; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G10420 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G10420
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPectin lyase-like superfamily protein
Genome locationChr4:8536548..8537721
RNA-Seq ExpressionCSPI04G10420
SyntenyCSPI04G10420
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649347.1 hypothetical protein Csa_014476 [Cucumis sativus]4.9e-7697.96Show/hide
Query:  MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDY
        MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAW SACSSLTRST  INVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDY
Subjt:  MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDY

Query:  NALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGAR
        NALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGAR
Subjt:  NALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGAR

XP_004142576.2 polygalacturonase [Cucumis sativus]5.6e-8872.8Show/hide
Query:  MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDY
        MANPTKSLVF++FFHLFIQIS+A NYNVI+FGAKPDGKTDSTQSFLKAWTSACSS TRST  INVPKGRFLLT ITFRGPCKN  ITF LNGTLVAPLDY
Subjt:  MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDY

Query:  NALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGAR------------------------------------NVKIMAPDQSPNTDGIR
         ALGDS YWILF KV+G+SF+GG IDGKGT YWACK S K CPPGAR                                    NVKIMAPDQSPNTDGI 
Subjt:  NALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGAR------------------------------------NVKIMAPDQSPNTDGIR

Query:  VQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP
        VQSST VTI+ +TIKTGDDCISIGDGT NLFMSDIKCGP
Subjt:  VQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP

XP_008460791.1 PREDICTED: polygalacturonase-like [Cucumis melo]8.0e-9576.99Show/hide
Query:  MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDY
        MAN  KSLVF++FFHLFIQISSAG+YNVITFGAKPDGKTDSTQSFLKAW SACSSLTRST  INVPKGRFLLT+ITFRGPCKN+NI F LNGTLVAPLDY
Subjt:  MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDY

Query:  NALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGAR------------------------------------NVKIMAPDQSPNTDGIR
        NALGDS YWILFTKVNG+SFIGGNIDGKGT YWACKGSGKKCPPGAR                                    NVKIMAPDQSPNTDGI 
Subjt:  NALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGAR------------------------------------NVKIMAPDQSPNTDGIR

Query:  VQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP
        VQSST VTIS TTIKTGDDCISIGDGT NLFMSDIKCGP
Subjt:  VQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP

XP_031736043.1 polygalacturonase-like [Cucumis sativus]5.6e-8872.8Show/hide
Query:  MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDY
        MANPTKSLVF++FFHLFIQIS+A NYNVI+FGAKPDGKTDSTQSFLKAWTSACSS TRST  INVPKGRFLLT ITFRGPCKN  ITF LNGTLVAPLDY
Subjt:  MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDY

Query:  NALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGAR------------------------------------NVKIMAPDQSPNTDGIR
         ALGDS YWILF KV+G+SF+GG IDGKGT YWACK S K CPPGAR                                    NVKIMAPDQSPNTDGI 
Subjt:  NALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGAR------------------------------------NVKIMAPDQSPNTDGIR

Query:  VQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP
        VQSST VTI+ +TIKTGDDCISIGDGT NLFMSDIKCGP
Subjt:  VQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP

XP_038876456.1 polygalacturonase-like [Benincasa hispida]8.6e-8167.78Show/hide
Query:  MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDY
        M +P KSLV ++FFH FIQ+SSAG+YNVIT GAKPDGKTDST+SF+KAW SACSSLT S   INVPKGRFLLT ITFRGPCKN  ITF+LNGTLVAPLDY
Subjt:  MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDY

Query:  NALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGAR------------------------------------NVKIMAPDQSPNTDGIR
          LG+S YWILF KV+G+SFIGGNIDGK T+YW CK SGK CPPGAR                                    NVKIMAPDQSPNTDGI 
Subjt:  NALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGAR------------------------------------NVKIMAPDQSPNTDGIR

Query:  VQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP
        VQSST VTI  +TIKTGDDCISIGDGT NLFM++IKCGP
Subjt:  VQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP

TrEMBL top hitse value%identityAlignment
A0A0A0KZM5 Uncharacterized protein1.4e-7696Show/hide
Query:  MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDY
        MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAW SACSSLTRST  INVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDY
Subjt:  MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDY

Query:  NALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGARNVK
        NALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGAR  +
Subjt:  NALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGARNVK

A0A0A0M0F3 Uncharacterized protein2.7e-8872.8Show/hide
Query:  MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDY
        MANPTKSLVF++FFHLFIQIS+A NYNVI+FGAKPDGKTDSTQSFLKAWTSACSS TRST  INVPKGRFLLT ITFRGPCKN  ITF LNGTLVAPLDY
Subjt:  MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDY

Query:  NALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGAR------------------------------------NVKIMAPDQSPNTDGIR
         ALGDS YWILF KV+G+SF+GG IDGKGT YWACK S K CPPGAR                                    NVKIMAPDQSPNTDGI 
Subjt:  NALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGAR------------------------------------NVKIMAPDQSPNTDGIR

Query:  VQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP
        VQSST VTI+ +TIKTGDDCISIGDGT NLFMSDIKCGP
Subjt:  VQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP

A0A1S3CD98 polygalacturonase-like3.9e-9576.99Show/hide
Query:  MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDY
        MAN  KSLVF++FFHLFIQISSAG+YNVITFGAKPDGKTDSTQSFLKAW SACSSLTRST  INVPKGRFLLT+ITFRGPCKN+NI F LNGTLVAPLDY
Subjt:  MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDY

Query:  NALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGAR------------------------------------NVKIMAPDQSPNTDGIR
        NALGDS YWILFTKVNG+SFIGGNIDGKGT YWACKGSGKKCPPGAR                                    NVKIMAPDQSPNTDGI 
Subjt:  NALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGAR------------------------------------NVKIMAPDQSPNTDGIR

Query:  VQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP
        VQSST VTIS TTIKTGDDCISIGDGT NLFMSDIKCGP
Subjt:  VQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP

A0A5A7VB33 Polygalacturonase-like3.9e-9576.99Show/hide
Query:  MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDY
        MAN  KSLVF++FFHLFIQISSAG+YNVITFGAKPDGKTDSTQSFLKAW SACSSLTRST  INVPKGRFLLT+ITFRGPCKN+NI F LNGTLVAPLDY
Subjt:  MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDY

Query:  NALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGAR------------------------------------NVKIMAPDQSPNTDGIR
        NALGDS YWILFTKVNG+SFIGGNIDGKGT YWACKGSGKKCPPGAR                                    NVKIMAPDQSPNTDGI 
Subjt:  NALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGAR------------------------------------NVKIMAPDQSPNTDGIR

Query:  VQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP
        VQSST VTIS TTIKTGDDCISIGDGT NLFMSDIKCGP
Subjt:  VQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP

A0A6J1JKS6 polygalacturonase-like4.0e-7665Show/hide
Query:  MANPTKSLVFVL-FFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLD
        MAN  K+L+ ++  F+ FIQ+SSA  YNVIT+GAKPDGKTDST+ FLKAWTSAC+S T ST  INVPKGRFLL  ITFRGPCKN  ITF+LNGTLVAPLD
Subjt:  MANPTKSLVFVL-FFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLD

Query:  YNALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGAR------------------------------------NVKIMAPDQSPNTDGI
        + ALG S YWILF KVN +SF GGNID KG  YWACK SGK CPPGAR                                    NVKIMAPDQSPNTDGI
Subjt:  YNALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGAR------------------------------------NVKIMAPDQSPNTDGI

Query:  RVQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP
         VQSST VTI+ TTI+TGDDCISIGDGT NLFM+ IKCGP
Subjt:  RVQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP

SwissProt top hitse value%identityAlignment
O22818 Probable polygalacturonase At2g438601.0e-3940.93Show/hide
Query:  NVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRG-PCKNSNITFQLNGTLVAPLDYNALGDSRYWILFTKVNGISFIGGNI
        NV+++GAKPDG  DST++FL AW  AC+S   +T  I VPKGRFL+ ++ F G  CK + I+ ++ G++VAP D+  +  S++WI F  V  +S  GG +
Subjt:  NVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRG-PCKNSNITFQLNGTLVAPLDYNALGDSRYWILFTKVNGISFIGGNI

Query:  DGKGTDYWACKGS-GKKCPPGARN------------------------------------VKIMAPDQSPNTDGIRVQSSTAVTISRTTIKTGDDCISIG
        D +GT  W CK + G  CP GA++                                    VK+ A + SPNTDGI V+SS +V I+ + I TGDDCISIG
Subjt:  DGKGTDYWACKGS-GKKCPPGARN------------------------------------VKIMAPDQSPNTDGIRVQSSTAVTISRTTIKTGDDCISIG

Query:  DGTNNLFMSDIKCGP
         G+ N+F+  I+CGP
Subjt:  DGTNNLFMSDIKCGP

O23147 Polygalacturonase ADPG18.5e-3138.39Show/hide
Query:  AGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGR-FLLTSITFRGPCKNSNITFQLNGTLVAPLDYNALGDSRYWILFTKVNGISFI
        A   +V  FGAK DGKTD TQ+F KAW  ACS  T       VPKG+ +LL S  FRGPCK+    FQ+ GTL A    +   D  +W++   VN +S  
Subjt:  AGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGR-FLLTSITFRGPCKNSNITFQLNGTLVAPLDYNALGDSRYWILFTKVNGISFI

Query:  GGN---IDGKGTDYW--ACK-GSGKKCPPG------------------------------------ARNVKIMAPDQSPNTDGIRVQSSTAVTISRTTIK
        GG+   I+G G  +W  +CK    K C                                         NV+I AP  SPNTDGI + ++  + +S + I 
Subjt:  GGN---IDGKGTDYW--ACK-GSGKKCPPG------------------------------------ARNVKIMAPDQSPNTDGIRVQSSTAVTISRTTIK

Query:  TGDDCISIGDGTNNLFMSDIKCGP
        TGDDCISI DGT NL + D+ CGP
Subjt:  TGDDCISIGDGTNNLFMSDIKCGP

P48979 Polygalacturonase4.2e-4642.74Show/hide
Query:  SLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDYNALGDS
        SL  +  F +   I+S   YNV + GAK DGKTDST++FL AW  AC+S+      I VP G F L  + F GPCKN+ ITF++ GTLVAP DY  +G++
Subjt:  SLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDYNALGDS

Query:  RYWILFTKVNGISFIGGNIDGKGTDYWACKG-SGKKCPPGA------------------------------------RNVKIMAPDQSPNTDGIRVQSST
          WI F  VNG++  GG +DG+GT  WACK   G+ CP GA                                    + V++     SPNTDGI VQ S+
Subjt:  RYWILFTKVNGISFIGGNIDGKGTDYWACKG-SGKKCPPGA------------------------------------RNVKIMAPDQSPNTDGIRVQSST

Query:  AVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP
         VTI  + I TGDDC+SIG GT+NL++  + CGP
Subjt:  AVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP

Q39786 Polygalacturonase3.2e-3038.03Show/hide
Query:  VFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDYNALGDSRY
        V +L F    ++ S     V  FGAK DGKTD ++ FL AW  AC+S+T ST+ I  PKG +LL+ +   GPCK + I   + GT+ AP D +A  D   
Subjt:  VFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDYNALGDSRY

Query:  WILFTKVNGISFIGGNI-DGKGTDYW---ACKGS--GKKCPPGAR---------------------------------NVKIMAPDQSPNTDGIRVQSST
        W+ F  V      GG I DG+G+  +    C+      K P   R                                  +KI APD+SPNTDGI +  S 
Subjt:  WILFTKVNGISFIGGNI-DGKGTDYW---ACKGS--GKKCPPGAR---------------------------------NVKIMAPDQSPNTDGIRVQSST

Query:  AVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP
         V I  + IKTGDDCISIGDGT N+ + +I CGP
Subjt:  AVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP

Q9LW07 Probable polygalacturonase At3g157201.4e-3038.53Show/hide
Query:  KSLVFVLFFHLFIQISSAGN-YNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKG-RFLLTSITFRGPCKNSNITFQLNGTLVAPLDYNAL
        K   F+ F   F+QI ++ N  +V  FGA  DG TD +Q+FLKAW + CS          VP G  F+L  + F+G CK++ +  Q+ G LVAP   N  
Subjt:  KSLVFVLFFHLFIQISSAGN-YNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKG-RFLLTSITFRGPCKNSNITFQLNGTLVAPLDYNAL

Query:  GDSRYWILFTKVNGISFIG-GNIDGKGTDYWACKGSG------KKC------------PPGAR------------NVKIMAPDQSPNTDGIRVQSSTAVT
        GD   WILFT + G+   G G I+G+G+ +W  KGS       + C             P A             +++I AP+ SPNTDGI V +S+ V 
Subjt:  GDSRYWILFTKVNGISFIG-GNIDGKGTDYWACKGSG------KKC------------PPGAR------------NVKIMAPDQSPNTDGIRVQSSTAVT

Query:  ISRTTIKTGDDCISIGDGTNNLFMSDIKCGP
        I    I TGDDCI+I  GT+N+ +S I CGP
Subjt:  ISRTTIKTGDDCISIGDGTNNLFMSDIKCGP

Arabidopsis top hitse value%identityAlignment
AT1G05650.1 Pectin lyase-like superfamily protein2.8e-5346.25Show/hide
Query:  TKS-LVFVLFFHL--FIQISSAGN--YNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLD
        TKS + F L F L  FI +SS+ +  +NV++FGAKPDG TDST +FLKAW  AC S   +T  + VP G FLL  ITF GPCK S ITFQ+ GT+VAP D
Subjt:  TKS-LVFVLFFHL--FIQISSAGN--YNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLD

Query:  YNALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPG------------------------------------ARNVKIMAPDQSPNTDGI
        Y   G+S  WILF KVN  S +GG  D +G+ +W+C+ SG+ CPPG                                     RN++++AP  SPNTDG 
Subjt:  YNALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPG------------------------------------ARNVKIMAPDQSPNTDGI

Query:  RVQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP
         VQ ST VT++ +T++TGDDC++IG GT N  +S + CGP
Subjt:  RVQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP

AT1G05660.1 Pectin lyase-like superfamily protein1.9e-5445.92Show/hide
Query:  SLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDYNALGDS
        SL+F L   + + IS++  +NV++FGAKPDG TDST +FLKAW  AC S + +T  + VPKG FLL  ITF GPCK S ITFQ+ GT++AP DY   G+S
Subjt:  SLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDYNALGDS

Query:  RYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPG------------------------------------ARNVKIMAPDQSPNTDGIRVQSSTA
         +WILF KVN  S +GG  D +   +W+C+ SG+ CPPG                                     RNVK++AP  SPNTDG  VQ ST 
Subjt:  RYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPG------------------------------------ARNVKIMAPDQSPNTDGIRVQSSTA

Query:  VTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP
        VT + +T++TGDDC++IG GT NL ++ + CGP
Subjt:  VTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP

AT2G43870.1 Pectin lyase-like superfamily protein2.4e-5245.26Show/hide
Query:  VFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRG-PCKNSNITFQLNGTLVAPLDYNALGDSR
        + VLF   FI   SA +YNV++FGAKPDGKTD+T++F+  W +AC+S     + I VPKGRFLL S+TF G  CK   +TF+++GTLVAP DY  +G+  
Subjt:  VFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRG-PCKNSNITFQLNGTLVAPLDYNALGDSR

Query:  YWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGA------------------------------------RNVKIMAPDQSPNTDGIRVQSSTAV
        YWI F  ++GI+  GG +D +G   W CK SGK CP GA                                    + VK++A   SPNTDGI VQSS++V
Subjt:  YWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGA------------------------------------RNVKIMAPDQSPNTDGIRVQSSTAV

Query:  TISRTTIKTGDDCISIGDGTNNLFMSDIKCGP
        +I  T I TGDDC+SIG GTN L++ ++ CGP
Subjt:  TISRTTIKTGDDCISIGDGTNNLFMSDIKCGP

AT2G43890.1 Pectin lyase-like superfamily protein6.8e-6048.76Show/hide
Query:  MANPTKSLVFVLFFHLFIQISS---AGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAP
        M N     V ++FF  F+ + S   A NYNV++FGAKPDG+TDST++FL AW +AC S   + + + VP+G FLL  + FRGPC+ S ITFQ+ GT+VAP
Subjt:  MANPTKSLVFVLFFHLFIQISS---AGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAP

Query:  LDYNALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGARN------------------------------------VKIMAPDQSPNTD
         DY  LG+S YWILF KVN IS IGG +D +G  +WAC+ SGK CP GAR+                                    VK++APDQSPNTD
Subjt:  LDYNALGDSRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGARN------------------------------------VKIMAPDQSPNTD

Query:  GIRVQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP
        G+ VQ S  VT++  T  TGDDCISIG GT NL+MS + CGP
Subjt:  GIRVQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP

AT3G59850.1 Pectin lyase-like superfamily protein1.8e-5246.58Show/hide
Query:  SLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRG-PCKNSNITFQLNGTLVAPLDYNALGD
        SL+ VL F L +  SSA  YN++++GAKPDGKTDST++F   W  AC+S+    + I VPKGRFLL SI F G  CK  ++TF++ GTLVAP DY  +G 
Subjt:  SLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRG-PCKNSNITFQLNGTLVAPLDYNALGD

Query:  SRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGA--------RN----------------------------VKIMAPDQSPNTDGIRVQSST
          YWILF  ++GIS  GG +D +G   W+CK SGK CP GA        RN                            VK+ A   SPNTDGI VQSS+
Subjt:  SRYWILFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGA--------RN----------------------------VKIMAPDQSPNTDGIRVQSST

Query:  AVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP
         V+I  + I TGDDC+SIG GTN L++ ++ CGP
Subjt:  AVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACCCAACAAAAAGTTTAGTCTTCGTTCTCTTCTTCCATTTGTTCATTCAAATTTCAAGTGCAGGCAACTACAATGTGATAACATTCGGTGCAAAACCGGATGG
AAAAACTGACTCAACCCAATCATTTCTGAAAGCGTGGACGTCTGCATGTAGCTCCTTGACACGATCCACCATTGATATCAACGTCCCTAAGGGAAGGTTCTTGCTTACAT
CCATCACATTTAGAGGTCCATGTAAGAACAGCAACATTACATTTCAATTGAATGGAACACTCGTGGCACCTCTTGACTATAATGCTCTTGGAGATTCTAGGTATTGGATT
TTGTTCACCAAAGTTAATGGAATTTCTTTCATCGGTGGCAATATTGATGGAAAAGGCACCGACTATTGGGCTTGCAAGGGCTCTGGAAAAAAATGTCCCCCGGGAGCAAG
GAATGTGAAGATAATGGCTCCAGACCAAAGCCCCAATACTGATGGCATCCGTGTGCAATCCTCCACTGCTGTAACCATCTCTCGAACTACCATTAAAACGGGAGATGATT
GCATTTCTATTGGTGATGGAACAAATAATTTGTTTATGAGTGATATTAAATGTGGGCCCGCCATGGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACCCAACAAAAAGTTTAGTCTTCGTTCTCTTCTTCCATTTGTTCATTCAAATTTCAAGTGCAGGCAACTACAATGTGATAACATTCGGTGCAAAACCGGATGG
AAAAACTGACTCAACCCAATCATTTCTGAAAGCGTGGACGTCTGCATGTAGCTCCTTGACACGATCCACCATTGATATCAACGTCCCTAAGGGAAGGTTCTTGCTTACAT
CCATCACATTTAGAGGTCCATGTAAGAACAGCAACATTACATTTCAATTGAATGGAACACTCGTGGCACCTCTTGACTATAATGCTCTTGGAGATTCTAGGTATTGGATT
TTGTTCACCAAAGTTAATGGAATTTCTTTCATCGGTGGCAATATTGATGGAAAAGGCACCGACTATTGGGCTTGCAAGGGCTCTGGAAAAAAATGTCCCCCGGGAGCAAG
GAATGTGAAGATAATGGCTCCAGACCAAAGCCCCAATACTGATGGCATCCGTGTGCAATCCTCCACTGCTGTAACCATCTCTCGAACTACCATTAAAACGGGAGATGATT
GCATTTCTATTGGTGATGGAACAAATAATTTGTTTATGAGTGATATTAAATGTGGGCCCGCCATGGTGTAA
Protein sequenceShow/hide protein sequence
MANPTKSLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWTSACSSLTRSTIDINVPKGRFLLTSITFRGPCKNSNITFQLNGTLVAPLDYNALGDSRYWI
LFTKVNGISFIGGNIDGKGTDYWACKGSGKKCPPGARNVKIMAPDQSPNTDGIRVQSSTAVTISRTTIKTGDDCISIGDGTNNLFMSDIKCGPAMV