; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G09900 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G09900
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionU3 small nucleolar ribonucleoprotein protein IMP3
Genome locationChr4:7863694..7866570
RNA-Seq ExpressionCSPI04G09900
SyntenyCSPI04G09900
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005840 - ribosome (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0034457 - Mpp10 complex (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
GO:0030515 - snoRNA binding (molecular function)
InterPro domainsIPR001912 - Ribosomal protein S4/S9, N-terminal
IPR002942 - RNA-binding S4 domain
IPR022801 - Ribosomal protein S4/S9
IPR036986 - RNA-binding S4 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041194.1 U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. makuwa]2.4e-9899.45Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRK+LQYNDQLDDYDAINC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC

TYK23826.1 U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. makuwa]1.2e-9798.91Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFR ELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRK+LQYNDQLDDYDAINC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC

XP_004153543.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Cucumis sativus]1.8e-98100Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC

XP_022955364.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Cucurbita moschata]2.4e-9595.63Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHRE QVMHRYHITGRDDYKKYSS+CRGVQKLV+MLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETV DPAFLVTRNMEDFITWVDSSKIKRK+LQYND+LDD+DA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC

XP_038880355.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Benincasa hispida]3.4e-9797.81Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLV MLKKMN+KDPFRLE+TEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRK+LQYNDQLDDYDAINC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC

TrEMBL top hitse value%identityAlignment
A0A0A0KZG3 S4 RNA-binding domain-containing protein8.8e-99100Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC

A0A5D3BRX0 U3 small nucleolar ribonucleoprotein IMP3-like isoform X11.1e-9899.45Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRK+LQYNDQLDDYDAINC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC

A0A5D3DJI4 U3 small nucleolar ribonucleoprotein IMP3-like isoform X15.7e-9898.91Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFR ELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRK+LQYNDQLDDYDAINC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC

A0A6J1GW22 U3 small nucleolar ribonucleoprotein protein IMP31.2e-9595.63Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHRE QVMHRYHITGRDDYKKYSS+CRGVQKLV+MLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETV DPAFLVTRNMEDFITWVDSSKIKRK+LQYND+LDD+DA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC

A0A6J1J025 U3 small nucleolar ribonucleoprotein protein IMP32.0e-9595.63Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHRE QVMHRYHITGRDDYKKYSS+CRGVQKLV MLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETV DPAFLVTRNMEDFITWVDSSKIKRK+LQYND+LDD+DA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC

SwissProt top hitse value%identityAlignment
O13835 U3 small nucleolar ribonucleoprotein protein imp35.2e-4849.18Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKR-EGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSL-NLCDR
        MR LK HEQKLL+KV+FL +K  +  HR+  VM RYHI+ R++Y+KY+ +C   ++L   L  ++  DPFRL+    LLEKL++MG++P++  + ++ ++
Subjt:  MRKLKFHEQKLLKKVNFLEWKR-EGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSL-NLCDR

Query:  LSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAI
         +VS+ CRRRL  ++ +L+ ++ + EA   IEQGH+RVGP  +TDPA+LVTR++EDF+TW D+SKIKR I +YND+LDDYD +
Subjt:  LSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAI

P32899 U3 small nucleolar ribonucleoprotein protein IMP35.4e-5353.89Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSL-NLCDRL
        +RKLK HEQKLLKKV+FLEWK++ GHR+ QVM  YHI  R+DY KY+ +C  +++L   L  +   DPFR +  + LL+KLY MGV+ T+  + +L +++
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSL-NLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYD
        +VS+ CRRRL  ++ RLK AE +++AV +IEQGH+RVGP  + DPA+LVTRNMED++TWVD+SKIK+ +L+Y +Q+DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYD

Q3T0M3 U3 small nucleolar ribonucleoprotein protein IMP31.5e-5556.67Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRL
        +RKLKFHEQKLLK+V+FL W+  +    E +V+ RY +  R+DY +Y+ L R V++L   L+ + E+DPFR+  +  LL+KLY +G++PTR S  LCD +
Subjt:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYD
        + SSFCRRRL TVL++L+ A+HL+ AV ++EQGH+RVGP+ VTDPAFLVTR+MEDF+TWVDSSKIKR +L+YN++ DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYD

Q921Y2 U3 small nucleolar ribonucleoprotein protein IMP31.8e-5657.22Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRL
        +RKLKFHEQKLLK+V+FL W+  +    E +V+ RY +  R++Y +Y+ L R V++L   L+ + E+DPFR+  +  LL+KLY MG++PTR SL LCD +
Subjt:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYD
        S SSFCRRRL T+L++L+ A+HL+ AV ++EQGH+RVGP+ VTDPAFLVTR+MEDF+TWVDSSKIKR +L+YN++ DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYD

Q9NV31 U3 small nucleolar ribonucleoprotein protein IMP32.0e-5556.67Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRL
        +RKLKFHEQKLLK+V+FL W+  +    E +V+ RY +  R+DY +Y+ L R V++L   L+ + E+D FR+  +  LL+KLY +G++PTR SL LCD +
Subjt:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYD
        + SSFCRRRL TVL++L+ A+HL+ AV ++EQGH+RVGP+ VTDPAFLVTR+MEDF+TWVDSSKIKR +L+YN++ DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYD

Arabidopsis top hitse value%identityAlignment
AT5G15200.1 Ribosomal protein S41.3e-0624.31Show/hide
Query:  WKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQS-LNLCDRLSVSSFCRRRLSTVLVRLKF
        +++E    E +++  Y +  + +  +       ++     L  ++EK P R+   E LL ++   G++   Q+ L+    L+V +F  RRL T++ +   
Subjt:  WKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQS-LNLCDRLSVSSFCRRRLSTVLVRLKF

Query:  AEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSS
        A+ +  +   I Q HIRVG + V  P+F+V  + +  I +  +S
Subjt:  AEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSS

AT5G15750.1 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein2.4e-8077.35Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLK+HE+KL+KKVNFLEWKREG HRE ++ +RYH+  RDDYKKYS LCR VQKL  ++K+M+  DPFR+++T+ LLEKLYNMGVIPTR+SL L +RLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAI
        VSSFCRRRLSTVLV LKFAEH +EAVTYIEQGH+RVGPET+TDPAFLVTRNMEDFITWVDSSKIKRK+L+YND LDDYD +
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAI

AT5G39850.1 Ribosomal protein S41.0e-0626.15Show/hide
Query:  WKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVI-PTRQSLNLCDRLSVSSFCRRRLSTVLVRLKF
        +++E    E +++  Y +  + +  +       ++     L  ++EK+P R+   E LL ++   G++  T+  L+    L+V +F  RRL T++ +   
Subjt:  WKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVI-PTRQSLNLCDRLSVSSFCRRRLSTVLVRLKF

Query:  AEHLREAVTYIEQGHIRVGPETVTDPAFLV
        A+ +  A   I Q HIRVG + V  P+F+V
Subjt:  AEHLREAVTYIEQGHIRVGPETVTDPAFLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAGCTAAAGTTTCACGAGCAGAAGCTTTTGAAGAAGGTTAACTTCTTGGAGTGGAAGAGAGAAGGAGGTCATAGAGAAGCCCAAGTAATGCATCGCTATCACAT
TACTGGACGGGACGATTACAAGAAGTATTCGAGCTTGTGCCGTGGTGTTCAGAAGCTGGTCACAATGCTGAAGAAGATGAACGAGAAAGACCCTTTTCGATTGGAATTGA
CCGAGAAGCTCCTCGAAAAGCTGTACAATATGGGCGTGATACCAACCCGGCAGAGCTTGAATTTATGCGATCGCCTGTCAGTTTCATCCTTTTGCAGACGGAGGCTATCG
ACAGTGTTGGTACGTTTGAAGTTTGCCGAGCATTTGAGGGAAGCTGTTACATACATTGAACAAGGGCATATTAGAGTTGGTCCAGAGACAGTTACTGACCCAGCATTTCT
AGTTACAAGGAATATGGAGGACTTCATAACATGGGTTGATTCATCAAAGATAAAGCGAAAGATTTTACAATACAATGATCAGTTGGATGATTACGATGCTATTAACTGTT
GA
mRNA sequenceShow/hide mRNA sequence
ATTTTTTCACATCACCCACGGTTGGGTTAGGGTTATTGAATCTAATATACAAGAGTGATAAACTGGAGCCAAACAACCCCTTACAAATTGGGTTTAAATTGGGCCACTCC
TACGGCCTCAACTATAATGAAGCTGGGTCCAGTTACTTAGGTCACCCACTTAAACTCGGCCTCAACGACGTAGCTTTACTTTCCCCTCCACACTTACGTTTCTTAGTTTT
AATTTTCTAAACCCTAACGCTAAATCTACTTTCTCTCCTAAGTCTCCGCCGTCGCCATCGCCGCCGGTCCACTTCTCTTTCTCTCTCTTTTGTTAAACAACCCCCATCTT
CATCTCAATCCTCTATCTTGACTCTTCCACACAGCGGTTTTTTGTTCGAACCACACCGACACCTTCTTCAGGATGAGGAAGCTAAAGTTTCACGAGCAGAAGCTTTTGAA
GAAGGTTAACTTCTTGGAGTGGAAGAGAGAAGGAGGTCATAGAGAAGCCCAAGTAATGCATCGCTATCACATTACTGGACGGGACGATTACAAGAAGTATTCGAGCTTGT
GCCGTGGTGTTCAGAAGCTGGTCACAATGCTGAAGAAGATGAACGAGAAAGACCCTTTTCGATTGGAATTGACCGAGAAGCTCCTCGAAAAGCTGTACAATATGGGCGTG
ATACCAACCCGGCAGAGCTTGAATTTATGCGATCGCCTGTCAGTTTCATCCTTTTGCAGACGGAGGCTATCGACAGTGTTGGTACGTTTGAAGTTTGCCGAGCATTTGAG
GGAAGCTGTTACATACATTGAACAAGGGCATATTAGAGTTGGTCCAGAGACAGTTACTGACCCAGCATTTCTAGTTACAAGGAATATGGAGGACTTCATAACATGGGTTG
ATTCATCAAAGATAAAGCGAAAGATTTTACAATACAATGATCAGTTGGATGATTACGATGCTATTAACTGTTGAGATACTGTCCAAGTTTTGTATCCTTTTCATTATTTC
ATCGTGTATGAATCTTTTCTCTGGCACTCTTACTGAAATGGCCAAGTAATGTAGCGTCAGTTTTGCCATTTCTTTTCTAATCAATATATATAATTTTGCATTATATTTTG
TAACAAGCTTGATATCTTAGCTTCATTGATGCCTCGTTGTTGGGGTTGTATGGTTAAATTGCTATTCTAGATTATGTGTTCGTTTCTTTTTTCTTCTGGAATCTACCATT
TTTTAATAAGTGCTTAGTCAATCCATAACGCTC
Protein sequenceShow/hide protein sequence
MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLSVSSFCRRRLS
TVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAINC