; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G09990 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G09990
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNuclear cap-binding protein subunit 2
Genome locationChr4:8026073..8034838
RNA-Seq ExpressionCSPI04G09990
SyntenyCSPI04G09990
Gene Ontology termsGO:0045292 - mRNA cis splicing, via spliceosome (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005846 - nuclear cap binding complex (cellular component)
GO:0000339 - RNA cap binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR027157 - Nuclear cap-binding protein subunit 2
IPR034148 - NCBP2, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570919.1 Nuclear cap-binding protein subunit 2, partial [Cucurbita argyrosperma subsp. sororia]5.5e-13093.23Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDP+KLS+YRDRRF G+QDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSM  V+PQYGKHGGSHG+G RHGRDYH+RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDY+SRRN ++ESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_004137136.1 nuclear cap-binding protein subunit 2 [Cucumis sativus]1.3e-139100Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_008464581.1 PREDICTED: nuclear cap-binding protein subunit 2 [Cucumis melo]5.5e-13898.8Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPTKLS+YRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVM QYGKHGGSHGHG+RHGRDYHHRKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_022986365.1 nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita maxima]7.2e-13092.83Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDP+KLS+YRDRRF G+QDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSM  V+PQYGKHGGSHG+G+RHGRDYH+RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDY+SRRN ++ESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_038900343.1 nuclear cap-binding protein subunit 2 [Benincasa hispida]2.6e-13296Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPTKLS+YRDRRFHG+QDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSM PVM QYGKHGGSHGHG+RHGRDYHHRKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR
        DDRHAHESSKRTSDYESRRN +++SRPEKNPRFRESGDSDEEDDDD+KQR
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR

TrEMBL top hitse value%identityAlignment
A0A0A0KVX7 Nuclear cap-binding protein subunit 21.5e-13696.89Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPG------RGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHH
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP        GGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHH
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPG------RGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHH

Query:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A1S3CLT9 Nuclear cap-binding protein subunit 22.6e-13898.8Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPTKLS+YRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVM QYGKHGGSHGHG+RHGRDYHHRKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1FX36 Nuclear cap-binding protein subunit 27.7e-13092.83Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDP+KLS+YRDRRF G+QDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGS+  V+PQYGKHGGSHG+G RHGRDYH+RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDY+SRRN ++ESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1G5C4 Nuclear cap-binding protein subunit 21.7e-12993.23Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDP+KLS+YRDRRF G+QDEFE AL +STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGT SLGSM PVM Q+G HGGSHGHG RHGRDYHHRKR+RD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSD+ESRRNSN+ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1J7C7 Nuclear cap-binding protein subunit 23.5e-13092.83Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDP+KLS+YRDRRF G+QDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSM  V+PQYGKHGGSHG+G+RHGRDYH+RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDY+SRRN ++ESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

SwissProt top hitse value%identityAlignment
B1WC40 Nuclear cap-binding protein subunit 21.9e-5370.21Show/hide
Query:  KLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDF
        +LS YRD+ F G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR D E+A++YI+GT LDDR IR D+
Subjt:  KLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE
        D GF++GRQ+GRGRSGGQVRDEYR DYD GRGGYGKL QK+
Subjt:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE

B7P877 Nuclear cap-binding protein subunit 28.7e-5468.79Show/hide
Query:  LSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFD
        LS YRD+ F GS+ E E  L+ STT+YVGNMSFYTTEEQ+YELFS+ G++KK+IMGLD+  KTPCGFCFV YY+RED E+A++Y++GT LDDR IR D+D
Subjt:  LSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFD

Query:  WGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKEL
         GF +GRQ+GRG+SGGQVRDEYRTDYD GRGGYGKL+ + +
Subjt:  WGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKEL

Q84L14 Nuclear cap-binding protein subunit 21.7e-9474.6Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPTKLS YRDRRF G+Q+E+E ALQ S TVYVGNMSFYTTEEQ YELFSRAGEI+KIIMGLDKNSKTPCGFCF+LYYSRED EDAVKYISGT+L
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGN--RHGRDYHHRKRY
        DDRPIRVDFDWGF++GRQWGRGRSGGQVRDEYRTDYDPGRGGYGK+VQKELEAQR+LVDYG G+    AP  PQY +     G+G+  R+ RDY  RKRY
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGN--RHGRDYHHRKRY

Query:  RDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR
        R+D+R    SS+R  D E +R++      EKNPRFRE GDSDEEDDD  K+R
Subjt:  RDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR

Q9CQ49 Nuclear cap-binding protein subunit 21.9e-5370.21Show/hide
Query:  KLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDF
        +LS YRD+ F G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR D E+A++YI+GT LDDR IR D+
Subjt:  KLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE
        D GF++GRQ+GRGRSGGQVRDEYR DYD GRGGYGKL QK+
Subjt:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE

Q9XFD1 Nuclear cap-binding protein subunit 29.8e-10676.56Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFK+  KLS YRDRRF G+Q+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMP-QYG---KHGGSHGHG--NRHGRDYHH
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGTGSLG+     P  YG   + GG++G G  NRHGR  +H
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMP-QYG---KHGGSHGHG--NRHGRDYHH

Query:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR
        RKR RDDDR+  ++S+R +D+ESRR+++ + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR

Arabidopsis top hitse value%identityAlignment
AT1G66260.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-0832.91Show/hide
Query:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVD
        ++  TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   V+Y  R D   A++  +  +LD RP++++
Subjt:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVD

AT1G66260.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-0832.91Show/hide
Query:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVD
        ++  TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   V+Y  R D   A++  +  +LD RP++++
Subjt:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVD

AT3G46020.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.7e-0934.57Show/hide
Query:  VALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVD
        +A + S  ++V  +S YTT++ + +LFS  G+IK+  +  D  ++ P GF F+ + S +D   A+K + G I+D R I V+
Subjt:  VALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVD

AT5G44200.1 CAP-binding protein 206.9e-10776.56Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFK+  KLS YRDRRF G+Q+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMP-QYG---KHGGSHGHG--NRHGRDYHH
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGTGSLG+     P  YG   + GG++G G  NRHGR  +H
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMP-QYG---KHGGSHGHG--NRHGRDYHH

Query:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR
        RKR RDDDR+  ++S+R +D+ESRR+++ + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR

AT5G44200.2 CAP-binding protein 206.9e-10776.56Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFK+  KLS YRDRRF G+Q+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMP-QYG---KHGGSHGHG--NRHGRDYHH
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGTGSLG+     P  YG   + GG++G G  NRHGR  +H
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMP-QYG---KHGGSHGHG--NRHGRDYHH

Query:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR
        RKR RDDDR+  ++S+R +D+ESRR+++ + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGTTGTTCAAGGACCCAACAAAGCTATCAATTTATCGGGATAGAAGATTTCATGGATCACAAGATGAATTTGAAGTGGCACTTCAGACTTCAACCACTGTTTA
TGTGGGAAATATGTCCTTCTATACGACAGAGGAGCAAGTATATGAGCTTTTTTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAAACGC
CTTGTGGCTTTTGTTTTGTCCTATACTATTCTCGGGAGGATACCGAGGATGCTGTAAAATATATAAGTGGAACAATTCTTGATGATCGTCCCATCCGTGTGGATTTTGAT
TGGGGATTTCAGGATGGCAGGCAATGGGGCCGTGGTCGAAGTGGTGGACAGGTGCGTGATGAATATCGAACAGACTATGATCCTGGTAGAGGTGGCTATGGAAAGTTGGT
TCAGAAAGAGTTGGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGGCACCAGTTATGCCTCAGTATGGAAAACATGGTGGAAGCCATGGAC
ATGGGAATCGTCATGGTAGAGATTACCATCATCGTAAGCGCTACCGAGATGACGATCGCCATGCCCATGAAAGCTCTAAGAGAACTTCAGATTACGAGTCTAGAAGAAAC
TCCAATTATGAATCGAGACCGGAGAAGAATCCAAGATTCCGTGAGAGTGGTGATTCTGATGAAGAGGATGACGACGACCGTAAGCAGCGACACTAA
mRNA sequenceShow/hide mRNA sequence
CCTTTTCCTATCCCATTAACCCAAAGTTAAGTTATGCTTACAATTTTGCCTATTTCGATTTTGCCTATTTCGATTTTGCCTTCCTCTTCCTCTTGCTCTAAAATCGTCCA
CCATTAGCAGCGCGCGTCCAGGTCTGAAAGGCCGCCATTGCCTTTGGTTGAGGCTCGACAGAAGCTTGTTGTTTGCTGATTACCTTTTTCTCAGCGTCGAGAAGAACGCC
CAACTCAGCAAGCGTCATTTATCGTGTCTCTGGTGCGAATAGAGTCAGTTGAACGAGCTTTCATTTGAACCGCCTCTAATCTCTGTTCCTCTGCTTCTTCCTTTTTCCCT
TTTGTTCTTCGCCTTGGGTGATTAACTTACCAACACTTGATATATACTTGCTCTACCTAAACTGGGTTTTGAGTTTTGGTCCAGATTTTGTTGTTCTAGGGTTCATGGCT
TCGTTGTTCAAGGACCCAACAAAGCTATCAATTTATCGGGATAGAAGATTTCATGGATCACAAGATGAATTTGAAGTGGCACTTCAGACTTCAACCACTGTTTATGTGGG
AAATATGTCCTTCTATACGACAGAGGAGCAAGTATATGAGCTTTTTTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAAACGCCTTGTG
GCTTTTGTTTTGTCCTATACTATTCTCGGGAGGATACCGAGGATGCTGTAAAATATATAAGTGGAACAATTCTTGATGATCGTCCCATCCGTGTGGATTTTGATTGGGGA
TTTCAGGATGGCAGGCAATGGGGCCGTGGTCGAAGTGGTGGACAGGTGCGTGATGAATATCGAACAGACTATGATCCTGGTAGAGGTGGCTATGGAAAGTTGGTTCAGAA
AGAGTTGGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGGCACCAGTTATGCCTCAGTATGGAAAACATGGTGGAAGCCATGGACATGGGA
ATCGTCATGGTAGAGATTACCATCATCGTAAGCGCTACCGAGATGACGATCGCCATGCCCATGAAAGCTCTAAGAGAACTTCAGATTACGAGTCTAGAAGAAACTCCAAT
TATGAATCGAGACCGGAGAAGAATCCAAGATTCCGTGAGAGTGGTGATTCTGATGAAGAGGATGACGACGACCGTAAGCAGCGACACTAACCTTAGTGGTGTTTTCATAT
CAATCATAATGTGAGGAATCATTTACATTGGTGTTTGTAGTTCTGGAGATAGTGATAAAGGACAATTTCGTTACTTGTAGATGTAAAAACTAACGAGTTATTTTTTTTTT
CATGCCACTAGGTACTTTGTGCTTTCCTTAATGAAGGAATGACTATAAATGGCTGTTTACCGTTTATTTTTATAAGAATCAAGTAGGCGTTTTGTCGGAACTATGATGAG
AAAAATGAAGAATTCAATTCTCTTCTAAGTACTTTTAAGGAAGTGTGTAGCATTCGGTTGCTTGACAAGGATGCTGGTTGGAAGGAATGGTGTTGGTATGTAAGAAGGTG
AAATTTATGGAGTGATTTCCTGTGGTTATCACCAATTGGAGGATGGTCTGGGAAGTCTTTATTGAATGAAATCATGTGCATGGTACAATAATATTGATCCATCAACCTTC
GCAAGATTTGGAAATGCTTTCAAATTTGATTGAATTTTGAACTGTGGGATTGAAAAAGGTAAAGAACAAGTTGAAGGCAACAGATAAAAGGTCCAACAAACACCGCATTT
TTATAGCAGTGGAGACCCACGAAGGTAAAACACAATCTGCATTCAGTTTTTCTCCTTCAGAAGCAGAAGGATAACAACCCGCAAATTCAAACAAAAGATCAATTAATTTG
ATGTAGTGGAAAAATGATGTTGAATTGTCAACCCTATATTTCGAGATTGTTATGTGGTGAAATAAGTTTGAGGGTTTGGAAAATGGTTAGTTAAACTTTGTAGCTGTAGA
TGAAGGGTGTCCAGTCAACTGTTGGCAGACCATCTCCCCTTCTACAGTACAAAGTTACCTGGTGACTGGTGACTGGTGACTGGTCAGAGAGAGGAATTCAAAGGAAAAAA
AAAAAGAAGTTAAATTACACAAAACTAACTCTTCCGCGTAAAGTCATTGTCTACGAGGGTTCCTCACATGGCTTTACTCCTTGAACTTGGTAGTTGGGTATCTAGAATTA
ACATAACTTTTTACAAAGTTTAAATTTTAGTTAGTCAATGTCTCGATCATAAGCTTTATACATAATAAATCACGATATCTCTACCGTCTGTCTAATATGTAATGCCATAT
ATA
Protein sequenceShow/hide protein sequence
MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFD
WGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRN
SNYESRPEKNPRFRESGDSDEEDDDDRKQRH