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CSPI04G12170 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G12170
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNDR1/HIN1-like protein 12
Genome locationChr4:10514818..10515607
RNA-Seq ExpressionCSPI04G12170
SyntenyCSPI04G12170
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006898 - receptor-mediated endocytosis (biological process)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030124 - AP-4 adaptor complex (cellular component)
GO:0140312 - cargo adaptor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052257.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa]2.2e-10595.02Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF
        MPPNFLSSLKRHTHPLIWIAGIICATIALAVI+AGIVIFIGYVTIRPRVPSISVTDGHL+RIRSSRTGLLEVQMKIVVRAENQNAKAHA FSKTDFVLLF
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF

Query:  DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ
        DGIEIASLVAHRPFKVNKM+YLDLHFLVESSAIPLDSTQMQHLSWSLKR+LIQFDLKGSSRTRWRVG+LGPLKFWCRL+CHLRF PRNGSYIP PCSS Q
Subjt:  DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ

Query:  K
        K
Subjt:  K

KGN53998.2 hypothetical protein Csa_011831 [Cucumis sativus]2.3e-110100Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF
        MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF

Query:  DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ
        DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ
Subjt:  DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ

Query:  K
        K
Subjt:  K

XP_022135525.1 uncharacterized protein LOC111007456 [Momordica charantia]8.1e-10090.55Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF
        MPP FLSSLKRHTHPLIWIAGIICATIALAVII GIVIFIGYVTIRPRVPSISVTDGHL+RIRSSRTGLLEVQMKIVVRAENQNAKAHA FS+TDFVL+F
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF

Query:  DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ
        DGIEIASLVA RPFKV+KM+YLDLHFLVESSAIPL+ TQM HLSWSLKR+L+QFDLKGSSRTRWRVGVLGPLKFWCRL+CHLRF PRNGSY+P PCSSK 
Subjt:  DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ

Query:  K
        K
Subjt:  K

XP_022940744.1 uncharacterized protein LOC111446247 [Cucurbita moschata]1.5e-10191.04Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF
        MPPNFLSSLKRHTHPLIWIAGIICA IALAVIIAGIVIFIGYVTIRPRVP+ISVTDGHL+RIRSSRTGLLEVQMKIVVRAENQNA+AHA FS TDFVL+F
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF

Query:  DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ
        DGIEIASLVAHRPFKVNKM+YLDLHFLVESSAIPL+ TQMQHL WSLKR+L+QFDLKGSSRTRWRVGVLGPLKFWCRL+CHLRF+PRNGSYIP PCSS+ 
Subjt:  DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ

Query:  K
        K
Subjt:  K

XP_038896622.1 uncharacterized protein LOC120084885 [Benincasa hispida]3.2e-10493.03Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF
        MPPNFLSS+KRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHL+RIRSSRTGLLEVQMKIVVRAENQNA+AHA FS+TDFVLLF
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF

Query:  DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ
        DGIEIASLVAHRPFKVNKM+YLDLHFLVESSAIPL+ TQMQHLSWSLKRDL+QFDLKGSSRTRWRVG+LGPLKFWCRL+CHLRF+PRNGSYIP PCSS+Q
Subjt:  DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ

Query:  K
        K
Subjt:  K

TrEMBL top hitse value%identityAlignment
A0A0A0L1I9 Uncharacterized protein1.1e-110100Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF
        MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF

Query:  DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ
        DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ
Subjt:  DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ

Query:  K
        K
Subjt:  K

A0A5D3BSN8 NDR1/HIN1-like protein 121.1e-10595.02Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF
        MPPNFLSSLKRHTHPLIWIAGIICATIALAVI+AGIVIFIGYVTIRPRVPSISVTDGHL+RIRSSRTGLLEVQMKIVVRAENQNAKAHA FSKTDFVLLF
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF

Query:  DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ
        DGIEIASLVAHRPFKVNKM+YLDLHFLVESSAIPLDSTQMQHLSWSLKR+LIQFDLKGSSRTRWRVG+LGPLKFWCRL+CHLRF PRNGSYIP PCSS Q
Subjt:  DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ

Query:  K
        K
Subjt:  K

A0A6J1C199 uncharacterized protein LOC1110074563.9e-10090.55Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF
        MPP FLSSLKRHTHPLIWIAGIICATIALAVII GIVIFIGYVTIRPRVPSISVTDGHL+RIRSSRTGLLEVQMKIVVRAENQNAKAHA FS+TDFVL+F
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF

Query:  DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ
        DGIEIASLVA RPFKV+KM+YLDLHFLVESSAIPL+ TQM HLSWSLKR+L+QFDLKGSSRTRWRVGVLGPLKFWCRL+CHLRF PRNGSY+P PCSSK 
Subjt:  DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ

Query:  K
        K
Subjt:  K

A0A6J1FEV3 uncharacterized protein LOC1114434378.2e-9888.56Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF
        MPPNFLSSLKRHTHPLIWIAGIICATIA+AVIIAGIVIFIGYVTIRP VPSISVTDGHL+RIR+SR GLLEVQMKIVVRAENQNA+A A FS TDFVL+F
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF

Query:  DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ
        DGIEIASLVAHRPFKVNKM+YLDLHFLVESSAIPL+  QMQHLSWSL R+L+QFDLKGSSRTRWRVGVLGPLKFWC L+C LRF+PRNGSYIP PCSSK 
Subjt:  DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ

Query:  K
        K
Subjt:  K

A0A6J1FL61 uncharacterized protein LOC1114462477.1e-10291.04Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF
        MPPNFLSSLKRHTHPLIWIAGIICA IALAVIIAGIVIFIGYVTIRPRVP+ISVTDGHL+RIRSSRTGLLEVQMKIVVRAENQNA+AHA FS TDFVL+F
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLF

Query:  DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ
        DGIEIASLVAHRPFKVNKM+YLDLHFLVESSAIPL+ TQMQHL WSLKR+L+QFDLKGSSRTRWRVGVLGPLKFWCRL+CHLRF+PRNGSYIP PCSS+ 
Subjt:  DGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQ

Query:  K
        K
Subjt:  K

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13050.1 unknown protein3.4e-1125.52Show/hide
Query:  RHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVA
        + T P+   A I CA + + +I++G+++ + Y+  RPR P   ++   L         +L   + +VV   N + K+   FS   F L F    IA+   
Subjt:  RHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVA

Query:  H-RPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRF-FPRNGSYIPTPCSSKQ
        H  PF V K   +   F + SS + +   Q Q L   L    +  +L+G+   R  +G L    +W    C +    P  G+     C++K+
Subjt:  H-RPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRF-FPRNGSYIPTPCSSKQ

AT1G13050.2 unknown protein3.7e-1025.68Show/hide
Query:  AGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAH-RPFKVNK
        A I CA + + +I++G+++ + Y+  RPR P   ++   L         +L   + +VV   N + K+   FS   F L F    IA+   H  PF V K
Subjt:  AGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAH-RPFKVNK

Query:  MNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRF-FPRNGSYIPTPCSSKQ
           +   F + SS + +   Q Q L   L    +  +L+G+   R  +G L    +W    C +    P  G+     C++K+
Subjt:  MNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRF-FPRNGSYIPTPCSSKQ

AT5G45320.1 FUNCTIONS IN: molecular_function unknown5.7e-5152.08Show/hide
Query:  RH-THPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLV
        RH T P IW A IICA I++ VI+ GI++F+GY+ I PRVP ISV D HL+ ++    G+L+ Q+ IV+R EN NAKAHA F +T+F L ++G  IA L 
Subjt:  RH-THPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLV

Query:  AHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQK
        A   F+V K   + L +LV+S  IPL+ T MQ + +++K+D+I F+LKG SRTRWRVG LG +KF C L C LRF P + SYIP+PC+S  K
Subjt:  AHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACCAAATTTCCTATCCAGTCTAAAGCGACATACTCATCCTCTAATTTGGATCGCCGGCATAATCTGCGCCACCATAGCTCTTGCAGTAATCATAGCAGGCATCGT
CATCTTCATCGGCTATGTTACGATCCGCCCTAGGGTACCGTCAATCAGTGTAACCGACGGTCATCTTGAAAGAATCCGAAGCAGTAGAACCGGATTGCTTGAAGTCCAAA
TGAAGATCGTCGTCCGAGCCGAGAATCAAAATGCTAAAGCACACGCAGGCTTTTCAAAGACGGATTTTGTCCTACTTTTCGACGGAATAGAAATCGCATCACTAGTAGCT
CATCGGCCGTTCAAAGTGAACAAAATGAATTACCTGGATTTGCATTTCTTGGTGGAATCATCGGCAATTCCGCTGGATTCAACACAGATGCAGCATCTTAGCTGGTCGCT
GAAGAGAGATTTGATACAATTCGATCTGAAAGGAAGCTCGAGAACTCGATGGCGAGTTGGAGTTTTGGGACCGCTCAAGTTCTGGTGCCGATTGGATTGTCACCTCAGGT
TTTTCCCGCGCAATGGAAGCTATATCCCCACGCCTTGTTCTTCAAAGCAAAAATAA
mRNA sequenceShow/hide mRNA sequence
TGCAACTTTTTGATAATCGTGCATTCCTTCCTCAGTGTTTCTCCCTAAAATTGAGCTCTGCAACACAACAAAAGTGGTGAAGAGTGAGATTAGCTGCCAATCCAGATATA
CCCGTACTTCTTTTTTTCACTCACTATTGTCATTAGTTTATGAGAAATTGCATCGATCTCAAATGCCACCAAATTTCCTATCCAGTCTAAAGCGACATACTCATCCTCTA
ATTTGGATCGCCGGCATAATCTGCGCCACCATAGCTCTTGCAGTAATCATAGCAGGCATCGTCATCTTCATCGGCTATGTTACGATCCGCCCTAGGGTACCGTCAATCAG
TGTAACCGACGGTCATCTTGAAAGAATCCGAAGCAGTAGAACCGGATTGCTTGAAGTCCAAATGAAGATCGTCGTCCGAGCCGAGAATCAAAATGCTAAAGCACACGCAG
GCTTTTCAAAGACGGATTTTGTCCTACTTTTCGACGGAATAGAAATCGCATCACTAGTAGCTCATCGGCCGTTCAAAGTGAACAAAATGAATTACCTGGATTTGCATTTC
TTGGTGGAATCATCGGCAATTCCGCTGGATTCAACACAGATGCAGCATCTTAGCTGGTCGCTGAAGAGAGATTTGATACAATTCGATCTGAAAGGAAGCTCGAGAACTCG
ATGGCGAGTTGGAGTTTTGGGACCGCTCAAGTTCTGGTGCCGATTGGATTGTCACCTCAGGTTTTTCCCGCGCAATGGAAGCTATATCCCCACGCCTTGTTCTTCAAAGC
AAAAATAATTCCTTAGCACA
Protein sequenceShow/hide protein sequence
MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVA
HRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQK