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CSPI04G10030 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G10030
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr4:8068154..8068932
RNA-Seq ExpressionCSPI04G10030
SyntenyCSPI04G10030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN53789.1 hypothetical protein Csa_015152 [Cucumis sativus]2.9e-5498.23Show/hide
Query:  MATAAAPSTTAMTILILTLTISSYCNAASVLPSNFANETITAMTSTIFCNGLLQQCFNVEENVIHYYSTPRTGSRASSVCGRFYNGRYIKCITTQGSPKP
        MATAAAPSTTAMTILILTLTISSYCNAASVLPSNFANETITAMTSTIFCNGLLQQCFNVEEN IHYYSTPRTGSRASSVCGRFYNG YIKCITTQGSPKP
Subjt:  MATAAAPSTTAMTILILTLTISSYCNAASVLPSNFANETITAMTSTIFCNGLLQQCFNVEENVIHYYSTPRTGSRASSVCGRFYNGRYIKCITTQGSPKP

Query:  KDCRSAYDRTCSS
        KDCRSAYDRTCSS
Subjt:  KDCRSAYDRTCSS
KGN57814.1 hypothetical protein Csa_009509 [Cucumis sativus]7.2e-0538.02Show/hide
Query:  MATAAAPSTTAMTILILTLTI-SSYCNAASVLPSNFANETITAMTSTIFCNGLLQQCF------NVEENVI-HYYSTPRTGSRASSVCGRFYNGRY--IK
        MAT    +  A+ I+++  TI +S+C AAS L SN  NET TA TS+ +CN L ++C       N+E +     Y+T RT +   +VCGR   GRY   +
Subjt:  MATAAAPSTTAMTILILTLTI-SSYCNAASVLPSNFANETITAMTSTIFCNGLLQQCF------NVEENVI-HYYSTPRTGSRASSVCGRFYNGRY--IK

Query:  CITTQGSPKPKDCRSAYDRTC
        C+  Q  P P    S + R+C
Subjt:  CITTQGSPKPKDCRSAYDRTC
TrEMBL top hitse value%identityAlignment
A0A0A0KY59 Uncharacterized protein1.4e-5498.23Show/hide
Query:  MATAAAPSTTAMTILILTLTISSYCNAASVLPSNFANETITAMTSTIFCNGLLQQCFNVEENVIHYYSTPRTGSRASSVCGRFYNGRYIKCITTQGSPKP
        MATAAAPSTTAMTILILTLTISSYCNAASVLPSNFANETITAMTSTIFCNGLLQQCFNVEEN IHYYSTPRTGSRASSVCGRFYNG YIKCITTQGSPKP
Subjt:  MATAAAPSTTAMTILILTLTISSYCNAASVLPSNFANETITAMTSTIFCNGLLQQCFNVEENVIHYYSTPRTGSRASSVCGRFYNGRYIKCITTQGSPKP

Query:  KDCRSAYDRTCSS
        KDCRSAYDRTCSS
Subjt:  KDCRSAYDRTCSS
A0A0A0LA12 Uncharacterized protein3.5e-0538.02Show/hide
Query:  MATAAAPSTTAMTILILTLTI-SSYCNAASVLPSNFANETITAMTSTIFCNGLLQQCF------NVEENVI-HYYSTPRTGSRASSVCGRFYNGRY--IK
        MAT    +  A+ I+++  TI +S+C AAS L SN  NET TA TS+ +CN L ++C       N+E +     Y+T RT +   +VCGR   GRY   +
Subjt:  MATAAAPSTTAMTILILTLTI-SSYCNAASVLPSNFANETITAMTSTIFCNGLLQQCF------NVEENVI-HYYSTPRTGSRASSVCGRFYNGRY--IK

Query:  CITTQGSPKPKDCRSAYDRTC
        C+  Q  P P    S + R+C
Subjt:  CITTQGSPKPKDCRSAYDRTC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCGCGGCAGCACCCTCCACCACCGCCATGACAATCCTCATTTTGACGCTAACCATAAGTAGTTATTGCAACGCCGCTTCTGTACTTCCTTCAAATTTCGCTAA
CGAGACGATCACGGCTATGACATCCACCATCTTTTGTAATGGACTCCTCCAACAGTGCTTCAATGTTGAAGAAAATGTCATCCATTATTATTCTACTCCAAGAACTGGAA
GTCGAGCTTCAAGCGTATGTGGTCGGTTCTATAATGGAAGGTATATTAAATGTATAACAACCCAAGGATCCCCCAAACCGAAGGATTGTAGAAGTGCTTACGATCGCACC
TGTTCTAGTTAA
mRNA sequenceShow/hide mRNA sequence
AACCCCCAAAACACCAATTATTTAGACAGTGATGGCCACGTGAATGATCACTATAATTTCACCTCAATTTTCTCTCTTTTTTTATCATTATCTATTCCCCAATTCTATAA
ACTTAAAACCTTACATCCACAAATTCTTCACCCTTTTTCATTTCTTCCAATTTCATTCACGTAAGCTGCAATGGCGACCGCGGCAGCACCCTCCACCACCGCCATGACAA
TCCTCATTTTGACGCTAACCATAAGTAGTTATTGCAACGCCGCTTCTGTACTTCCTTCAAATTTCGCTAACGAGACGATCACGGCTATGACATCCACCATCTTTTGTAAT
GGACTCCTCCAACAGTGCTTCAATGTTGAAGAAAATGTCATCCATTATTATTCTACTCCAAGAACTGGAAGTCGAGCTTCAAGCGTATGTGGTCGGTTCTATAATGGAAG
GTATATTAAATGTATAACAACCCAAGGATCCCCCAAACCGAAGGATTGTAGAAGTGCTTACGATCGCACCTGTTCTAGTTAAGAATACAGAAGTATATATAAGGTATATG
TACGGTGTAGCTTGTTTTTTTTTTATTTATTTTAAATCACTATTAACCCTTCTTCTTTACTTGATCTTCATAATGCAATTTTATTATATTATACGTATTTTGGTACTTAC
TTAAATACCTGTTTTGTTTGTTTGGGTTAAAAATTGATAACCCATATACATTGGGGAGGAGGACCAATCAATTATATAAGCTTCTCTCCTTCTAATTTTTTTTTATTTAT
ATCTTTTTT
Protein sequenceShow/hide protein sequence
MATAAAPSTTAMTILILTLTISSYCNAASVLPSNFANETITAMTSTIFCNGLLQQCFNVEENVIHYYSTPRTGSRASSVCGRFYNGRYIKCITTQGSPKPKDCRSAYDRT
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