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CSPI04G12150 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G12150
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionSerine/arginine repetitive matrix protein 1-like
Genome locationChr4:10477553..10477852
RNA-Seq ExpressionCSPI04G12150
SyntenyCSPI04G12150
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037301.1 serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa]3.2e-2584.29Show/hide
Query:  GVDVDVDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQLR
        GV VD+DLKNFPVL+AEF++QF GNGVWR+ LRRMEEKNLKDMNEKWVLLHIEGAELKAR+ ALLKQQL+
Subjt:  GVDVDVDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQLR

KAE8637412.1 hypothetical protein CSA_023389, partial [Cucumis sativus]5.3e-4495.88Show/hide
Query:  MTTGQCETSQPNTRIVDKGVGVDVDVDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQLRTTETNED
        MTTGQCETSQPNTRIVDKGVGVDVDVDLKNFPVLLAE +RQF GNGVWRD LRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQLRTTETNED
Subjt:  MTTGQCETSQPNTRIVDKGVGVDVDVDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQLRTTETNED

KAG6570827.1 hypothetical protein SDJN03_29742, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1870.59Show/hide
Query:  VDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQLRTTE
        VDL +FPVLL+EF+R+F GNGVW++ LR MEEK+L+DMNEKWVLLHIE AELKAR+ ALL++QLR  +
Subjt:  VDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQLRTTE

KAG6606028.1 hypothetical protein SDJN03_03345, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1962.65Show/hide
Query:  RIVDKGVGVDVDVDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQLRTTETNE
        RI  + V     VDLKNFPVL++EF+RQF GNGVWR+ L+ MEE +LK MNEKWVLLHIE AELKAR+ AL+++Q+ TT+T +
Subjt:  RIVDKGVGVDVDVDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQLRTTETNE

KGN46890.1 hypothetical protein Csa_020607 [Cucumis sativus]2.3e-3182.56Show/hide
Query:  RIVDKGVGVDVDVDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQLRTTETNEDVN
        R + +  GV VDVDLKNFPVL+AEF+RQF GNGVWRD LRRM EKNLKDMNEKWVLLHIEGAELKAR+ ALLK+QLRTTETNEDVN
Subjt:  RIVDKGVGVDVDVDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQLRTTETNEDVN

TrEMBL top hitse value%identityAlignment
A0A0A0KAX7 Uncharacterized protein1.1e-3182.56Show/hide
Query:  RIVDKGVGVDVDVDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQLRTTETNEDVN
        R + +  GV VDVDLKNFPVL+AEF+RQF GNGVWRD LRRM EKNLKDMNEKWVLLHIEGAELKAR+ ALLK+QLRTTETNEDVN
Subjt:  RIVDKGVGVDVDVDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQLRTTETNEDVN

A0A0A0LBY9 Uncharacterized protein7.5e-4493.07Show/hide
Query:  MTTGQCETSQPNTRIVDK--GVGVDVDVDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQLRTTETNEDV
        MTTGQCETS+PNTRIVDK  GV VDVDVDLKNFPVLLAEF+RQF GNGVWRD LRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQLRTTETNEDV
Subjt:  MTTGQCETSQPNTRIVDK--GVGVDVDVDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQLRTTETNEDV

Query:  N
        N
Subjt:  N

A0A5A7T6T1 Serine/arginine repetitive matrix protein 1-like1.6e-2584.29Show/hide
Query:  GVDVDVDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQLR
        GV VD+DLKNFPVL+AEF++QF GNGVWR+ LRRMEEKNLKDMNEKWVLLHIEGAELKAR+ ALLKQQL+
Subjt:  GVDVDVDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQLR

A0A6P5ZW34 probable transcription factor At1g617301.9e-0743.06Show/hide
Query:  KGVGVDVDVDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQL
        KG GV    DL  FP L+AEF+R    N VW++ ++ +EE+ LK M+++WVL+ +E A+L A+K  L+++Q+
Subjt:  KGVGVDVDVDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQL

A0A7J8L7Q0 Uncharacterized protein1.9e-0738.27Show/hide
Query:  NTRIVDKG---VGVDVDVDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQL
        N++  D+G   +G D    L  FP L+AEF++    N VW+ +++R+EE+ L+ M+++WV+L +E A+L A+K  L++QQ+
Subjt:  NTRIVDKG---VGVDVDVDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACTGGTCAGTGTGAAACCAGTCAGCCTAATACTCGAATAGTTGACAAAGGGGTGGGGGTTGATGTTGATGTTGATCTGAAGAACTTTCCTGTTCTTCTGGCTGA
ATTTACTCGACAGTTTTCGGGGAATGGGGTGTGGAGAGATGAGCTGAGGAGAATGGAAGAGAAGAATTTGAAGGATATGAATGAGAAATGGGTTTTGTTGCATATTGAAG
GGGCTGAGCTTAAGGCAAGAAAGACTGCTTTATTAAAGCAGCAACTTAGAACTACAGAGACTAATGAAGATGTGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAACTGGTCAGTGTGAAACCAGTCAGCCTAATACTCGAATAGTTGACAAAGGGGTGGGGGTTGATGTTGATGTTGATCTGAAGAACTTTCCTGTTCTTCTGGCTGA
ATTTACTCGACAGTTTTCGGGGAATGGGGTGTGGAGAGATGAGCTGAGGAGAATGGAAGAGAAGAATTTGAAGGATATGAATGAGAAATGGGTTTTGTTGCATATTGAAG
GGGCTGAGCTTAAGGCAAGAAAGACTGCTTTATTAAAGCAGCAACTTAGAACTACAGAGACTAATGAAGATGTGAATTAG
Protein sequenceShow/hide protein sequence
MTTGQCETSQPNTRIVDKGVGVDVDVDLKNFPVLLAEFTRQFSGNGVWRDELRRMEEKNLKDMNEKWVLLHIEGAELKARKTALLKQQLRTTETNEDVN