; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G12080 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G12080
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationChr4:10389551..10390644
RNA-Seq ExpressionCSPI04G12080
SyntenyCSPI04G12080
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR000953 - Chromo/chromo shadow domain
IPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR016197 - Chromo-like domain superfamily
IPR023780 - Chromo domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033666.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]5.9e-9858.57Show/hide
Query:  MRHPFSAKH-AVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYN
        ++HPFSAK  A+ FID  V++HG P SII+D DKIFLSNFWKELFA+MGT+LKRS  FHPQTDGQTERVN+CLETYLR F N +P KWD+ IPWA+LWYN
Subjt:  MRHPFSAKH-AVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYN

Query:  TTFHASTKTTPFQAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKEN--------------------------------------LSRKQCEKL
        TTFHASTKTTPF+AVYGRP PPLLSYG K+T NNEVE+MLKERDLALNALKEN                                      L+RK+ EKL
Subjt:  TTFHASTKTTPFQAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKEN--------------------------------------LSRKQCEKL

Query:  APKYYGPYKIIEENGKVAYRLLLPPEAIIHN---------------------------------PDTVLGIHWNQELEGNEWLVKWKGLLDNEATWESIF
        AP+YYGPYKIIEE G VAYRL LPPEA IHN                                 P+ VLGI WN+EL  NEWL+KW+GL +++ATWES++
Subjt:  APKYYGPYKIIEENGKVAYRLLLPPEAIIHN---------------------------------PDTVLGIHWNQELEGNEWLVKWKGLLDNEATWESIF

Query:  QMSQQFPNFHLEDKGIIEKEG
        QM+QQFP+FHLEDK  +E  G
Subjt:  QMSQQFPNFHLEDKGIIEKEG

KAA0039128.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]5.0e-9758.57Show/hide
Query:  MRHPFSAKH-AVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYN
        ++HPFSAK  A+ FID  VR+HG P SII+D DKIFLSNFW+ELFA+MGT+LKRS AFHPQTDGQTERVN+CLETYLR F N +P KWD+ IPWA+LWYN
Subjt:  MRHPFSAKH-AVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYN

Query:  TTFHASTKTTPFQAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKEN--------------------------------------LSRKQCEKL
        TTFHASTKTTPF+AVYGR  PPLLSYG K+T NNEVE+MLKERD ALNALKEN                                      L+RK+ EKL
Subjt:  TTFHASTKTTPFQAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKEN--------------------------------------LSRKQCEKL

Query:  APKYYGPYKIIEENGKVAYRLLLPPEAIIHN---------------------------------PDTVLGIHWNQELEGNEWLVKWKGLLDNEATWESIF
        AP+YYGPYKIIEE G VAYRL LPPEA IHN                                 P+ VLGI WN+EL  NEWL+KW+GL ++EATWES++
Subjt:  APKYYGPYKIIEENGKVAYRLLLPPEAIIHN---------------------------------PDTVLGIHWNQELEGNEWLVKWKGLLDNEATWESIF

Query:  QMSQQFPNFHLEDKGIIEKEG
        QM+QQFP+FHLEDK  +E  G
Subjt:  QMSQQFPNFHLEDKGIIEKEG

KAA0048169.1 disease resistance protein [Cucumis melo var. makuwa]2.5e-9657.94Show/hide
Query:  MRHPFSAKH-AVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYN
        ++HPFS K  A+ FID  VR+HG P SII+DGDKIFLSNFW+ELFA+MGT+LKRS  FHPQTDGQTERVN+CLETYLR F N +P KWD+ IPWA+LWYN
Subjt:  MRHPFSAKH-AVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYN

Query:  TTFHASTKTTPFQAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKEN--------------------------------------LSRKQCEKL
        TTFHASTKTTPF+AVYGR  PPLLSYG K+T NNEVE+MLKERD ALNALKEN                                      L+RK+ EKL
Subjt:  TTFHASTKTTPFQAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKEN--------------------------------------LSRKQCEKL

Query:  APKYYGPYKIIEENGKVAYRLLLPPEAIIHN---------------------------------PDTVLGIHWNQELEGNEWLVKWKGLLDNEATWESIF
        AP+YYGPYKIIEE G VAY+L LPPEA IHN                                 P+ VLGI WN+EL  NEWLVKW+GL +++ATWES++
Subjt:  APKYYGPYKIIEENGKVAYRLLLPPEAIIHN---------------------------------PDTVLGIHWNQELEGNEWLVKWKGLLDNEATWESIF

Query:  QMSQQFPNFHLEDKGIIEKEG
        QM+QQFP+FHLEDK  +E  G
Subjt:  QMSQQFPNFHLEDKGIIEKEG

KAE8637598.1 hypothetical protein CSA_022681 [Cucumis sativus]1.8e-9958.88Show/hide
Query:  MRHPFSAKH-AVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYN
        ++HP++AK  A IF++  V KHGIPKSIITD DKIFLSNFWKELF TMGTILKRS AFHPQTDGQTERVNRCLETYLR F N +PKKWDK IPWA+LWYN
Subjt:  MRHPFSAKH-AVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYN

Query:  TTFHASTKTTPFQAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKEN--------------------------------------LSRKQCEKL
        TTFHASTKTTP+Q+V+GR  PPLLSYG KQ+PNN+VE+MLKERDLALNAL+EN                                      L+RK+CEKL
Subjt:  TTFHASTKTTPFQAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKEN--------------------------------------LSRKQCEKL

Query:  APKYYGPYKIIEENGKVAYRLLLPPEAIIHN---------------------------------PDTVLGIHWNQELEGNEWLVKWKGLLDNEATWESIF
        +PK+YGPY++IEE G+VAYRL LPPEA IHN                                 P+ VLGI WN+EL GNEWL+KWK L D+EATWES++
Subjt:  APKYYGPYKIIEENGKVAYRLLLPPEAIIHN---------------------------------PDTVLGIHWNQELEGNEWLVKWKGLLDNEATWESIF

Query:  QMSQQFPNFHLEDKGIIEKEG
         ++QQFP FHLEDK  +E  G
Subjt:  QMSQQFPNFHLEDKGIIEKEG

TYK15071.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.2e-9658.26Show/hide
Query:  MRHPFSAKH-AVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYN
        M+HPFSAK  A+ FID  VR+HGIPKSII+D DKIF+SNFWKELF  M TILKRS AFHPQTDGQTERVN+CLETYLR F N +P KW + IPWA+LWYN
Subjt:  MRHPFSAKH-AVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYN

Query:  TTFHASTKTTPFQAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKEN--------------------------------------LSRKQCEKL
        TTFH+ST+TTPFQ VYGRP PPL+SYG K+TPN+EVE +LKERDLA++ALKEN                                      L+RK+ EKL
Subjt:  TTFHASTKTTPFQAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKEN--------------------------------------LSRKQCEKL

Query:  APKYYGPYKIIEENGKVAYRLLLPPEAIIHN---------------------------------PDTVLGIHWNQELEGNEWLVKWKGLLDNEATWESIF
        APKYYGPY+IIE  G+VAYRL LPPEA IHN                                 P+TVLGI W+ EL  NEWLVKWKGL D+EATWES++
Subjt:  APKYYGPYKIIEENGKVAYRLLLPPEAIIHN---------------------------------PDTVLGIHWNQELEGNEWLVKWKGLLDNEATWESIF

Query:  QMSQQFPNFHLEDKGIIEKEG
         M+QQFP+FHLEDK I+E  G
Subjt:  QMSQQFPNFHLEDKGIIEKEG

TrEMBL top hitse value%identityAlignment
A0A5A7SUN8 Transposon Ty3-G Gag-Pol polyprotein2.9e-9858.57Show/hide
Query:  MRHPFSAKH-AVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYN
        ++HPFSAK  A+ FID  V++HG P SII+D DKIFLSNFWKELFA+MGT+LKRS  FHPQTDGQTERVN+CLETYLR F N +P KWD+ IPWA+LWYN
Subjt:  MRHPFSAKH-AVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYN

Query:  TTFHASTKTTPFQAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKEN--------------------------------------LSRKQCEKL
        TTFHASTKTTPF+AVYGRP PPLLSYG K+T NNEVE+MLKERDLALNALKEN                                      L+RK+ EKL
Subjt:  TTFHASTKTTPFQAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKEN--------------------------------------LSRKQCEKL

Query:  APKYYGPYKIIEENGKVAYRLLLPPEAIIHN---------------------------------PDTVLGIHWNQELEGNEWLVKWKGLLDNEATWESIF
        AP+YYGPYKIIEE G VAYRL LPPEA IHN                                 P+ VLGI WN+EL  NEWL+KW+GL +++ATWES++
Subjt:  APKYYGPYKIIEENGKVAYRLLLPPEAIIHN---------------------------------PDTVLGIHWNQELEGNEWLVKWKGLLDNEATWESIF

Query:  QMSQQFPNFHLEDKGIIEKEG
        QM+QQFP+FHLEDK  +E  G
Subjt:  QMSQQFPNFHLEDKGIIEKEG

A0A5A7T8C0 Ty3/gypsy retrotransposon protein2.4e-9758.57Show/hide
Query:  MRHPFSAKH-AVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYN
        ++HPFSAK  A+ FID  VR+HG P SII+D DKIFLSNFW+ELFA+MGT+LKRS AFHPQTDGQTERVN+CLETYLR F N +P KWD+ IPWA+LWYN
Subjt:  MRHPFSAKH-AVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYN

Query:  TTFHASTKTTPFQAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKEN--------------------------------------LSRKQCEKL
        TTFHASTKTTPF+AVYGR  PPLLSYG K+T NNEVE+MLKERD ALNALKEN                                      L+RK+ EKL
Subjt:  TTFHASTKTTPFQAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKEN--------------------------------------LSRKQCEKL

Query:  APKYYGPYKIIEENGKVAYRLLLPPEAIIHN---------------------------------PDTVLGIHWNQELEGNEWLVKWKGLLDNEATWESIF
        AP+YYGPYKIIEE G VAYRL LPPEA IHN                                 P+ VLGI WN+EL  NEWL+KW+GL ++EATWES++
Subjt:  APKYYGPYKIIEENGKVAYRLLLPPEAIIHN---------------------------------PDTVLGIHWNQELEGNEWLVKWKGLLDNEATWESIF

Query:  QMSQQFPNFHLEDKGIIEKEG
        QM+QQFP+FHLEDK  +E  G
Subjt:  QMSQQFPNFHLEDKGIIEKEG

A0A5A7U3Z6 Disease resistance protein1.2e-9657.94Show/hide
Query:  MRHPFSAKH-AVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYN
        ++HPFS K  A+ FID  VR+HG P SII+DGDKIFLSNFW+ELFA+MGT+LKRS  FHPQTDGQTERVN+CLETYLR F N +P KWD+ IPWA+LWYN
Subjt:  MRHPFSAKH-AVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYN

Query:  TTFHASTKTTPFQAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKEN--------------------------------------LSRKQCEKL
        TTFHASTKTTPF+AVYGR  PPLLSYG K+T NNEVE+MLKERD ALNALKEN                                      L+RK+ EKL
Subjt:  TTFHASTKTTPFQAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKEN--------------------------------------LSRKQCEKL

Query:  APKYYGPYKIIEENGKVAYRLLLPPEAIIHN---------------------------------PDTVLGIHWNQELEGNEWLVKWKGLLDNEATWESIF
        AP+YYGPYKIIEE G VAY+L LPPEA IHN                                 P+ VLGI WN+EL  NEWLVKW+GL +++ATWES++
Subjt:  APKYYGPYKIIEENGKVAYRLLLPPEAIIHN---------------------------------PDTVLGIHWNQELEGNEWLVKWKGLLDNEATWESIF

Query:  QMSQQFPNFHLEDKGIIEKEG
        QM+QQFP+FHLEDK  +E  G
Subjt:  QMSQQFPNFHLEDKGIIEKEG

A0A5A7UYM1 Ty3/gypsy retrotransposon protein2.7e-9657.94Show/hide
Query:  MRHPFSAKH-AVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYN
        ++HPFSAK  A+ FID  VR+HGIP SII+D DKIFLSNFW+ELFA+MGT+LKRS AFHPQTDGQTERVN+CLETYLR F N +P KWD+ IPWA+LWYN
Subjt:  MRHPFSAKH-AVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYN

Query:  TTFHASTKTTPFQAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKEN--------------------------------------LSRKQCEKL
        T FHASTKTTPF+AVYGR  PPLLSYG K+T NNEVE+MLKERD AL+ALKEN                                      L+RK+ EKL
Subjt:  TTFHASTKTTPFQAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKEN--------------------------------------LSRKQCEKL

Query:  APKYYGPYKIIEENGKVAYRLLLPPEAIIHN---------------------------------PDTVLGIHWNQELEGNEWLVKWKGLLDNEATWESIF
        AP+YYGPYKIIEE G VAYRL LPPEA IHN                                 P+ VLGI WN+EL  NEWL+KW+GL +++ATWES++
Subjt:  APKYYGPYKIIEENGKVAYRLLLPPEAIIHN---------------------------------PDTVLGIHWNQELEGNEWLVKWKGLLDNEATWESIF

Query:  QMSQQFPNFHLEDKGIIEKEG
        QM+QQFP+FHLEDK  +E  G
Subjt:  QMSQQFPNFHLEDKGIIEKEG

A0A5D3CT96 Ty3/gypsy retrotransposon protein2.0e-9658.26Show/hide
Query:  MRHPFSAKH-AVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYN
        M+HPFSAK  A+ FID  VR+HGIPKSII+D DKIF+SNFWKELF  M TILKRS AFHPQTDGQTERVN+CLETYLR F N +P KW + IPWA+LWYN
Subjt:  MRHPFSAKH-AVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYN

Query:  TTFHASTKTTPFQAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKEN--------------------------------------LSRKQCEKL
        TTFH+ST+TTPFQ VYGRP PPL+SYG K+TPN+EVE +LKERDLA++ALKEN                                      L+RK+ EKL
Subjt:  TTFHASTKTTPFQAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKEN--------------------------------------LSRKQCEKL

Query:  APKYYGPYKIIEENGKVAYRLLLPPEAIIHN---------------------------------PDTVLGIHWNQELEGNEWLVKWKGLLDNEATWESIF
        APKYYGPY+IIE  G+VAYRL LPPEA IHN                                 P+TVLGI W+ EL  NEWLVKWKGL D+EATWES++
Subjt:  APKYYGPYKIIEENGKVAYRLLLPPEAIIHN---------------------------------PDTVLGIHWNQELEGNEWLVKWKGLLDNEATWESIF

Query:  QMSQQFPNFHLEDKGIIEKEG
         M+QQFP+FHLEDK I+E  G
Subjt:  QMSQQFPNFHLEDKGIIEKEG

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein2.6e-1631.31Show/hide
Query:  GIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYNTTFHASTKTTPFQAVYGRPSPP
        G PK II D D IF S  WK+       ++K S+ + PQTDGQTER N+ +E  LR   +  P  W   I   +  YN   H++T+ TPF+ V+ R SP 
Subjt:  GIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYNTTFHASTKTTPFQAVYGRPSPP

Query:  LL-----SYGHKQTPNNEVEI----------------MLKERDLALNALKE-------NLSR------KQCEKLAPKYYGPYKIIEENGKVAYRLLLP
        L      S+  K   N++  I                M K  D+ +  ++E        + R       +  KLAP + GP+ +++++G   Y L LP
Subjt:  LL-----SYGHKQTPNNEVEI----------------MLKERDLALNALKE-------NLSR------KQCEKLAPKYYGPYKIIEENGKVAYRLLLP

P0CT35 Transposon Tf2-2 polyprotein2.6e-1631.31Show/hide
Query:  GIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYNTTFHASTKTTPFQAVYGRPSPP
        G PK II D D IF S  WK+       ++K S+ + PQTDGQTER N+ +E  LR   +  P  W   I   +  YN   H++T+ TPF+ V+ R SP 
Subjt:  GIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYNTTFHASTKTTPFQAVYGRPSPP

Query:  LL-----SYGHKQTPNNEVEI----------------MLKERDLALNALKE-------NLSR------KQCEKLAPKYYGPYKIIEENGKVAYRLLLP
        L      S+  K   N++  I                M K  D+ +  ++E        + R       +  KLAP + GP+ +++++G   Y L LP
Subjt:  LL-----SYGHKQTPNNEVEI----------------MLKERDLALNALKE-------NLSR------KQCEKLAPKYYGPYKIIEENGKVAYRLLLP

P0CT36 Transposon Tf2-3 polyprotein2.6e-1631.31Show/hide
Query:  GIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYNTTFHASTKTTPFQAVYGRPSPP
        G PK II D D IF S  WK+       ++K S+ + PQTDGQTER N+ +E  LR   +  P  W   I   +  YN   H++T+ TPF+ V+ R SP 
Subjt:  GIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYNTTFHASTKTTPFQAVYGRPSPP

Query:  LL-----SYGHKQTPNNEVEI----------------MLKERDLALNALKE-------NLSR------KQCEKLAPKYYGPYKIIEENGKVAYRLLLP
        L      S+  K   N++  I                M K  D+ +  ++E        + R       +  KLAP + GP+ +++++G   Y L LP
Subjt:  LL-----SYGHKQTPNNEVEI----------------MLKERDLALNALKE-------NLSR------KQCEKLAPKYYGPYKIIEENGKVAYRLLLP

P0CT41 Transposon Tf2-12 polyprotein2.6e-1631.31Show/hide
Query:  GIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYNTTFHASTKTTPFQAVYGRPSPP
        G PK II D D IF S  WK+       ++K S+ + PQTDGQTER N+ +E  LR   +  P  W   I   +  YN   H++T+ TPF+ V+ R SP 
Subjt:  GIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYNTTFHASTKTTPFQAVYGRPSPP

Query:  LL-----SYGHKQTPNNEVEI----------------MLKERDLALNALKE-------NLSR------KQCEKLAPKYYGPYKIIEENGKVAYRLLLP
        L      S+  K   N++  I                M K  D+ +  ++E        + R       +  KLAP + GP+ +++++G   Y L LP
Subjt:  LL-----SYGHKQTPNNEVEI----------------MLKERDLALNALKE-------NLSR------KQCEKLAPKYYGPYKIIEENGKVAYRLLLP

Q9UR07 Transposon Tf2-11 polyprotein2.6e-1631.31Show/hide
Query:  GIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYNTTFHASTKTTPFQAVYGRPSPP
        G PK II D D IF S  WK+       ++K S+ + PQTDGQTER N+ +E  LR   +  P  W   I   +  YN   H++T+ TPF+ V+ R SP 
Subjt:  GIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYN-KPKKWDKRIPWAKLWYNTTFHASTKTTPFQAVYGRPSPP

Query:  LL-----SYGHKQTPNNEVEI----------------MLKERDLALNALKE-------NLSR------KQCEKLAPKYYGPYKIIEENGKVAYRLLLP
        L      S+  K   N++  I                M K  D+ +  ++E        + R       +  KLAP + GP+ +++++G   Y L LP
Subjt:  LL-----SYGHKQTPNNEVEI----------------MLKERDLALNALKE-------NLSR------KQCEKLAPKYYGPYKIIEENGKVAYRLLLP

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACATCCGTTTTCGGCTAAGCATGCTGTCATATTCATTGATGGAGACGTAAGGAAGCATGGCATTCCTAAATCCATTATCACGGATGGGGATAAAATTTTCCTTAG
TAACTTCTGGAAAGAATTATTTGCAACAATGGGGACTATTTTGAAAAGGAGTATAGCATTCCATCCACAAACTGATGGGCAGACAGAGAGGGTGAACAGATGCCTTGAAA
CATACTTGAGGCGTTTCTACAACAAACCTAAGAAATGGGATAAACGGATCCCTTGGGCAAAATTGTGGTATAACACCACGTTCCACGCATCCACCAAGACTACACCTTTC
CAGGCTGTTTATGGCAGACCTTCTCCCCCCCTGCTGTCTTATGGTCACAAACAAACTCCTAACAACGAGGTCGAAATCATGTTAAAGGAAAGGGATCTAGCTTTGAATGC
ATTGAAGGAAAATCTCTCTAGGAAACAGTGTGAAAAACTAGCTCCTAAGTACTACGGACCATACAAGATTATAGAAGAGAATGGCAAAGTTGCTTATAGATTGCTGCTCC
CACCTGAAGCAATCATCCATAATCCTGACACTGTGCTAGGAATCCACTGGAATCAAGAGCTGGAAGGTAATGAATGGTTAGTTAAATGGAAGGGGCTGCTAGACAATGAA
GCGACATGGGAATCAATCTTTCAGATGAGCCAGCAGTTTCCTAACTTTCACCTTGAGGACAAGGGAATAATAGAAAAAGAAGGTAAGAGTGGGGATGGGATAGCTAGGTT
TTATGATGAATATCCTTTGAGGGAGAAGCGGTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGACATCCGTTTTCGGCTAAGCATGCTGTCATATTCATTGATGGAGACGTAAGGAAGCATGGCATTCCTAAATCCATTATCACGGATGGGGATAAAATTTTCCTTAG
TAACTTCTGGAAAGAATTATTTGCAACAATGGGGACTATTTTGAAAAGGAGTATAGCATTCCATCCACAAACTGATGGGCAGACAGAGAGGGTGAACAGATGCCTTGAAA
CATACTTGAGGCGTTTCTACAACAAACCTAAGAAATGGGATAAACGGATCCCTTGGGCAAAATTGTGGTATAACACCACGTTCCACGCATCCACCAAGACTACACCTTTC
CAGGCTGTTTATGGCAGACCTTCTCCCCCCCTGCTGTCTTATGGTCACAAACAAACTCCTAACAACGAGGTCGAAATCATGTTAAAGGAAAGGGATCTAGCTTTGAATGC
ATTGAAGGAAAATCTCTCTAGGAAACAGTGTGAAAAACTAGCTCCTAAGTACTACGGACCATACAAGATTATAGAAGAGAATGGCAAAGTTGCTTATAGATTGCTGCTCC
CACCTGAAGCAATCATCCATAATCCTGACACTGTGCTAGGAATCCACTGGAATCAAGAGCTGGAAGGTAATGAATGGTTAGTTAAATGGAAGGGGCTGCTAGACAATGAA
GCGACATGGGAATCAATCTTTCAGATGAGCCAGCAGTTTCCTAACTTTCACCTTGAGGACAAGGGAATAATAGAAAAAGAAGGTAAGAGTGGGGATGGGATAGCTAGGTT
TTATGATGAATATCCTTTGAGGGAGAAGCGGTTGTAA
Protein sequenceShow/hide protein sequence
MRHPFSAKHAVIFIDGDVRKHGIPKSIITDGDKIFLSNFWKELFATMGTILKRSIAFHPQTDGQTERVNRCLETYLRRFYNKPKKWDKRIPWAKLWYNTTFHASTKTTPF
QAVYGRPSPPLLSYGHKQTPNNEVEIMLKERDLALNALKENLSRKQCEKLAPKYYGPYKIIEENGKVAYRLLLPPEAIIHNPDTVLGIHWNQELEGNEWLVKWKGLLDNE
ATWESIFQMSQQFPNFHLEDKGIIEKEGKSGDGIARFYDEYPLREKRL