; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G10650 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G10650
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionSpc97 / Spc98 family of spindle pole body (SBP) component
Genome locationChr4:8890607..8891011
RNA-Seq ExpressionCSPI04G10650
SyntenyCSPI04G10650
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0005319 - lipid transporter activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN53863.2 hypothetical protein Csa_019174 [Cucumis sativus]1.0e-6197.78Show/hide
Query:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL
        MEEANEILKNKRIE ISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL
Subjt:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRPREKVDSRY-KNDKL
        SIDEIMASICSDRRKKPGKRP+EKVDSRY KNDKL
Subjt:  SIDEIMASICSDRRKKPGKRPREKVDSRY-KNDKL

XP_008450999.1 PREDICTED: uncharacterized protein LOC103492413 [Cucumis melo]1.7e-5393.55Show/hide
Query:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKI
        MEEANEILKN R+EDISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  RAIGFVLMEHLKGELRTSDVSDLSQSA LNACNLLDSN+EKI
Subjt:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKI

Query:  LSIDEIMASICSDRRKKPGKRPRE
        LSIDEIMASICSDRRKKPGKRPR+
Subjt:  LSIDEIMASICSDRRKKPGKRPRE

XP_008460383.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo]2.6e-5492.06Show/hide
Query:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL
        MEEANEILKN RIEDISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  R IGFVLMEHLKGELRTSDV+DLSQSALNACNLLDSNLEK L
Subjt:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRPREKVD
         IDEIM SIC DRRKKPGKRPREKVD
Subjt:  SIDEIMASICSDRRKKPGKRPREKVD

XP_011651663.2 uncharacterized protein LOC101210446 [Cucumis sativus]8.2e-5690.15Show/hide
Query:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL
        MEEANEILKN RIEDISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDL+  RAIGFVLMEHLKG+LRTSDVSDLSQS  NACNLLDSNLEKIL
Subjt:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRPREKVDSRYKND
        SIDEIMASICSDRRKKPGKR REKVD  YK +
Subjt:  SIDEIMASICSDRRKKPGKRPREKVDSRYKND

XP_011653427.1 uncharacterized protein LOC105435221 [Cucumis sativus]1.0e-6197.78Show/hide
Query:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL
        MEEANEILKNKRIE ISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL
Subjt:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRPREKVDSRY-KNDKL
        SIDEIMASICSDRRKKPGKRP+EKVDSRY KNDKL
Subjt:  SIDEIMASICSDRRKKPGKRPREKVDSRY-KNDKL

TrEMBL top hitse value%identityAlignment
A0A0A0KW48 Uncharacterized protein4.8e-6297.78Show/hide
Query:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL
        MEEANEILKNKRIE ISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL
Subjt:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRPREKVDSRY-KNDKL
        SIDEIMASICSDRRKKPGKRP+EKVDSRY KNDKL
Subjt:  SIDEIMASICSDRRKKPGKRPREKVDSRY-KNDKL

A0A0A0LBP9 Uncharacterized protein6.7e-5690.15Show/hide
Query:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL
        MEEANEILKNKRIE ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDL+  RAIGFVLMEHLKG+LRTSDVSDLSQS  NACNLLDSNLEKIL
Subjt:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRPREKVDSRYKND
        SIDEIMASICSDRRKKPGKR REKVD  YK +
Subjt:  SIDEIMASICSDRRKKPGKRPREKVDSRYKND

A0A1S3BQH9 uncharacterized protein LOC1034924138.2e-5493.55Show/hide
Query:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKI
        MEEANEILKN R+EDISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  RAIGFVLMEHLKGELRTSDVSDLSQSA LNACNLLDSN+EKI
Subjt:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKI

Query:  LSIDEIMASICSDRRKKPGKRPRE
        LSIDEIMASICSDRRKKPGKRPR+
Subjt:  LSIDEIMASICSDRRKKPGKRPRE

A0A1S3CBX7 uncharacterized protein LOC1034992201.3e-5492.06Show/hide
Query:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL
        MEEANEILKN RIEDISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  R IGFVLMEHLKGELRTSDV+DLSQSALNACNLLDSNLEK L
Subjt:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRPREKVD
         IDEIM SIC DRRKKPGKRPREKVD
Subjt:  SIDEIMASICSDRRKKPGKRPREKVD

A0A5A7UQA1 Uncharacterized protein2.0e-5291.94Show/hide
Query:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKI
        MEEANEILKN R+EDISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  RAIGFVLMEHLKGELRTSDVSDLSQSA LNACNLLDSN+EKI
Subjt:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKI

Query:  LSIDEIMASICSDRRKKPGKRPRE
        LSIDEIMASICSDRRKKPGKR ++
Subjt:  LSIDEIMASICSDRRKKPGKRPRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G80245.1 Spc97 / Spc98 family of spindle pole body (SBP) component3.2e-2647.66Show/hide
Query:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLDS
        MEE  +ILKN R +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDLK+ R++G VLMEH +   R  + + L+ S       L+ CNLL +
Subjt:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLDS

Query:  NLEKILSIDEIMASICSDRRKKPGKRPR
        +++  + I+EI+  IC ++ KK  ++ R
Subjt:  NLEKILSIDEIMASICSDRRKKPGKRPR

AT1G80245.2 Spc97 / Spc98 family of spindle pole body (SBP) component3.2e-2647.66Show/hide
Query:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLDS
        MEE  +ILKN R +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDLK+ R++G VLMEH +   R  + + L+ S       L+ CNLL +
Subjt:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLDS

Query:  NLEKILSIDEIMASICSDRRKKPGKRPR
        +++  + I+EI+  IC ++ KK  ++ R
Subjt:  NLEKILSIDEIMASICSDRRKKPGKRPR

AT1G80245.3 Spc97 / Spc98 family of spindle pole body (SBP) component3.2e-2647.66Show/hide
Query:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLDS
        MEE  +ILKN R +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDLK+ R++G VLMEH +   R  + + L+ S       L+ CNLL +
Subjt:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLDS

Query:  NLEKILSIDEIMASICSDRRKKPGKRPR
        +++  + I+EI+  IC ++ KK  ++ R
Subjt:  NLEKILSIDEIMASICSDRRKKPGKRPR

AT4G00695.1 FUNCTIONS IN: molecular_function unknown1.8e-2449.23Show/hide
Query:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENL-AEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLD
        MEE ++ILKN R +D++W CSLSESELDLLIS+K LV++RAK  G E+L A+KFDLKM R++G VLME+++   R  D + L+ S       L++CNLL 
Subjt:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENL-AEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLD

Query:  SNLEKILSIDEIMASICSDR-RKKPGKRPR
        ++++  + I+EI+  IC+ + +KK  KR R
Subjt:  SNLEKILSIDEIMASICSDR-RKKPGKRPR

AT4G00695.2 FUNCTIONS IN: molecular_function unknown1.8e-2449.23Show/hide
Query:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENL-AEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLD
        MEE ++ILKN R +D++W CSLSESELDLLIS+K LV++RAK  G E+L A+KFDLKM R++G VLME+++   R  D + L+ S       L++CNLL 
Subjt:  MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENL-AEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLD

Query:  SNLEKILSIDEIMASICSDR-RKKPGKRPR
        ++++  + I+EI+  IC+ + +KK  KR R
Subjt:  SNLEKILSIDEIMASICSDR-RKKPGKRPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGGCGAATGAAATTTTGAAGAATAAAAGAATTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGT
TCTCCAACGTGCAAAAGCAGTTGGTCATGAAAATTTAGCTGAGAAATTTGATTTGAAGATGCAACGAGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAGAACTTA
GGACATCGGATGTTTCGGATCTGTCCCAATCTGCCTTAAATGCGTGCAACTTGTTAGATAGCAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGCGAGTATCTGC
TCGGACAGAAGGAAGAAACCAGGAAAAAGGCCACGGGAAAAGGTTGATTCGAGATACAAGAACGACAAGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGGCGAATGAAATTTTGAAGAATAAAAGAATTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGT
TCTCCAACGTGCAAAAGCAGTTGGTCATGAAAATTTAGCTGAGAAATTTGATTTGAAGATGCAACGAGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAGAACTTA
GGACATCGGATGTTTCGGATCTGTCCCAATCTGCCTTAAATGCGTGCAACTTGTTAGATAGCAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGCGAGTATCTGC
TCGGACAGAAGGAAGAAACCAGGAAAAAGGCCACGGGAAAAGGTTGATTCGAGATACAAGAACGACAAGTTGTGA
Protein sequenceShow/hide protein sequence
MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASIC
SDRRKKPGKRPREKVDSRYKNDKL