; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G10430 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G10430
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description60S ribosomal protein L6
Genome locationChr4:8545034..8547315
RNA-Seq ExpressionCSPI04G10430
SyntenyCSPI04G10430
Gene Ontology termsGO:0000027 - ribosomal large subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000915 - 60S ribosomal protein L6E
IPR005568 - Ribosomal protein L6, N-terminal
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041997 - Ribosomal Protein L6, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149609.1 60S ribosomal protein L6-2 [Cucumis sativus]1.6e-11595.24Show/hide
Query:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA++PAEKPPKFYPADDVKKP+VNKRK KPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKF DKYFSKEV +KKKKGEGEFFEAEKEEKSALPQ+KKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL

Query:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF

XP_004150161.2 60S ribosomal protein L6-1 [Cucumis sativus]1.9e-121100Show/hide
Query:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL

Query:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF

XP_008460790.1 PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo]3.7e-11797.4Show/hide
Query:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGG+FPRHDAKPKADSPAEKPPKFYPA DVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKF DKYFSKEV +KKKKGEGEFFEAEKEEKSALPQ KKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL

Query:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF

XP_022935449.1 60S ribosomal protein L6-1-like [Cucurbita moschata]9.2e-11695.24Show/hide
Query:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK D+PAEKPPKFYPADDVKKPLVNKRK KPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKF DKYFSKEV +KKKKGEGEFFEAEKEEKSALPQ+KKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL

Query:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        LKSIEAVSDLKTYLAARFSLK+GMKPHELVF
Subjt:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF

XP_038880885.1 60S ribosomal protein L6-1-like [Benincasa hispida]6.4e-11796.54Show/hide
Query:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAD+PAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL
        KGKRVVFLKQL SGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKF DKYFSKEV +KKKKGEGEFFEAEKEEKSALPQ+KKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL

Query:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        LKSIEAV+DLKTYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF

TrEMBL top hitse value%identityAlignment
A0A0A0KYA4 60S ribosomal protein L69.3e-122100Show/hide
Query:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL

Query:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF

A0A0A0L9J7 60S ribosomal protein L67.6e-11695.24Show/hide
Query:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA++PAEKPPKFYPADDVKKP+VNKRK KPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKF DKYFSKEV +KKKKGEGEFFEAEKEEKSALPQ+KKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL

Query:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF

A0A1S3CD97 60S ribosomal protein L61.8e-11797.4Show/hide
Query:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGG+FPRHDAKPKADSPAEKPPKFYPA DVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKF DKYFSKEV +KKKKGEGEFFEAEKEEKSALPQ KKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL

Query:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF

A0A5D3BPH9 60S ribosomal protein L61.8e-11797.4Show/hide
Query:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGG+FPRHDAKPKADSPAEKPPKFYPA DVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKF DKYFSKEV +KKKKGEGEFFEAEKEEKSALPQ KKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL

Query:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF

A0A6J1F5G0 60S ribosomal protein L64.5e-11695.24Show/hide
Query:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK D+PAEKPPKFYPADDVKKPLVNKRK KPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKF DKYFSKEV +KKKKGEGEFFEAEKEEKSALPQ+KKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSAL

Query:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        LKSIEAVSDLKTYLAARFSLK+GMKPHELVF
Subjt:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF

SwissProt top hitse value%identityAlignment
P34091 60S ribosomal protein L66.7e-10183.93Show/hide
Query:  VSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVF
        VSRNPEL+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  K       EKPPKFYPADDVKKPL+NKRKPKPTKLR+SITPGTVLIIL GRFKGKRVVF
Subjt:  VSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVF

Query:  LKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALLKSIEAV
        LKQL SGLLLVTGPFKVNGVPLRRVNQ+YVIATSTKVDI+GVNVEKF DKYF K+  +K KKGEGEFFEAEK+E + LPQEKKDDQKAVD ALLK+IE V
Subjt:  LKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALLKSIEAV

Query:  SDLKTYLAARFSLKAGMKPHELVF
         +LK YL ARFSLKAGMKPHELVF
Subjt:  SDLKTYLAARFSLKAGMKPHELVF

P47911 60S ribosomal protein L61.9e-4748.25Show/hide
Query:  PKTAR--VSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADS--------------------PAEKPPKFYPADDVKKPLVNKRKPKP
        PK A+   SRNP L+RG+G+YSRS MY ++ L+  K K      + + K K +                        K P++YP +DV + L++  K KP
Subjt:  PKTAR--VSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADS--------------------PAEKPPKFYPADDVKKPLVNKRKPKP

Query:  -----TKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEK-FGDKYFSKEVHQKKKKGEGEF
              +LRSSITPGTVLIILTGR +GKRVVFLKQL SGLLLVTGP  +N VPLRR +Q +VIATSTKVDI+ V + K   D YF K+  +K +  EGE 
Subjt:  -----TKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEK-FGDKYFSKEVHQKKKKGEGEF

Query:  FEAEKEEKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        F+ EK EK  + +++K DQKAVD  +L  I+AV  L+ YL ++FSL  GM PH+LVF
Subjt:  FEAEKEEKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

Q9C9C5 60S ribosomal protein L6-33.3e-10081.14Show/hide
Query:  KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGK
        +T +V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D+P EKPPKFYPA+DVKKPL N+R  KPTKLR+SITPGTVLIIL GRFKGK
Subjt:  KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALLKS
        RVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDI+GV ++KF DKYF K   +KKKK EGEFFEAEKEEK  +PQ KKDDQKAVD+AL+K+
Subjt:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALLKS

Query:  IEAVSDLKTYLAARFSLKAGMKPHELVF
        IEAV +LKTYL ARFSLK GMKPHELVF
Subjt:  IEAVSDLKTYLAARFSLKAGMKPHELVF

Q9C9C6 60S ribosomal protein L6-23.3e-10081.14Show/hide
Query:  KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGK
        +TA+V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D+P EKPPKFYPA+DVKKPL N+R  KP KLR+SITPGTVLIIL GRFKGK
Subjt:  KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALLKS
        RVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDI+GV ++KF DKYF K   +KKKK EGEFFEAEKEEK  +PQ KKDDQKAVD+AL+K+
Subjt:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALLKS

Query:  IEAVSDLKTYLAARFSLKAGMKPHELVF
        IEAV +LKTYL ARFSLK GMKPHELVF
Subjt:  IEAVSDLKTYLAARFSLKAGMKPHELVF

Q9FZ76 60S ribosomal protein L6-16.0e-10280.87Show/hide
Query:  APKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFK
        A +T +V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK D+P EKP KFYPA+DVKKPLVN+RKPKPTKL++SITPGTVLIIL GRFK
Subjt:  APKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFK

Query:  GKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALL
        GKRVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKF DKYF K   +KKKK EGEFFEAEKEEK  +PQEKK+DQK VD+AL+
Subjt:  GKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALL

Query:  KSIEAVSDLKTYLAARFSLKAGMKPHELVF
        KSIEAV +LK YL ARFSL  GMKPHELVF
Subjt:  KSIEAVSDLKTYLAARFSLKAGMKPHELVF

Arabidopsis top hitse value%identityAlignment
AT1G18540.1 Ribosomal protein L6 family protein4.3e-10380.87Show/hide
Query:  APKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFK
        A +T +V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK D+P EKP KFYPA+DVKKPLVN+RKPKPTKL++SITPGTVLIIL GRFK
Subjt:  APKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFK

Query:  GKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALL
        GKRVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKF DKYF K   +KKKK EGEFFEAEKEEK  +PQEKK+DQK VD+AL+
Subjt:  GKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALL

Query:  KSIEAVSDLKTYLAARFSLKAGMKPHELVF
        KSIEAV +LK YL ARFSL  GMKPHELVF
Subjt:  KSIEAVSDLKTYLAARFSLKAGMKPHELVF

AT1G74050.1 Ribosomal protein L6 family protein2.4e-10181.14Show/hide
Query:  KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGK
        +T +V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D+P EKPPKFYPA+DVKKPL N+R  KPTKLR+SITPGTVLIIL GRFKGK
Subjt:  KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALLKS
        RVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDI+GV ++KF DKYF K   +KKKK EGEFFEAEKEEK  +PQ KKDDQKAVD+AL+K+
Subjt:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALLKS

Query:  IEAVSDLKTYLAARFSLKAGMKPHELVF
        IEAV +LKTYL ARFSLK GMKPHELVF
Subjt:  IEAVSDLKTYLAARFSLKAGMKPHELVF

AT1G74060.1 Ribosomal protein L6 family protein2.4e-10181.14Show/hide
Query:  KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGK
        +TA+V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D+P EKPPKFYPA+DVKKPL N+R  KP KLR+SITPGTVLIIL GRFKGK
Subjt:  KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALLKS
        RVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDI+GV ++KF DKYF K   +KKKK EGEFFEAEKEEK  +PQ KKDDQKAVD+AL+K+
Subjt:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALLKS

Query:  IEAVSDLKTYLAARFSLKAGMKPHELVF
        IEAV +LKTYL ARFSLK GMKPHELVF
Subjt:  IEAVSDLKTYLAARFSLKAGMKPHELVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGAAGACAGCAAGAGTTAGCAGAAATCCTGAACTCATTCGAGGGGTTGGCAAATACTCGAGGTCGAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGC
CAAAAATGGAGGTGTCTTCCCTCGCCATGATGCCAAGCCTAAGGCAGATTCTCCTGCTGAGAAGCCGCCCAAATTTTACCCAGCCGATGATGTCAAGAAACCACTTGTTA
ACAAGCGCAAACCCAAGCCCACCAAACTTAGGTCCAGCATTACTCCTGGAACCGTGCTTATCATTCTTACTGGAAGGTTTAAGGGAAAGAGAGTTGTGTTCTTGAAGCAA
CTTCCGTCTGGGCTGCTTTTAGTGACTGGGCCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTGC
AGGGGTCAATGTGGAGAAATTTGGTGACAAATATTTCTCCAAGGAAGTTCATCAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGAAAAAAGTG
CGCTCCCACAGGAGAAAAAGGATGACCAGAAGGCCGTGGACTCGGCTCTGCTAAAGTCCATTGAGGCAGTCTCAGACTTGAAGACATACTTAGCTGCAAGGTTTTCTCTA
AAGGCAGGCATGAAGCCACATGAGCTTGTTTTCTAG
mRNA sequenceShow/hide mRNA sequence
AAATAAACGGGGCCTTCCAGTGTAATGGGCGTATAAACCCCTAAAATTTAATAATTTAACCCTTAATTTTCTCTCTAGGGCTTTTGGCGAGTAGAGGAACGAAGGCGACG
GTGCCAAATTCTCAGAAGTTCATCAATGGCTCCGAAGACAGCAAGAGTTAGCAGAAATCCTGAACTCATTCGAGGGGTTGGCAAATACTCGAGGTCGAAGATGTACCACA
AGCGTGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTCTTCCCTCGCCATGATGCCAAGCCTAAGGCAGATTCTCCTGCTGAGAAGCCGCCCAAATTTTACCCAGCC
GATGATGTCAAGAAACCACTTGTTAACAAGCGCAAACCCAAGCCCACCAAACTTAGGTCCAGCATTACTCCTGGAACCGTGCTTATCATTCTTACTGGAAGGTTTAAGGG
AAAGAGAGTTGTGTTCTTGAAGCAACTTCCGTCTGGGCTGCTTTTAGTGACTGGGCCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTG
CAACCTCCACCAAGGTGGACATTGCAGGGGTCAATGTGGAGAAATTTGGTGACAAATATTTCTCCAAGGAAGTTCATCAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTC
GAGGCAGAGAAGGAGGAAAAAAGTGCGCTCCCACAGGAGAAAAAGGATGACCAGAAGGCCGTGGACTCGGCTCTGCTAAAGTCCATTGAGGCAGTCTCAGACTTGAAGAC
ATACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAGCCACATGAGCTTGTTTTCTAGATATTTTCTGTGTGGTTTCTGATACGCCTCTTGGGGAATTTGATCCCTA
TAATCTTCTTGTTCATGTTTTGTTATGAGGGTTGTAGATTTGAAATTATGTCTCGCAATGAATTTTGTAGTGAAGTTTATTCATCAAATCCTACATTACGTGGCTTCCTT
TGACTGGTGAGAGTGATAAGACATGTAATTTTTGTTCAATTTCTGGCTGGTGAAATACTTGAGAAACACATTGATAAAGATAGATCGGTTGACTTACAATGGTGCATGGC
CATGTTTGATTAGTATGCAACGTCAGAGAGTGGGCAATGTATGCTTGAATCTCATATATTTGGGGTTTCTTTTTCAATTTGGTTAAAATGATATTTTCTTCTCTGCCCTT
CACTTGTTTATCATATGATAATAATTTTACTGTTGGCATGTATGGAGCGATCTTGAAAAAATTAAAATCACTTTTGAATACTTTTACTCC
Protein sequenceShow/hide protein sequence
MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQ
LPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSL
KAGMKPHELVF