; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G11060 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G11060
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionATP-dependent DNA helicase
Genome locationChr4:9369416..9372765
RNA-Seq ExpressionCSPI04G11060
SyntenyCSPI04G11060
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0006281 - DNA repair (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0043138 - 3'-5' DNA helicase activity (molecular function)
InterPro domainsIPR002121 - HRDC domain
IPR010997 - HRDC-like superfamily
IPR018982 - RQC domain
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily
IPR044876 - HRDC domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041754.1 ATP-dependent DNA helicase RecQ-like [Cucumis melo var. makuwa]2.7e-10886.38Show/hide
Query:  MPVDILRGSTEKK-IRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSAL
        MPVDILRGS  KK +RY QFDKLPLYGLGREYSS WWKALASQLI NGYLTENIRDFYRTIGISAKGE FLNS RQDCQPPLVLP+ SEM GENED SAL
Subjt:  MPVDILRGSTEKK-IRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSAL

Query:  SEAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDG
        SE+GKMDNLATLKSGLSEAEEKLFQLLLEERMK+ARS RT PYAICGDQTV+RIAL RPSTKARLANIDGVN+HLL MHGDLILEAVKRLSQQVS SLDG
Subjt:  SEAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDG

Query:  EYRKPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN
        EYR+PN +RRPL+P +F+ WKMWHE GLS+QKIAN
Subjt:  EYRKPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN

XP_008442004.1 PREDICTED: ATP-dependent DNA helicase RecQ-like [Cucumis melo]2.7e-10886.38Show/hide
Query:  MPVDILRGSTEKK-IRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSAL
        MPVDILRGS  KK +RY QFDKLPLYGLGREYSS WWKALASQLI NGYLTENIRDFYRTIGISAKGE FLNS RQDCQPPLVLP+ SEM GENED SAL
Subjt:  MPVDILRGSTEKK-IRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSAL

Query:  SEAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDG
        SE+GKMDNLATLKSGLSEAEEKLFQLLLEERMK+ARS RT PYAICGDQTV+RIAL RPSTKARLANIDGVN+HLL MHGDLILEAVKRLSQQVS SLDG
Subjt:  SEAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDG

Query:  EYRKPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN
        EYR+PN +RRPL+P +F+ WKMWHE GLS+QKIAN
Subjt:  EYRKPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN

XP_008442016.1 PREDICTED: ATP-dependent DNA helicase RecQ-like isoform X2 [Cucumis melo]6.3e-10581.12Show/hide
Query:  MPVDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSALS
        MPVDILRGS  KKI  AQFDKLPL+GLGREYSS WWKALASQLI NGYLTE IRD YRTIGISAKGE FLNS RQDCQPPLVLPV S++IGENEDDSAL+
Subjt:  MPVDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSALS

Query:  EAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDGE
        EAGKMDNLATLKSGLSEAEEKLFQLLLEERMK+ARS  T PYA+CGDQTVKRIAL RPSTKARLANIDGVN+HLL MHGDLILEAVK LSQQVS SLDGE
Subjt:  EAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDGE

Query:  YR---------------KPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN
        YR               +PN +RRPL+PA+F+ WKMWHEDGLSIQKIAN
Subjt:  YR---------------KPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN

XP_011653461.2 uncharacterized protein LOC101222268 [Cucumis sativus]5.9e-12799.15Show/hide
Query:  MPVDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSALS
        MPVDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENI DFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSALS
Subjt:  MPVDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSALS

Query:  EAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDGE
        EAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQT+KRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDGE
Subjt:  EAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDGE

Query:  YRKPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN
        YRKPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN
Subjt:  YRKPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN

XP_011653463.2 uncharacterized protein LOC101222028 [Cucumis sativus]4.8e-10581.53Show/hide
Query:  MPVDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSALS
        MPVDILRGS  KKI   QFDKLPL+GLG+EYSS WWKALASQLI NGYLTENIRD YRTIGISAKGE FL+S RQDCQPPLVLPV SEMIGENEDDSAL 
Subjt:  MPVDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSALS

Query:  EAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDGE
        EAGKMDNLAT KSGLSEAEEKLFQLLLEERMK+ARS  T PYAICGDQTVKRIAL RPSTKARLANIDGVN+HLL MHGDLILEAVKRLSQQVS SLDGE
Subjt:  EAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDGE

Query:  YR---------------KPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN
        YR               +PN +RRPL+PA+F+ WKMWHEDGLSIQKIAN
Subjt:  YR---------------KPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN

TrEMBL top hitse value%identityAlignment
A0A1S3B4Q2 ATP-dependent DNA helicase3.0e-10581.12Show/hide
Query:  MPVDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSALS
        MPVDILRGS  KKI  AQFDKLPL+GLGREYSS WWKALASQLI NGYLTE IRD YRTIGISAKGE FLNS RQDCQPPLVLPV S++IGENEDDSAL+
Subjt:  MPVDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSALS

Query:  EAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDGE
        EAGKMDNLATLKSGLSEAEEKLFQLLLEERMK+ARS  T PYA+CGDQTVKRIAL RPSTKARLANIDGVN+HLL MHGDLILEAVK LSQQVS SLDGE
Subjt:  EAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDGE

Query:  YR---------------KPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN
        YR               +PN +RRPL+PA+F+ WKMWHEDGLSIQKIAN
Subjt:  YR---------------KPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN

A0A1S3B4Q5 ATP-dependent DNA helicase1.3e-10886.38Show/hide
Query:  MPVDILRGSTEKK-IRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSAL
        MPVDILRGS  KK +RY QFDKLPLYGLGREYSS WWKALASQLI NGYLTENIRDFYRTIGISAKGE FLNS RQDCQPPLVLP+ SEM GENED SAL
Subjt:  MPVDILRGSTEKK-IRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSAL

Query:  SEAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDG
        SE+GKMDNLATLKSGLSEAEEKLFQLLLEERMK+ARS RT PYAICGDQTV+RIAL RPSTKARLANIDGVN+HLL MHGDLILEAVKRLSQQVS SLDG
Subjt:  SEAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDG

Query:  EYRKPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN
        EYR+PN +RRPL+P +F+ WKMWHE GLS+QKIAN
Subjt:  EYRKPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN

A0A1S3B4R4 ATP-dependent DNA helicase3.0e-10581.12Show/hide
Query:  MPVDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSALS
        MPVDILRGS  KKI  AQFDKLPL+GLGREYSS WWKALASQLI NGYLTE IRD YRTIGISAKGE FLNS RQDCQPPLVLPV S++IGENEDDSAL+
Subjt:  MPVDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSALS

Query:  EAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDGE
        EAGKMDNLATLKSGLSEAEEKLFQLLLEERMK+ARS  T PYA+CGDQTVKRIAL RPSTKARLANIDGVN+HLL MHGDLILEAVK LSQQVS SLDGE
Subjt:  EAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDGE

Query:  YR---------------KPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN
        YR               +PN +RRPL+PA+F+ WKMWHEDGLSIQKIAN
Subjt:  YR---------------KPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN

A0A5A7TE95 DNA helicase1.3e-10886.38Show/hide
Query:  MPVDILRGSTEKK-IRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSAL
        MPVDILRGS  KK +RY QFDKLPLYGLGREYSS WWKALASQLI NGYLTENIRDFYRTIGISAKGE FLNS RQDCQPPLVLP+ SEM GENED SAL
Subjt:  MPVDILRGSTEKK-IRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSAL

Query:  SEAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDG
        SE+GKMDNLATLKSGLSEAEEKLFQLLLEERMK+ARS RT PYAICGDQTV+RIAL RPSTKARLANIDGVN+HLL MHGDLILEAVKRLSQQVS SLDG
Subjt:  SEAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDG

Query:  EYRKPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN
        EYR+PN +RRPL+P +F+ WKMWHE GLS+QKIAN
Subjt:  EYRKPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN

A0A5A7TI77 ATP-dependent DNA helicase3.0e-10581.12Show/hide
Query:  MPVDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSALS
        MPVDILRGS  KKI  AQFDKLPL+GLGREYSS WWKALASQLI NGYLTE IRD YRTIGISAKGE FLNS RQDCQPPLVLPV S++IGENEDDSAL+
Subjt:  MPVDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSALS

Query:  EAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDGE
        EAGKMDNLATLKSGLSEAEEKLFQLLLEERMK+ARS  T PYA+CGDQTVKRIAL RPSTKARLANIDGVN+HLL MHGDLILEAVK LSQQVS SLDGE
Subjt:  EAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDGE

Query:  YR---------------KPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN
        YR               +PN +RRPL+PA+F+ WKMWHEDGLSIQKIAN
Subjt:  YR---------------KPNRRRRPLSPARFKTWKMWHEDGLSIQKIAN

SwissProt top hitse value%identityAlignment
O93530 Werner syndrome ATP-dependent helicase homolog4.7e-1023.93Show/hide
Query:  MPVDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENI--RDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMI--------
        +PV  LRGST +++   +F    L+  G++ +  +WK LA QLI  GYL E+     F    G+++KG N+L     +  P L+LP  +E+         
Subjt:  MPVDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENI--RDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMI--------

Query:  -----------------------------GENEDDSALSEAGKMDNLATL-KSGLS--------------------EAEEKLFQLLLEERMKIARSVRTV
                                      E +D  +  EA ++   A + KS                       E +  L+  L+  R KIA     +
Subjt:  -----------------------------GENEDDSALSEAGKMDNLATL-KSGLS--------------------EAEEKLFQLLLEERMKIARSVRTV

Query:  PYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKR-----------LSQQVSQSLDGEYRKPNRRRRPLSPARFKTWKMWHEDGLSI
        P  +  ++ +  +A +RP+T   +  +DGV+     M   L LE VK             S  VSQS    +    + R  L  ++  ++ ++ E  LS+
Subjt:  PYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKR-----------LSQQVSQSLDGEYRKPNRRRRPLSPARFKTWKMWHEDGLSI

Query:  QKIAN
        +KIA+
Subjt:  QKIAN

P15043 ATP-dependent DNA helicase RecQ8.8e-0925.41Show/hide
Query:  VDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSALSEA
        V+++RG+  ++IR    DKL +YG+GR+ S + W ++  QLI+ G +T+NI                     Q     L       + GE+    A+   
Subjt:  VDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSALSEA

Query:  GKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVK
          +   A  KS     + KLF  L + R  IA      PY +  D T+  +A   P T + + +++GV    L   G   +  ++
Subjt:  GKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVK

P40724 ATP-dependent DNA helicase RecQ1.3e-0724.87Show/hide
Query:  VDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLP--------VMSEMIGENE
        V+++RG+  ++IR    DKL +YG+GRE S + W ++  QLI+ G + +NI   +  + ++      L   R D    L +P        VM +  G N 
Subjt:  VDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLP--------VMSEMIGENE

Query:  DDSALSEAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVK
        D                         KLF  L + R  IA      PY +  D T+  +A   P + + + +++GV    L   G   +  ++
Subjt:  DDSALSEAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVK

Q14191 Werner syndrome ATP-dependent helicase1.1e-0822.7Show/hide
Query:  MPVDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIR--DFYRTIGISAKGENFLNSTRQD------------CQPPLVLPVM
        +P+  LRGS  +++   Q+ +  L+G G++ +  WWKA + QLI  G+L E  R   F +   ++ KG N+L+    +            C   L+LP  
Subjt:  MPVDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIR--DFYRTIGISAKGENFLNSTRQD------------CQPPLVLPVM

Query:  SEMIGENEDDSALSE------AGKMDNLATL-----------------KSGLSEAEEK-------------------LFQLLLEERMKIARSVRTVPYAI
        S+ +     +   ++        K  NL  L                 KS + ++ EK                   L+  L+E R K A  +   P  +
Subjt:  SEMIGENEDDSALSE------AGKMDNLATL-----------------KSGLSEAEEK-------------------LFQLLLEERMKIARSVRTVPYAI

Query:  CGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLD-GEYRKPNRRRR----------PLSPARFKTWKMWHEDGLSIQKIA
          ++ +  +A +RP+T   +  IDGV+     M   L LE +K   Q  S   D     KP   ++           LS +   T+ ++ E  + ++ IA
Subjt:  CGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLD-GEYRKPNRRRR----------PLSPARFKTWKMWHEDGLSIQKIA

Query:  NTTL
         + +
Subjt:  NTTL

Q19546 Probable Werner syndrome ATP-dependent helicase homolog 16.1e-1025.66Show/hide
Query:  PVDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIR----DFYRTIGISAKGENFLNSTRQ---DCQP-----------PLVL
        P++ LRGS+++  R     +  L+G+G+    KWWKALA+ L   GYL E +R     F   I +S  GE +L + ++   D  P           P  +
Subjt:  PVDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIR----DFYRTIGISAKGENFLNSTRQ---DCQP-----------PLVL

Query:  P-------------VMSEMIGENEDDSALSEAGKMDNLATLK----SGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLAN
        P             + ++++G N+       A + + L  LK    +GL E  ++L   L + R+ IA      P+ I  +  +   A +RP++ + L  
Subjt:  P-------------VMSEMIGENEDDSALSEAGKMDNLATLK----SGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLAN

Query:  IDGVNRHLLTMHGDLILEAVKRLSQQ
        IDG++    + +G   ++ V + S++
Subjt:  IDGVNRHLLTMHGDLILEAVKRLSQQ

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGTGGATATTCTCCGTGGATCTACAGAAAAAAAGATACGCTATGCTCAGTTTGATAAGCTTCCACTTTATGGACTTGGAAGAGAGTACTCATCAAAATGGTGGAA
AGCACTAGCTAGTCAACTAATTTATAATGGCTATTTGACAGAGAACATACGCGATTTCTACAGAACCATAGGTATCAGTGCAAAAGGGGAAAATTTTCTCAATTCTACCA
GACAGGACTGCCAACCACCTCTAGTTTTGCCGGTGATGAGTGAAATGATTGGTGAAAATGAAGATGACAGTGCACTCAGTGAAGCTGGGAAAATGGATAATTTAGCCACT
TTGAAGAGTGGACTTTCAGAGGCTGAGGAAAAACTCTTTCAATTACTTTTAGAAGAGAGAATGAAGATTGCTAGAAGTGTTCGAACTGTCCCGTATGCCATATGTGGTGA
TCAAACAGTTAAAAGAATTGCATTGATTAGACCATCTACCAAGGCAAGATTAGCAAATATTGATGGTGTCAACCGGCATCTGCTAACAATGCACGGAGATCTAATTCTTG
AAGCAGTCAAGCGTCTATCACAACAAGTTAGTCAATCACTGGATGGAGAATATAGAAAGCCAAATCGACGACGACGACCATTGTCTCCAGCAAGGTTCAAAACTTGGAAA
ATGTGGCATGAAGATGGTCTCTCAATACAGAAAATTGCTAATACAACTCTGGAATGCTCAGAATTTAATTACTTTTCACCTGAAAGAAGTTTACTTCCTGAAAAAGAACA
AACTTCTTGA
mRNA sequenceShow/hide mRNA sequence
GGAAATTGTGATAACTGCATAGACTCAAAAAAGGAGCATGACGTGTCAAAAGAAGCATTTCTTCTACTGGCCTGCATCCAATCATGCTGGGGTACATGGGGACTGAACAT
GCCTGTGGATATTCTCCGTGGATCTACAGAAAAAAAGATACGCTATGCTCAGTTTGATAAGCTTCCACTTTATGGACTTGGAAGAGAGTACTCATCAAAATGGTGGAAAG
CACTAGCTAGTCAACTAATTTATAATGGCTATTTGACAGAGAACATACGCGATTTCTACAGAACCATAGGTATCAGTGCAAAAGGGGAAAATTTTCTCAATTCTACCAGA
CAGGACTGCCAACCACCTCTAGTTTTGCCGGTGATGAGTGAAATGATTGGTGAAAATGAAGATGACAGTGCACTCAGTGAAGCTGGGAAAATGGATAATTTAGCCACTTT
GAAGAGTGGACTTTCAGAGGCTGAGGAAAAACTCTTTCAATTACTTTTAGAAGAGAGAATGAAGATTGCTAGAAGTGTTCGAACTGTCCCGTATGCCATATGTGGTGATC
AAACAGTTAAAAGAATTGCATTGATTAGACCATCTACCAAGGCAAGATTAGCAAATATTGATGGTGTCAACCGGCATCTGCTAACAATGCACGGAGATCTAATTCTTGAA
GCAGTCAAGCGTCTATCACAACAAGTTAGTCAATCACTGGATGGAGAATATAGAAAGCCAAATCGACGACGACGACCATTGTCTCCAGCAAGGTTCAAAACTTGGAAAAT
GTGGCATGAAGATGGTCTCTCAATACAGAAAATTGCTAATACAACTCTGGAATGCTCAGAATTTAATTACTTTTCACCTGAAAGAAGTTTACTTCCTGAAAAAGAACAAA
CTTCTTGA
Protein sequenceShow/hide protein sequence
MPVDILRGSTEKKIRYAQFDKLPLYGLGREYSSKWWKALASQLIYNGYLTENIRDFYRTIGISAKGENFLNSTRQDCQPPLVLPVMSEMIGENEDDSALSEAGKMDNLAT
LKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQTVKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDGEYRKPNRRRRPLSPARFKTWK
MWHEDGLSIQKIANTTLECSEFNYFSPERSLLPEKEQTS