-945.6e-22694.06Show/hide
Query:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIV
        MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPP QKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HDSALFTRQTPNGIV
Subjt:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIV

Query:  LLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLY
        LLLLYVDDMIITGDDPQAIS+LQCYLGKHFEMKDLG L+YFLGLEI+  S GYYLSQAKYASDLL+RSGITDS T STPLDPNVRLTP+DGVPL+DPTLY
Subjt:  LLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLY

Query:  RQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK
        RQLVGSLIYLTVTRPDIA+AVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGL FSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK
Subjt:  RQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKK

Query:  QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKA
        QSVVSRSSTESEYRALADATSEL+WLRWLLTDMGAPQTS T LHCDN SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQ IST DQPADIFTKA
Subjt:  QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKA

Query:  LHSPRFTLLLHKLKVVSTLPT
        LHSPRFT L+HKLKVVSTLP+
Subjt:  LHSPRFTLLLHKLKVVSTLPT

SwissProt top hitse value%identityAlignment
P04146 Copia protein8.2e-7338.48Show/hide
Query:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALF--TRQTPNG
        ++S R +L++       + QMDVK AFLNGTL EE+YM+ P G +     VC L +A+YGLKQA R WF  F   + +  F +S  D  ++   +   N 
Subjt:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALF--TRQTPNG

Query:  IVLLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDP-
         + +LLYVDD++I   D   ++  + YL + F M DL  + +F+G+ I    D  YLSQ+ Y   +LS+  + +    STPL   +    Y+ +  D+  
Subjt:  IVLLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDP-

Query:  -TLYRQLVGSLIYLTV-TRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSL--VLSGFSDADWAGDPTDRRSTTGYCFYLGD-A
         T  R L+G L+Y+ + TRPD+  AV+I+S++ +   +  +  + R+LRY+KGT+   L F    +    + G+ D+DWAG   DR+STTGY F + D  
Subjt:  -TLYRQLVGSLIYLTV-TRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSL--VLSGFSDADWAGDPTDRRSTTGYCFYLGD-A

Query:  LISWRSKKQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQ
        LI W +K+Q+ V+ SSTE+EY AL +A  E LWL++LLT +     +   ++ DN+  I IA+N   H+R KHI+   HF R  +Q+N + L+ I T +Q
Subjt:  LISWRSKKQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQ

Query:  PADIFTKALHSPRFTLLLHKL
         ADIFTK L + RF  L  KL
Subjt:  PADIFTKALHSPRFTLLLHKL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.3e-7540.71Show/hide
Query:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQK--VCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSAL-FTRQTPN
        MTS+R++L++AA+    + Q+DVK AFL+G L EE+YM+ P G     +K  VC L ++LYGLKQAPR W+  F S +    +  +  D  + F R + N
Subjt:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQK--VCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSAL-FTRQTPN

Query:  GIVLLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEIT--FVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRL------TPY
          ++LLLYVDDM+I G D   I++L+  L K F+MKDLGP    LG++I     S   +LSQ KY   +L R  + ++   STPL  +++L      T  
Subjt:  GIVLLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEIT--FVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRL------TPY

Query:  DGVPLDDPTLYRQLVGSLIYLTV-TRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFY
        +         Y   VGSL+Y  V TRPDIA AV +VS+F+  P   H+ AV  ILRY++GT G  L F   S  +L G++DAD AGD  +R+S+TGY F 
Subjt:  DGVPLDDPTLYRQLVGSLIYLTV-TRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFY

Query:  LGDALISWRSKKQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSIS
             ISW+SK Q  V+ S+TE+EY A  +   E++WL+  L ++G  Q     ++CD++SAI ++ N ++H RTKHI+   H++R  +   +L +  IS
Subjt:  LGDALISWRSKKQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSIS

Query:  TIDQPADIFTKALHSPRFTL
        T + PAD+ TK +   +F L
Subjt:  TIDQPADIFTKALHSPRFTL

P92519 Uncharacterized mitochondrial protein AtMg008101.8e-5148.21Show/hide
Query:  LLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLYR
        LLLYVDD+++TG     ++ L   L   F MKDLGP+ YFLG++I     G +LSQ KYA  +L+ +G+ D    STPL P    +        DP+ +R
Subjt:  LLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLYR

Query:  QLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQ
         +VG+L YLT+TRPDI++AV+IV Q M  P    F  + R+LRY+KGT+ HGL+    S L +  F D+DWAG  + RRSTTG+C +LG  +ISW +K+Q
Subjt:  QLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQ

Query:  SVVSRSSTESEYRALADATSELLW
          VSRSSTE+EYRALA   +EL W
Subjt:  SVVSRSSTESEYRALADATSELLW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE16.0e-10045.97Show/hide
Query:  TSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQK--VCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGI
        TS+R +L +A  + WP+ Q+DV NAFL GTL+++VYM  PPG     +   VC LR+ALYGLKQAPRAW+    + +  +GF +S  D++LF  Q    I
Subjt:  TSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQK--VCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGI

Query:  VLLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTL
        V +L+YVDD++ITG+DP  +      L + F +KD   L YFLG+E   V  G +LSQ +Y  DLL+R+ +  +   +TP+ P+ +L+ Y G  L DPT 
Subjt:  VLLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTL

Query:  YRQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSK
        YR +VGSL YL  TRPDI++AV+ +SQFM  P   H  A+ RILRY+ GT  HG+     ++L L  +SDADWAGD  D  ST GY  YLG   ISW SK
Subjt:  YRQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSK

Query:  KQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTK
        KQ  V RSSTE+EYR++A+ +SE+ W+  LLT++G   T    ++CDN  A  +  N VFH R KHI  D HF+R+ +QS  L +  +ST DQ AD  TK
Subjt:  KQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTK

Query:  ALHSPRFTLLLHKLKVVSTLPT
         L    F     K+ V    P+
Subjt:  ALHSPRFTLLLHKLKVVSTLPT

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.8e-9744.31Show/hide
Query:  TSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQK--VCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGI
        TS+R +L +A  + WP+ Q+DV NAFL GTL++EVYM  PPG     +   VC LR+A+YGLKQAPRAW+    + +  +GF +S  D++LF  Q    I
Subjt:  TSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQK--VCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGI

Query:  VLLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTL
        + +L+YVDD++ITG+D   +      L + F +K+   L YFLG+E   V  G +LSQ +Y  DLL+R+ +  +   +TP+  + +LT + G  L DPT 
Subjt:  VLLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTL

Query:  YRQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSK
        YR +VGSL YL  TRPD+++AV+ +SQ+M  P   H+ A+ R+LRY+ GT  HG+     ++L L  +SDADWAGD  D  ST GY  YLG   ISW SK
Subjt:  YRQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSK

Query:  KQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTK
        KQ  V RSSTE+EYR++A+ +SEL W+  LLT++G   +    ++CDN  A  +  N VFH R KHI  D HF+R+ +QS  L +  +ST DQ AD  TK
Subjt:  KQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTK

Query:  ALHSPRFTLLLHKLKVVSTLPT
         L    F     K+ V+   P+
Subjt:  ALHSPRFTLLLHKLKVVSTLPT

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 86.8e-9947.67Show/hide
Query:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPP------GTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQ
        +TSV+ +LAI+A   + L Q+D+ NAFLNG L EE+YMK PP      G + P   VC L++++YGLKQA R WF  FS T+   GF  S  D   F + 
Subjt:  MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPP------GTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQ

Query:  TPNGIVLLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPL
        T    + +L+YVDD+II  ++  A+ EL+  L   F+++DLGPL YFLGLEI   + G  + Q KYA DLL  +G+     SS P+DP+V  + + G   
Subjt:  TPNGIVLLLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPL

Query:  DDPTLYRQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALI
         D   YR+L+G L+YL +TR DI+FAV+ +SQF  APR  H  AV++IL YIKGT+G GL +SSQ+ + L  FSDA +      RRST GYC +LG +LI
Subjt:  DDPTLYRQLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALI

Query:  SWRSKKQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPA
        SW+SKKQ VVS+SS E+EYRAL+ AT E++WL     ++  P +  T L CDN +AI IA N VFHERTKHIE+DCH VR           S    D+  
Subjt:  SWRSKKQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPA

Query:  DIFTKAL
        D FT+ L
Subjt:  DIFTKAL

ATMG00240.1 Gag-Pol-related retrotransposon family protein9.1e-1953.16Show/hide
Query:  IYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYC
        +YLT+TRPD+ FAV+ +SQF +A RT    AV ++L Y+KGT+G GL +S+ S L L  F+D+DWA  P  RRS TG+C
Subjt:  IYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYC

ATMG00810.1 DNA/RNA polymerases superfamily protein1.3e-5248.21Show/hide
Query:  LLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLYR
        LLLYVDD+++TG     ++ L   L   F MKDLGP+ YFLG++I     G +LSQ KYA  +L+ +G+ D    STPL P    +        DP+ +R
Subjt:  LLLYVDDMIITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLYR

Query:  QLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQ
         +VG+L YLT+TRPDI++AV+IV Q M  P    F  + R+LRY+KGT+ HGL+    S L +  F D+DWAG  + RRSTTG+C +LG  +ISW +K+Q
Subjt:  QLVGSLIYLTVTRPDIAFAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQ

Query:  SVVSRSSTESEYRALADATSELLW
          VSRSSTE+EYRALA   +EL W
Subjt:  SVVSRSSTESEYRALADATSELLW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTCTGTTCGTAGTCTTTTAGCCATTGCAGCTGCAAAACAGTGGCCCCTCTTACAAATGGATGTTAAAAATGCATTTCTCAATGGAACTCTATCTGAAGAAGTCTA
TATGAAACCACCACCTGGTACTACCCCGCCACATCAGAAAGTATGTCTTCTTCGACGAGCTCTCTATGGTCTCAAACAGGCTCCCCGAGCCTGGTTTGCAACTTTTAGCT
CCACTATTACTCAACTTGGGTTCACTTCCAGCCCTCATGATTCAGCCTTGTTCACCCGCCAGACACCTAATGGTATTGTACTCCTTCTTTTATATGTTGATGACATGATT
ATTACAGGCGATGACCCTCAAGCTATATCTGAATTGCAATGCTACTTGGGAAAGCACTTTGAGATGAAGGATTTAGGACCTCTCAGTTATTTCCTTGGCCTTGAGATCAC
TTTCGTGTCTGATGGTTATTACTTATCTCAAGCTAAATATGCTTCTGACCTACTCAGTCGATCTGGTATTACTGATTCTACAACATCCTCAACACCTCTGGATCCAAATG
TTCGACTTACTCCTTATGATGGTGTTCCCCTTGACGATCCTACTTTGTACCGGCAACTTGTTGGTAGCTTGATTTACTTAACTGTAACTCGCCCTGATATTGCGTTCGCA
GTTCACATAGTCAGTCAATTCATGGCCGCTCCTCGTACTATTCATTTCACTGCTGTCCTTCGGATTCTTCGCTACATTAAAGGCACTTTGGGTCATGGTCTCCACTTCTC
CTCACAGTCTTCTCTGGTTCTCTCTGGATTCTCTGATGCTGATTGGGCAGGAGATCCTACTGATAGAAGATCCACCACTGGCTATTGTTTTTATTTAGGTGATGCTCTTA
TCTCCTGGCGCAGCAAGAAACAATCTGTTGTTTCCCGGTCTAGCACTGAGTCTGAATATCGTGCTCTAGCTGATGCCACTTCAGAATTATTATGGCTTCGTTGGCTTCTT
ACTGATATGGGAGCCCCACAAACATCATCTACTACTCTCCATTGTGATAACCGCAGTGCCATTCAGATTGCACACAATGATGTATTTCATGAACGAACAAAGCACATAGA
GAACGATTGTCATTTTGTTCGTCATCATCTTCAAAGCAACACTCTCCATCTTCAATCTATCTCTACCATTGATCAACCTGCAGATATCTTCACCAAAGCTCTCCATTCTC
CTCGTTTCACTCTGTTACTTCACAAACTCAAGGTGGTTTCTACTCTACCAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGTCTGTTCGTAGTCTTTTAGCCATTGCAGCTGCAAAACAGTGGCCCCTCTTACAAATGGATGTTAAAAATGCATTTCTCAATGGAACTCTATCTGAAGAAGTCTA
TATGAAACCACCACCTGGTACTACCCCGCCACATCAGAAAGTATGTCTTCTTCGACGAGCTCTCTATGGTCTCAAACAGGCTCCCCGAGCCTGGTTTGCAACTTTTAGCT
CCACTATTACTCAACTTGGGTTCACTTCCAGCCCTCATGATTCAGCCTTGTTCACCCGCCAGACACCTAATGGTATTGTACTCCTTCTTTTATATGTTGATGACATGATT
ATTACAGGCGATGACCCTCAAGCTATATCTGAATTGCAATGCTACTTGGGAAAGCACTTTGAGATGAAGGATTTAGGACCTCTCAGTTATTTCCTTGGCCTTGAGATCAC
TTTCGTGTCTGATGGTTATTACTTATCTCAAGCTAAATATGCTTCTGACCTACTCAGTCGATCTGGTATTACTGATTCTACAACATCCTCAACACCTCTGGATCCAAATG
TTCGACTTACTCCTTATGATGGTGTTCCCCTTGACGATCCTACTTTGTACCGGCAACTTGTTGGTAGCTTGATTTACTTAACTGTAACTCGCCCTGATATTGCGTTCGCA
GTTCACATAGTCAGTCAATTCATGGCCGCTCCTCGTACTATTCATTTCACTGCTGTCCTTCGGATTCTTCGCTACATTAAAGGCACTTTGGGTCATGGTCTCCACTTCTC
CTCACAGTCTTCTCTGGTTCTCTCTGGATTCTCTGATGCTGATTGGGCAGGAGATCCTACTGATAGAAGATCCACCACTGGCTATTGTTTTTATTTAGGTGATGCTCTTA
TCTCCTGGCGCAGCAAGAAACAATCTGTTGTTTCCCGGTCTAGCACTGAGTCTGAATATCGTGCTCTAGCTGATGCCACTTCAGAATTATTATGGCTTCGTTGGCTTCTT
ACTGATATGGGAGCCCCACAAACATCATCTACTACTCTCCATTGTGATAACCGCAGTGCCATTCAGATTGCACACAATGATGTATTTCATGAACGAACAAAGCACATAGA
GAACGATTGTCATTTTGTTCGTCATCATCTTCAAAGCAACACTCTCCATCTTCAATCTATCTCTACCATTGATCAACCTGCAGATATCTTCACCAAAGCTCTCCATTCTC
CTCGTTTCACTCTGTTACTTCACAAACTCAAGGTGGTTTCTACTCTACCAACTTGA
Protein sequenceShow/hide protein sequence
MTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPHQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDSALFTRQTPNGIVLLLLYVDDMI
ITGDDPQAISELQCYLGKHFEMKDLGPLSYFLGLEITFVSDGYYLSQAKYASDLLSRSGITDSTTSSTPLDPNVRLTPYDGVPLDDPTLYRQLVGSLIYLTVTRPDIAFA
VHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELLWLRWLL
TDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQSISTIDQPADIFTKALHSPRFTLLLHKLKVVSTLPT