; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G11130 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G11130
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionbinding partner of ACD11 1-like
Genome locationChr4:9426918..9430837
RNA-Seq ExpressionCSPI04G11130
SyntenyCSPI04G11130
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK08404.1 binding partner of ACD11 1-like isoform X2 [Cucumis melo var. makuwa]4.6e-12196.34Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMY
        MQSQTRTVQVKHVSNLATEREINEFFSFSG+IE IEIQCEQG+SRTAFVTFRDPKALEIALLLSGATIVDQ VSISPVENHVPRREMQDSGSQ SSGKMY
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMY

Query:  VNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKT
        VNRAQEVVANVLAKGS IGQDAMNKAKAFDEKH+LTA+ASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKL+DTGSAVKT
Subjt:  VNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKT

Query:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKVRL
        SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKVRL
Subjt:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKVRL

XP_004149115.1 binding partner of ACD11 1 isoform X1 [Cucumis sativus]4.4e-12499.59Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMY
        MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMY
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMY

Query:  VNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKT
        VNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKT
Subjt:  VNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKT

Query:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
        SKYVTASAAWLNGAFGK+AKAGQAAGTKTREKFHLAMSNLTSK
Subjt:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK

XP_008441995.1 PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo]4.4e-11689.31Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQ------------
        MQSQTRTVQVKHVSNLATEREINEFFSFSG+IE IEIQCEQG+SRTAFVTFRDPKALEIALLLSGATIVDQ VSISPVENHVPRREMQ            
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQ------------

Query:  -------DSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTR
               DSGSQ SSGKMYVNRAQEVVANVLAKGS IGQDAMNKAKAFDEKH+LTA+ASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTR
Subjt:  -------DSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTR

Query:  AAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
        AAIFAAERKL+DTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
Subjt:  AAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK

XP_008441996.1 PREDICTED: binding partner of ACD11 1-like isoform X2 [Cucumis melo]1.5e-11996.3Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMY
        MQSQTRTVQVKHVSNLATEREINEFFSFSG+IE IEIQCEQG+SRTAFVTFRDPKALEIALLLSGATIVDQ VSISPVENHVPRREMQDSGSQ SSGKMY
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMY

Query:  VNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKT
        VNRAQEVVANVLAKGS IGQDAMNKAKAFDEKH+LTA+ASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKL+DTGSAVKT
Subjt:  VNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKT

Query:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
        SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
Subjt:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK

XP_011653468.1 binding partner of ACD11 1 isoform X2 [Cucumis sativus]1.5e-12499.59Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMY
        MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMY
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMY

Query:  VNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKT
        VNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKT
Subjt:  VNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKT

Query:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKV
        SKYVTASAAWLNGAFGK+AKAGQAAGTKTREKFHLAMSNLTSKV
Subjt:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKV

TrEMBL top hitse value%identityAlignment
A0A0A0KYL6 RRM domain-containing protein2.1e-12499.59Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMY
        MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMY
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMY

Query:  VNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKT
        VNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKT
Subjt:  VNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKT

Query:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
        SKYVTASAAWLNGAFGK+AKAGQAAGTKTREKFHLAMSNLTSK
Subjt:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK

A0A1S3B5B6 binding partner of ACD11 1-like isoform X12.1e-11689.31Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQ------------
        MQSQTRTVQVKHVSNLATEREINEFFSFSG+IE IEIQCEQG+SRTAFVTFRDPKALEIALLLSGATIVDQ VSISPVENHVPRREMQ            
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQ------------

Query:  -------DSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTR
               DSGSQ SSGKMYVNRAQEVVANVLAKGS IGQDAMNKAKAFDEKH+LTA+ASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTR
Subjt:  -------DSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTR

Query:  AAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
        AAIFAAERKL+DTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
Subjt:  AAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK

A0A1S3B5F3 binding partner of ACD11 1-like isoform X27.1e-12096.3Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMY
        MQSQTRTVQVKHVSNLATEREINEFFSFSG+IE IEIQCEQG+SRTAFVTFRDPKALEIALLLSGATIVDQ VSISPVENHVPRREMQDSGSQ SSGKMY
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMY

Query:  VNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKT
        VNRAQEVVANVLAKGS IGQDAMNKAKAFDEKH+LTA+ASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKL+DTGSAVKT
Subjt:  VNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKT

Query:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
        SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
Subjt:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK

A0A5A7V2T9 Binding partner of ACD11 1-like isoform X13.6e-11684.64Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQ------------
        MQSQTRTVQVKHVSNLATEREINEFFSFSG+IE IEIQCEQG+SRTAFVTFRDPKALEIALLLSGATIVDQ VSISPVENHVPRREMQ            
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQ------------

Query:  ----------------------DSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEK
                              DSGSQ SSGKMYVNRAQEVVANVLAKGS IGQDAMNKAKAFDEKH+LTA+ASAKVLSFDRRVGLTEKLTVGISVVNEK
Subjt:  ----------------------DSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEK

Query:  VKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKVRL
        VKSVDQNLHVSDKTRAAIFAAERKL+DTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKVRL
Subjt:  VKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKVRL

A0A5D3CB19 Binding partner of ACD11 1-like isoform X22.2e-12196.34Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMY
        MQSQTRTVQVKHVSNLATEREINEFFSFSG+IE IEIQCEQG+SRTAFVTFRDPKALEIALLLSGATIVDQ VSISPVENHVPRREMQDSGSQ SSGKMY
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMY

Query:  VNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKT
        VNRAQEVVANVLAKGS IGQDAMNKAKAFDEKH+LTA+ASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKL+DTGSAVKT
Subjt:  VNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKT

Query:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKVRL
        SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKVRL
Subjt:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKVRL

SwissProt top hitse value%identityAlignment
P87216 Protein vip19.2e-0823.01Show/hide
Query:  VQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMYVNRAQEV
        V V ++S   TE++I++FFSF G++  I  + + G+++TA + F  P A + ALLL  A +    + I+  +        Q       + +        +
Subjt:  VQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMYVNRAQEV

Query:  VANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKTSKYVTAS
        ++ +L++G  +    + K+   D+ + +++             G+ E    G+  VNE+    ++   V +K     FA   KLN T S V T  +    
Subjt:  VANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKTSKYVTAS

Query:  AAWLNGAFGKVAKAGQAAGTKTREKF
         A           AG +AG K +  +
Subjt:  AAWLNGAFGKVAKAGQAAGTKTREKF

Q9LFD5 Binding partner of ACD11 11.3e-4946.61Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENH----VPRREMQDSGSQSSS
        M SQ R+V+V ++S+ ATE +I EFFSFSG++E I+I   Q +  +A+VTF++ +  E A+LLSGA+I DQ V I    N+     P  E Q SG++S  
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENH----VPRREMQDSGSQSSS

Query:  GKMYVNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGS
            V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T+ A+A V S D+++GL++KLT G S+VNEK+K+VDQN  V+++T++   AAE+ ++  GS
Subjt:  GKMYVNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGS

Query:  AVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
        AV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  AVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.8e-5247.13Show/hide
Query:  TVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQ--IVSISPVENHVPRR----EMQDSGSQSSSGKMY
        TV+V +VS  AT+R++ EFFSFSG I  +E Q E   ++ A+VTF+D +  E A+LLSGATIVD   IVS++P     P      E +DS     +G   
Subjt:  TVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQ--IVSISPVENHVPRR----EMQDSGSQSSSGKMY

Query:  VNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKT
        + +A++VV+++LAKG  +G+DA+ KAK+ DEKHQLT+ ASAKV SFD+++G T+K+  G  VV EKV+ VDQ   VS+KT++AI AAE+ +++ GSA+  
Subjt:  VNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKT

Query:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKV
        ++YV   A W+ GAF KVAKA +  G K +EK  +A      KV
Subjt:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKV

AT5G16840.1 binding partner of acd11 19.0e-5146.61Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENH----VPRREMQDSGSQSSS
        M SQ R+V+V ++S+ ATE +I EFFSFSG++E I+I   Q +  +A+VTF++ +  E A+LLSGA+I DQ V I    N+     P  E Q SG++S  
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENH----VPRREMQDSGSQSSS

Query:  GKMYVNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGS
            V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T+ A+A V S D+++GL++KLT G S+VNEK+K+VDQN  V+++T++   AAE+ ++  GS
Subjt:  GKMYVNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGS

Query:  AVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
        AV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  AVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

AT5G16840.2 binding partner of acd11 16.9e-5146.61Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENH----VPRREMQDSGSQSSS
        M SQ R+V+V ++S+ ATE +I EFFSFSG++E I+IQ    +  +A+VTF++ +  E A+LLSGA+I DQ V I    N+     P  E Q SG++S  
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENH----VPRREMQDSGSQSSS

Query:  GKMYVNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGS
            V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T+ A+A V S D+++GL++KLT G S+VNEK+K+VDQN  V+++T++   AAE+ ++  GS
Subjt:  GKMYVNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGS

Query:  AVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
        AV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  AVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

AT5G32450.1 RNA binding (RRM/RBD/RNP motifs) family protein2.2e-8970.54Show/hide
Query:  TRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRRE--------------MQDS
        TR+VQV +VS+LATEREI+EFFSFSG IE IEIQ E G SR AFVTF DPKALEIALLLSGATIVDQIV+I+  EN+V RRE              +Q+S
Subjt:  TRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRRE--------------MQDS

Query:  GSQS-----SSGKMYVNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIF
         +Q+      + + YV++AQ+VVA VLAKGSA+GQDA+NKAKAFDEKHQL ANASAKV SFD+RVGLTEKL+VGIS VNEKVKSVDQ L VSDKT AAIF
Subjt:  GSQS-----SSGKMYVNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIF

Query:  AAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
        AAERKLNDTGSAVK+S+YVTA AAW +GAF KVA+ GQ AG+KT+EKF+LA+SN++SK
Subjt:  AAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.0e-5045Show/hide
Query:  TVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSIS-------PVENHVPRREMQDSGSQSSSGKM
        TV+V +VS  ATER++ EFFSFSG I  +E Q E   S+ A+VTF+D +  E A+LL+G+TIVD  V+++       P +       +++S   SS  + 
Subjt:  TVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSIS-------PVENHVPRREMQDSGSQSSSGKM

Query:  YVN---RAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGS
         V+   +A++VV+ +++KG  +G+DA+ KAK+ DEKHQLT+ ASA+V SFD+R+G TEK+  G +VV+EKVK VDQ   V++KT++AI AAE+ +++ GS
Subjt:  YVN---RAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGS

Query:  AVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLA
        A+  ++YV   A W+ GAF +V+KA +  G K +EK  LA
Subjt:  AVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCTCAGACTCGGACGGTTCAAGTCAAGCACGTTTCGAATCTAGCTACTGAGAGGGAGATAAACGAGTTCTTCTCCTTCTCTGGACAAATTGAACGCATTGAGAT
TCAATGTGAACAAGGGGATTCCAGGACTGCGTTCGTCACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGCTATTATCGGGAGCGACAATTGTAGATCAGATTGTGA
GCATATCTCCTGTTGAAAATCATGTACCAAGAAGAGAAATGCAGGATTCTGGAAGCCAGTCTAGCAGTGGAAAAATGTATGTTAATAGAGCTCAAGAAGTAGTTGCAAAT
GTGCTTGCTAAGGGTTCAGCAATCGGACAAGATGCCATGAACAAAGCAAAGGCATTTGACGAAAAGCATCAGCTAACAGCTAATGCATCTGCAAAGGTATTGTCCTTTGA
CAGAAGAGTTGGGCTGACAGAGAAATTGACGGTTGGGATATCAGTGGTTAACGAGAAAGTCAAGTCTGTCGATCAAAATCTTCACGTTTCAGATAAAACAAGGGCTGCAA
TCTTTGCAGCTGAGAGGAAACTCAATGACACAGGATCTGCTGTTAAAACAAGCAAGTATGTGACAGCAAGTGCTGCTTGGCTAAATGGTGCTTTTGGCAAGGTCGCAAAA
GCAGGGCAGGCAGCGGGAACAAAAACTAGAGAGAAATTCCATTTGGCCATGTCAAACTTAACTTCAAAGGTGCGTTTATGA
mRNA sequenceShow/hide mRNA sequence
CTTGCTTTTTATCTCTCTCACGCTCTGTCGAGTGATTCTTTCTTTCAAATTGCTTCCAACCTCCAACCTCTACAACTTCCTCTCTATCTCTACAAGAAATTCGCCAAATT
CTTCAATCATTAGCTATGCAGTCTCAGACTCGGACGGTTCAAGTCAAGCACGTTTCGAATCTAGCTACTGAGAGGGAGATAAACGAGTTCTTCTCCTTCTCTGGACAAAT
TGAACGCATTGAGATTCAATGTGAACAAGGGGATTCCAGGACTGCGTTCGTCACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGCTATTATCGGGAGCGACAATTG
TAGATCAGATTGTGAGCATATCTCCTGTTGAAAATCATGTACCAAGAAGAGAAATGCAGGATTCTGGAAGCCAGTCTAGCAGTGGAAAAATGTATGTTAATAGAGCTCAA
GAAGTAGTTGCAAATGTGCTTGCTAAGGGTTCAGCAATCGGACAAGATGCCATGAACAAAGCAAAGGCATTTGACGAAAAGCATCAGCTAACAGCTAATGCATCTGCAAA
GGTATTGTCCTTTGACAGAAGAGTTGGGCTGACAGAGAAATTGACGGTTGGGATATCAGTGGTTAACGAGAAAGTCAAGTCTGTCGATCAAAATCTTCACGTTTCAGATA
AAACAAGGGCTGCAATCTTTGCAGCTGAGAGGAAACTCAATGACACAGGATCTGCTGTTAAAACAAGCAAGTATGTGACAGCAAGTGCTGCTTGGCTAAATGGTGCTTTT
GGCAAGGTCGCAAAAGCAGGGCAGGCAGCGGGAACAAAAACTAGAGAGAAATTCCATTTGGCCATGTCAAACTTAACTTCAAAGGTGCGTTTATGAATGGCGACGTAAAA
GTTAGGATTTTCTTGAACTGGGT
Protein sequenceShow/hide protein sequence
MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMYVNRAQEVVAN
VLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAK
AGQAAGTKTREKFHLAMSNLTSKVRL