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CSPI04G10840 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G10840
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNADH:ubiquinone oxidoreductase, ESSS subunit
Genome locationChr4:9135938..9137055
RNA-Seq ExpressionCSPI04G10840
SyntenyCSPI04G10840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK00850.1 uncharacterized protein E5676_scaffold509G00110 [Cucumis melo var. makuwa]2.8e-5498.15Show/hide
Query:  MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS
        MLRHR LSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTP PPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS
Subjt:  MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS

Query:  GSGSSESD
        GSGSSESD
Subjt:  GSGSSESD
XP_004150765.1 uncharacterized protein LOC101209235 [Cucumis sativus]1.5e-55100Show/hide
Query:  MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS
        MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS
Subjt:  MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS

Query:  GSGSSESD
        GSGSSESD
Subjt:  GSGSSESD
XP_008465110.1 PREDICTED: uncharacterized protein LOC103502799 [Cucumis melo]1.1e-5397.22Show/hide
Query:  MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS
        MLRHR LSSLRTRGGAAAGRSRWTSPGHEE PKGYLFNRTP PPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS
Subjt:  MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS

Query:  GSGSSESD
        GSGSSESD
Subjt:  GSGSSESD
XP_022928682.1 uncharacterized protein LOC111435525 [Cucurbita moschata]2.6e-5295.37Show/hide
Query:  MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS
        MLRHRLLSSLRTRGGAAAG+SRWTSPGHE+RPKGYLFNRTP PPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEME LGIS
Subjt:  MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS

Query:  GSGSSESD
        GS SSESD
Subjt:  GSGSSESD
XP_038881129.1 uncharacterized protein LOC120072731 [Benincasa hispida]3.1e-5395.37Show/hide
Query:  MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS
        MLRHRLL SLRTRGGAAAG+SRWTSPGHE+RPKGYLFNRTP PPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLG+S
Subjt:  MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS

Query:  GSGSSESD
        GSGSSESD
Subjt:  GSGSSESD
TrEMBL top hitse value%identityAlignment
A0A0A0KYE7 Uncharacterized protein7.1e-56100Show/hide
Query:  MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS
        MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS
Subjt:  MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS

Query:  GSGSSESD
        GSGSSESD
Subjt:  GSGSSESD
A0A1S3CN13 uncharacterized protein LOC1035027995.1e-5497.22Show/hide
Query:  MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS
        MLRHR LSSLRTRGGAAAGRSRWTSPGHEE PKGYLFNRTP PPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS
Subjt:  MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS

Query:  GSGSSESD
        GSGSSESD
Subjt:  GSGSSESD
A0A5A7VJ63 Uncharacterized protein5.1e-5497.22Show/hide
Query:  MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS
        MLRHR LSSLRTRGGAAAGRSRWTSPGHEE PKGYLFNRTP PPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS
Subjt:  MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS

Query:  GSGSSESD
        GSGSSESD
Subjt:  GSGSSESD
A0A5D3BP74 Uncharacterized protein1.3e-5498.15Show/hide
Query:  MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS
        MLRHR LSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTP PPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS
Subjt:  MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS

Query:  GSGSSESD
        GSGSSESD
Subjt:  GSGSSESD
A0A6J1EKL9 uncharacterized protein LOC1114355251.3e-5295.37Show/hide
Query:  MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS
        MLRHRLLSSLRTRGGAAAG+SRWTSPGHE+RPKGYLFNRTP PPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEME LGIS
Subjt:  MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGIS

Query:  GSGSSESD
        GS SSESD
Subjt:  GSGSSESD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G42310.1 unknown protein2.2e-4175.73Show/hide
Query:  LRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGISG
        LR+R+ S     G  +AG SRW +PGHEERPKGY  NRTP  PGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAHQKALERLEMEKL  +G
Subjt:  LRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGISG

Query:  SGS
          S
Subjt:  SGS
AT3G57785.1 unknown protein2.2e-4181.32Show/hide
Query:  GGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGISGSGS
        G  + G SRW +PGHEERPKGY  NRTP PPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAHQKALERLEMEKL  +G  S
Subjt:  GGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGISGSGS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCGACACCGCCTTCTCTCTTCACTCCGTACCCGTGGTGGAGCCGCCGCTGGACGGAGCCGGTGGACCAGTCCCGGCCACGAGGAACGCCCCAAGGGCTATCTTTT
CAATCGGACGCCGCTTCCACCAGGTCAGTCCCGTAAATGGGAGGATTGGGAGCTTCCTTGTTATGTTACTAGTTTTCTTACTATTGTGATTCTTGGCGTTGGCCTCAACG
CCAAGCCTGATCTCACAATTGAGACTTGGGCTCACCAGAAAGCCCTCGAGCGCCTTGAGATGGAGAAACTGGGTATATCTGGCTCCGGATCATCTGAATCCGATTGA
mRNA sequenceShow/hide mRNA sequence
TAACAATCTAACAAAATAACAAAATATAACAACAAATTATATTTACATTAATACATGTTTTTGGCAAAAGCCCACAAATTGAAGCCTCCAACGATCTCTCAACACATAGT
TAACGACCACCATGCAACCTGCAATAACAACTATGAAAAAGAAAAAGAAAATGAAGAAGTGAAAGAGGCAGAAAAGATTAGTATTTTAGTAATTCGAACTCAAAAGGATT
TAAGGAAAATGAGAAAACTTATTTTGAACCATTTTTGTTGGGGCCTTTTGTACAATTTATCTAAAAAATGTAAATCGAGAATCTCAAAACGACGACGTTTCGCCTTGTCG
ATAGACCACAAGTTCTCAGTATAACGCGACTGAATAATCCCTCTCTTTCTCTCTCGCTGGATCGCCCGCACAGTCGCTGAAATCGAAGGATCAATCCAAAACGCCCTCGC
CCACGCCGACTAGTGTCTGAAATATGCTCCGACACCGCCTTCTCTCTTCACTCCGTACCCGTGGTGGAGCCGCCGCTGGACGGAGCCGGTGGACCAGTCCCGGCCACGAG
GAACGCCCCAAGGGCTATCTTTTCAATCGGACGCCGCTTCCACCAGGTCAGTCCCGTAAATGGGAGGATTGGGAGCTTCCTTGTTATGTTACTAGTTTTCTTACTATTGT
GATTCTTGGCGTTGGCCTCAACGCCAAGCCTGATCTCACAATTGAGACTTGGGCTCACCAGAAAGCCCTCGAGCGCCTTGAGATGGAGAAACTGGGTATATCTGGCTCCG
GATCATCTGAATCCGATTGAATTTCGTGATCCTTATGCACTTTTGGGAACTGGGTTGTCTGATTTTGATTCCTCCGCTGAAAAGGGGTTTCGGATATATGTTGGGTTTCA
TGAGATGGTGTCGATATCCTGTAGTTCAATAAGTTTTTCTACATGTTTTTGCTGGCTCCTTTGGAGATTCAATAACTGGTTTATTTTTAATTGTTAGCTTCGGACATATT
TGACGTTGTAAATGTCAAGTGTTTAAGAATTTTAACTTTCTGCTATGTTATTCAGTTTCCAATGTGAATTATATATACGGATTCTCTAGTAATTTAGTTCTTTCTGGAAA
TCTTATGACATTGATTTT
Protein sequenceShow/hide protein sequence
MLRHRLLSSLRTRGGAAAGRSRWTSPGHEERPKGYLFNRTPLPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGISGSGSSESD