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CSPI04G11260 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G11260
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPatatin
Genome locationChr4:9552260..9552601
RNA-Seq ExpressionCSPI04G11260
SyntenyCSPI04G11260
Gene Ontology termsGO:0019433 - triglyceride catabolic process (biological process)
GO:0055088 - lipid homeostasis (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005811 - lipid droplet (cellular component)
GO:0016020 - membrane (cellular component)
GO:0004806 - triglyceride lipase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600351.1 Patatin-like phospholipase domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]5.0e-2261.68Show/hide
Query:  LFSIFHPFSSPITNPNLNFTHRFPLPLHPQTLHFISNSSSSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSNFVSMFDNR
        L SI  PFSSPITNPNLNFTHR+ LPL  QTL F SNSSSS  P P PPPPDPI EK+S         VATG+L LG+  RLI  SS ++SN V+MF+NR
Subjt:  LFSIFHPFSSPITNPNLNFTHRFPLPLHPQTLHFISNSSSSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSNFVSMFDNR

Query:  SGNVYMY
        SG    Y
Subjt:  SGNVYMY

XP_004149962.1 patatin-like phospholipase domain-containing protein 2 [Cucumis sativus]7.4e-3476.85Show/hide
Query:  MTPLHLFSIFHPFSSPITNPNLNFTHRFPLPLHPQTLHFISNSSSSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSNFVS
        M P HL SI HPFSSPITNPNLNFTHRF LPL  QTL FISNSSSSPPP PSPPPPDPI EKRS         VATGELFLG+  RLIK SSDQTS  VS
Subjt:  MTPLHLFSIFHPFSSPITNPNLNFTHRFPLPLHPQTLHFISNSSSSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSNFVS

Query:  MFDNRSGN
        MFDNRSGN
Subjt:  MFDNRSGN

XP_008456089.1 PREDICTED: patatin-like phospholipase domain-containing protein 2 [Cucumis melo]2.0e-3175.68Show/hide
Query:  MTPLHLFSIFHPF-SSPITNPNLNFTHRFPLPLHPQTLHFISN--SSSSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSN
        M P HL SI HPF SSPITNPNLNFT RFPLPL  QTL FISN  SSSSPPP PSPPPPDPI EKRS       L VATGELFLG+  RLIK SSDQTSN
Subjt:  MTPLHLFSIFHPF-SSPITNPNLNFTHRFPLPLHPQTLHFISN--SSSSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSN

Query:  FVSMFDNRSGN
         VSMFDNR+GN
Subjt:  FVSMFDNRSGN

XP_022943045.1 patatin-like phospholipase domain-containing protein 2 [Cucurbita moschata]2.0e-2362.96Show/hide
Query:  LFSIFHPFSSPITNPNLNFTHRFPLPLHPQTLHFISN-SSSSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSNFVSMFDN
        L SI  PFSSPITNPNLNFTHR+ LPL  QTL F SN SSSS PPQP PPPPDPI EK+S         VATG+L LG+  RLI  SS ++SN V+MF+N
Subjt:  LFSIFHPFSSPITNPNLNFTHRFPLPLHPQTLHFISN-SSSSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSNFVSMFDN

Query:  RSGNVYMY
        RSG    Y
Subjt:  RSGNVYMY

XP_038878130.1 patatin-like phospholipase domain-containing protein 4 [Benincasa hispida]4.7e-2867.57Show/hide
Query:  MTPLHLFSIFHPFSSPITNPNLNFTHRFPLPLHPQTLHFISNSS---SSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSN
        M P  L SI HPFSSPITNPN NFT+R+ LPL  QTL FISNSS   SSPPP P PPPPDPI EK+S       L VATGELFLG+  RLI  SSD+T+N
Subjt:  MTPLHLFSIFHPFSSPITNPNLNFTHRFPLPLHPQTLHFISNSS---SSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSN

Query:  FVSMFDNRSGN
         V+MFDNRSGN
Subjt:  FVSMFDNRSGN

TrEMBL top hitse value%identityAlignment
A0A0A0L1C8 Uncharacterized protein2.5e-5193.81Show/hide
Query:  MTPLHLFSIFHPFSSPITNPNLNFTHRFPLPLHPQTLHFISNSSSSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSNFVS
        MTP HLFSIFHPFSSPI NPNLNFTH FPLPL PQTLHFISNSSSSPPP PSPPPPDPI EKRSIVVAT ELVVATGELFLGMPVRLIKHSSDQTSNFVS
Subjt:  MTPLHLFSIFHPFSSPITNPNLNFTHRFPLPLHPQTLHFISNSSSSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSNFVS

Query:  MFDNRSGNVYMYV
        MFDNRSGNVYMYV
Subjt:  MFDNRSGNVYMYV

A0A0A0L746 Patatin3.6e-3476.85Show/hide
Query:  MTPLHLFSIFHPFSSPITNPNLNFTHRFPLPLHPQTLHFISNSSSSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSNFVS
        M P HL SI HPFSSPITNPNLNFTHRF LPL  QTL FISNSSSSPPP PSPPPPDPI EKRS         VATGELFLG+  RLIK SSDQTS  VS
Subjt:  MTPLHLFSIFHPFSSPITNPNLNFTHRFPLPLHPQTLHFISNSSSSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSNFVS

Query:  MFDNRSGN
        MFDNRSGN
Subjt:  MFDNRSGN

A0A1S3C2I5 Patatin9.8e-3275.68Show/hide
Query:  MTPLHLFSIFHPF-SSPITNPNLNFTHRFPLPLHPQTLHFISN--SSSSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSN
        M P HL SI HPF SSPITNPNLNFT RFPLPL  QTL FISN  SSSSPPP PSPPPPDPI EKRS       L VATGELFLG+  RLIK SSDQTSN
Subjt:  MTPLHLFSIFHPF-SSPITNPNLNFTHRFPLPLHPQTLHFISN--SSSSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSN

Query:  FVSMFDNRSGN
         VSMFDNR+GN
Subjt:  FVSMFDNRSGN

A0A5A7T6F4 Patatin9.8e-3275.68Show/hide
Query:  MTPLHLFSIFHPF-SSPITNPNLNFTHRFPLPLHPQTLHFISN--SSSSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSN
        M P HL SI HPF SSPITNPNLNFT RFPLPL  QTL FISN  SSSSPPP PSPPPPDPI EKRS       L VATGELFLG+  RLIK SSDQTSN
Subjt:  MTPLHLFSIFHPF-SSPITNPNLNFTHRFPLPLHPQTLHFISN--SSSSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSN

Query:  FVSMFDNRSGN
         VSMFDNR+GN
Subjt:  FVSMFDNRSGN

A0A6J1FXB2 Patatin9.8e-2462.96Show/hide
Query:  LFSIFHPFSSPITNPNLNFTHRFPLPLHPQTLHFISN-SSSSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSNFVSMFDN
        L SI  PFSSPITNPNLNFTHR+ LPL  QTL F SN SSSS PPQP PPPPDPI EK+S         VATG+L LG+  RLI  SS ++SN V+MF+N
Subjt:  LFSIFHPFSSPITNPNLNFTHRFPLPLHPQTLHFISN-SSSSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSNFVSMFDN

Query:  RSGNVYMY
        RSG    Y
Subjt:  RSGNVYMY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCTCTTCATCTCTTTTCAATTTTCCATCCATTTTCTTCCCCAATTACAAACCCTAATCTCAATTTCACTCATAGATTTCCTCTTCCTCTACACCCTCAAACTCT
ACATTTCATTTCCAATTCTTCTTCTTCTCCACCACCCCAACCTTCTCCTCCTCCGCCCGATCCCATTCTGGAGAAGAGGTCCATCGTCGTAGCCACTAGAGAGCTCGTCG
TAGCCACCGGGGAGCTCTTTTTGGGTATGCCTGTGAGGTTGATTAAGCACTCTTCCGACCAAACCTCCAACTTCGTTTCTATGTTTGATAATCGCAGTGGGAACGTATAT
ATGTATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCCTCTTCATCTCTTTTCAATTTTCCATCCATTTTCTTCCCCAATTACAAACCCTAATCTCAATTTCACTCATAGATTTCCTCTTCCTCTACACCCTCAAACTCT
ACATTTCATTTCCAATTCTTCTTCTTCTCCACCACCCCAACCTTCTCCTCCTCCGCCCGATCCCATTCTGGAGAAGAGGTCCATCGTCGTAGCCACTAGAGAGCTCGTCG
TAGCCACCGGGGAGCTCTTTTTGGGTATGCCTGTGAGGTTGATTAAGCACTCTTCCGACCAAACCTCCAACTTCGTTTCTATGTTTGATAATCGCAGTGGGAACGTATAT
ATGTATGTTTGA
Protein sequenceShow/hide protein sequence
MTPLHLFSIFHPFSSPITNPNLNFTHRFPLPLHPQTLHFISNSSSSPPPQPSPPPPDPILEKRSIVVATRELVVATGELFLGMPVRLIKHSSDQTSNFVSMFDNRSGNVY
MYV