; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G12220 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G12220
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionReverse transcriptase
Genome locationChr4:10540956..10542079
RNA-Seq ExpressionCSPI04G12220
SyntenyCSPI04G12220
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]5.9e-17585.34Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT
        MRDDVMQYTKTCLICQQDKVEK KVAGLL+PLPVPTR WESVS+DFITHLPKV D+E ILVIIDRFSKYATF+P TKQC AE TAQLFF+H+VKLWGVPT
Subjt:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT

Query:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV
        SIVSDRDGRFIG+FWTELF+FLGTSLN+SSSYHPQTDGQTERFN ML+EYL HFV  RQ+NW QLLDVAQFCFNAQTSSSTG+SPFEI+ GR PVLPHLV
Subjt:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV

Query:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTW
        DHP+AGKNPQA NFT+EW+QT DIARA LEKASKRMKKWADKKRRPLEFRAGDQVLIKLR  Q++FRG KDQRLVRKYEGPVEVLKKVGNTSY+VA+PTW
Subjt:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTW

Query:  MKIHPVIHVSNLKPYYQDPDGMQRNIIVRPTIDLSQKESKEVEEILAE
        MKI+PVIHVSNLKPY+QD + +QRN++ RPTIDLSQKE K+VEEILAE
Subjt:  MKIHPVIHVSNLKPYYQDPDGMQRNIIVRPTIDLSQKESKEVEEILAE

KAA0053339.1 reverse transcriptase [Cucumis melo var. makuwa]5.9e-17585.34Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT
        MRDDVMQYTKTCLICQQDKVEK KVAGLL+PLPVPTR WESVS+DFITHLPKV D+E ILVIIDRFSKYATF+P TKQC AE TAQLFF+H+VKLWGVPT
Subjt:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT

Query:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV
        SIVSDRDGRFIG+FWTELF+FLGTSLN+SSSYHPQTDGQTERFN ML+EYL HFV  RQ+NW QLLDVAQFCFNAQTSSSTG+SPFEI+ GR PVLPHLV
Subjt:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV

Query:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTW
        DHP+AGKNPQA NFT+EW+QT DIARA LEKASKRMKKWADKKRRPLEFRAGDQVLIKLR  Q++FRG KDQRLVRKYEGPVEVLKKVGNTSY+VA+PTW
Subjt:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTW

Query:  MKIHPVIHVSNLKPYYQDPDGMQRNIIVRPTIDLSQKESKEVEEILAE
        MKI+PVIHVSNLKPY+QD + +QRN++ RPTIDLSQKE K+VEEILAE
Subjt:  MKIHPVIHVSNLKPYYQDPDGMQRNIIVRPTIDLSQKESKEVEEILAE

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]5.9e-17585.34Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT
        MRDDVMQYTKTCLICQQDKVEK KVAGLL+PLPVPTR WESVS+DFITHLPKV D+E ILVIIDRFSKYATF+P TKQC AE TAQLFF+H+VKLWGVPT
Subjt:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT

Query:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV
        SIVSDRDGRFIG+FWTELF+FLGTSLN+SSSYHPQTDGQTERFN ML+EYL HFV  RQ+NW QLLDVAQFCFNAQTSSSTG+SPFEI+ GR PVLPHLV
Subjt:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV

Query:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTW
        DHP+AGKNPQA NFT+EW+QT DIARA LEKASKRMKKWADKKRRPLEFRAGDQVLIKLR  Q++FRG KDQRLVRKYEGPVEVLKKVGNTSY+VA+PTW
Subjt:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTW

Query:  MKIHPVIHVSNLKPYYQDPDGMQRNIIVRPTIDLSQKESKEVEEILAE
        MKI+PVIHVSNLKPY+QD + +QRN++ RPTIDLSQKE K+VEEILAE
Subjt:  MKIHPVIHVSNLKPYYQDPDGMQRNIIVRPTIDLSQKESKEVEEILAE

TYK01597.1 reverse transcriptase [Cucumis melo var. makuwa]4.5e-17585.34Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT
        MRDDVMQYTKTCLICQQDKVEK KVAGLL+PLPVPTR WESVS+DFITHLPKV D+E ILVIIDRFSKYATF+PTTKQC AE+TAQLFF+H+VKLWGVPT
Subjt:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT

Query:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV
        SIVSDRDGRFIG+FWTELF+FLGTSLN+SSSYHPQTDGQTERFNCML+EYL HFV  RQ+NW QLLDVAQFCFNAQTSSSTG+SPFEI+ GR PVLPHLV
Subjt:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV

Query:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTW
        DHP+AGKNPQA NFT+EWKQT DIARA LEKASKRMKKWADKKRRPLEFRAGDQVLIKLR  Q++FRG KDQRLVRKYEGPV+VLKKVGNTSY+V +PTW
Subjt:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTW

Query:  MKIHPVIHVSNLKPYYQDPDGMQRNIIVRPTIDLSQKESKEVEEILAE
        MKI+PVIHVSNLK Y+QD + +QRNI+ RP IDLSQKE K+VEEILAE
Subjt:  MKIHPVIHVSNLKPYYQDPDGMQRNIIVRPTIDLSQKESKEVEEILAE

TYK28713.1 reverse transcriptase [Cucumis melo var. makuwa]5.9e-17585.34Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT
        MRDDVMQYTKTCLICQQDKVEK KVAGLL+PLPVPTR WESVS+DFITHLPKV D+E ILVIIDRFSKYATF+P TKQC AE TAQLFF+H+VKLWGVPT
Subjt:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT

Query:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV
        SIVSDRDGRFIG+FWTELF+FLGTSLN+SSSYHPQTDGQTERFN ML+EYL HFV  RQ+NW QLLDVAQFCFNAQTSSSTG+SPFEI+ GR PVLPHLV
Subjt:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV

Query:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTW
        DHP+AGKNPQA NFT+EW+QT DIARA LEKASKRMKKWADKKRRPLEFRAGDQVLIKLR  Q++FRG KDQRLVRKYEGPVEVLKKVGNTSY+VA+PTW
Subjt:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTW

Query:  MKIHPVIHVSNLKPYYQDPDGMQRNIIVRPTIDLSQKESKEVEEILAE
        MKI+PVIHVSNLKPY+QD + +QRN++ RPTIDLSQKE K+VEEILAE
Subjt:  MKIHPVIHVSNLKPYYQDPDGMQRNIIVRPTIDLSQKESKEVEEILAE

TrEMBL top hitse value%identityAlignment
A0A5A7UXR6 Reverse transcriptase2.9e-17585.34Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT
        MRDDVMQYTKTCLICQQDKVEK KVAGLL+PLPVPTR WESVS+DFITHLPKV D+E ILVIIDRFSKYATF+P TKQC AE TAQLFF+H+VKLWGVPT
Subjt:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT

Query:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV
        SIVSDRDGRFIG+FWTELF+FLGTSLN+SSSYHPQTDGQTERFN ML+EYL HFV  RQ+NW QLLDVAQFCFNAQTSSSTG+SPFEI+ GR PVLPHLV
Subjt:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV

Query:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTW
        DHP+AGKNPQA NFT+EW+QT DIARA LEKASKRMKKWADKKRRPLEFRAGDQVLIKLR  Q++FRG KDQRLVRKYEGPVEVLKKVGNTSY+VA+PTW
Subjt:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTW

Query:  MKIHPVIHVSNLKPYYQDPDGMQRNIIVRPTIDLSQKESKEVEEILAE
        MKI+PVIHVSNLKPY+QD + +QRN++ RPTIDLSQKE K+VEEILAE
Subjt:  MKIHPVIHVSNLKPYYQDPDGMQRNIIVRPTIDLSQKESKEVEEILAE

A0A5D3B7E7 Reverse transcriptase2.9e-17585.34Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT
        MRDDVMQYTKTCLICQQDKVEK KVAGLL+PLPVPTR WESVS+DFITHLPKV D+E ILVIIDRFSKYATF+P TKQC AE TAQLFF+H+VKLWGVPT
Subjt:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT

Query:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV
        SIVSDRDGRFIG+FWTELF+FLGTSLN+SSSYHPQTDGQTERFN ML+EYL HFV  RQ+NW QLLDVAQFCFNAQTSSSTG+SPFEI+ GR PVLPHLV
Subjt:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV

Query:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTW
        DHP+AGKNPQA NFT+EW+QT DIARA LEKASKRMKKWADKKRRPLEFRAGDQVLIKLR  Q++FRG KDQRLVRKYEGPVEVLKKVGNTSY+VA+PTW
Subjt:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTW

Query:  MKIHPVIHVSNLKPYYQDPDGMQRNIIVRPTIDLSQKESKEVEEILAE
        MKI+PVIHVSNLKPY+QD + +QRN++ RPTIDLSQKE K+VEEILAE
Subjt:  MKIHPVIHVSNLKPYYQDPDGMQRNIIVRPTIDLSQKESKEVEEILAE

A0A5D3BQE4 Reverse transcriptase2.2e-17585.34Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT
        MRDDVMQYTKTCLICQQDKVEK KVAGLL+PLPVPTR WESVS+DFITHLPKV D+E ILVIIDRFSKYATF+PTTKQC AE+TAQLFF+H+VKLWGVPT
Subjt:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT

Query:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV
        SIVSDRDGRFIG+FWTELF+FLGTSLN+SSSYHPQTDGQTERFNCML+EYL HFV  RQ+NW QLLDVAQFCFNAQTSSSTG+SPFEI+ GR PVLPHLV
Subjt:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV

Query:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTW
        DHP+AGKNPQA NFT+EWKQT DIARA LEKASKRMKKWADKKRRPLEFRAGDQVLIKLR  Q++FRG KDQRLVRKYEGPV+VLKKVGNTSY+V +PTW
Subjt:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTW

Query:  MKIHPVIHVSNLKPYYQDPDGMQRNIIVRPTIDLSQKESKEVEEILAE
        MKI+PVIHVSNLK Y+QD + +QRNI+ RP IDLSQKE K+VEEILAE
Subjt:  MKIHPVIHVSNLKPYYQDPDGMQRNIIVRPTIDLSQKESKEVEEILAE

A0A5D3BYE6 Reverse transcriptase2.9e-17585.34Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT
        MRDDVMQYTKTCLICQQDKVEK KVAGLL+PLPVPTR WESVS+DFITHLPKV D+E ILVIIDRFSKYATF+P TKQC AE TAQLFF+H+VKLWGVPT
Subjt:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT

Query:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV
        SIVSDRDGRFIG+FWTELF+FLGTSLN+SSSYHPQTDGQTERFN ML+EYL HFV  RQ+NW QLLDVAQFCFNAQTSSSTG+SPFEI+ GR PVLPHLV
Subjt:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV

Query:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTW
        DHP+AGKNPQA NFT+EW+QT DIARA LEKASKRMKKWADKKRRPLEFRAGDQVLIKLR  Q++FRG KDQRLVRKYEGPVEVLKKVGNTSY+VA+PTW
Subjt:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTW

Query:  MKIHPVIHVSNLKPYYQDPDGMQRNIIVRPTIDLSQKESKEVEEILAE
        MKI+PVIHVSNLKPY+QD + +QRN++ RPTIDLSQKE K+VEEILAE
Subjt:  MKIHPVIHVSNLKPYYQDPDGMQRNIIVRPTIDLSQKESKEVEEILAE

A0A5D3C4R1 Reverse transcriptase2.9e-17585.34Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT
        MRDDVMQYTKTCLICQQDKVEK KVAGLL+PLPVPTR WESVS+DFITHLPKV D+E ILVIIDRFSKYATF+P TKQC AE TAQLFF+H+VKLWGVPT
Subjt:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT

Query:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV
        SIVSDRDGRFIG+FWTELF+FLGTSLN+SSSYHPQTDGQTERFN ML+EYL HFV  RQ+NW QLLDVAQFCFNAQTSSSTG+SPFEI+ GR PVLPHLV
Subjt:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV

Query:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTW
        DHP+AGKNPQA NFT+EW+QT DIARA LEKASKRMKKWADKKRRPLEFRAGDQVLIKLR  Q++FRG KDQRLVRKYEGPVEVLKKVGNTSY+VA+PTW
Subjt:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTW

Query:  MKIHPVIHVSNLKPYYQDPDGMQRNIIVRPTIDLSQKESKEVEEILAE
        MKI+PVIHVSNLKPY+QD + +QRN++ RPTIDLSQKE K+VEEILAE
Subjt:  MKIHPVIHVSNLKPYYQDPDGMQRNIIVRPTIDLSQKESKEVEEILAE

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein9.6e-4333.23Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT
        +R  + +Y + C  CQ +K    K  G L+P+P   R WES+S+DFIT LP+ S Y  + V++DRFSK A  VP TK   AE TA++F + ++  +G P 
Subjt:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT

Query:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV
         I++D D  F    W +        +  S  Y PQTDGQTER N  +++ L    +T    W   + + Q  +N    S+T  +PFEI+    P L  L 
Subjt:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV

Query:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPL-EFRAGDQVLIK-LRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVP
           ++ K  +    ++E  Q     +  L   + +MKK+ D K + + EF+ GD V++K  ++G +    HK  +L   + GP  VL+K G  +Y++ +P
Subjt:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPL-EFRAGDQVLIK-LRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVP

Query:  TWMK--IHPVIHVSNLKPY
          +K       HVS+L+ Y
Subjt:  TWMK--IHPVIHVSNLKPY

P0CT41 Transposon Tf2-12 polyprotein9.6e-4333.23Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT
        +R  + +Y + C  CQ +K    K  G L+P+P   R WES+S+DFIT LP+ S Y  + V++DRFSK A  VP TK   AE TA++F + ++  +G P 
Subjt:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT

Query:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV
         I++D D  F    W +        +  S  Y PQTDGQTER N  +++ L    +T    W   + + Q  +N    S+T  +PFEI+    P L  L 
Subjt:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV

Query:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPL-EFRAGDQVLIK-LRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVP
           ++ K  +    ++E  Q     +  L   + +MKK+ D K + + EF+ GD V++K  ++G +    HK  +L   + GP  VL+K G  +Y++ +P
Subjt:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPL-EFRAGDQVLIK-LRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVP

Query:  TWMK--IHPVIHVSNLKPY
          +K       HVS+L+ Y
Subjt:  TWMK--IHPVIHVSNLKPY

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein3.5e-4534.97Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVS-DYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVP
        ++  ++QY +TC+ CQ  K  + ++ GLL+PLP+    W  +S+DF+T LP  S +   ILV++DRFSK A F+ T K   A     L FR+I    G P
Subjt:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVS-DYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVP

Query:  TSIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHL
         +I SDRD R     + EL   LG    +SS+ HPQTDGQ+ER    L   L  +V+T  +NW   L   +F +N+  + + GKSPFEI  G LP  P +
Subjt:  TSIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHL

Query:  -VDHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVP
          D     ++  A    +  K  T   +  LE A   M+   +++R+PL    GD VL+        F+     ++ + Y GP  V+KK+ + +Y++ + 
Subjt:  -VDHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVP

Query:  TWMKIHPVIHVSNLKPYYQDPDGMQR
        +  K H VI+V  LK  Y      QR
Subjt:  TWMKIHPVIHVSNLKPYYQDPDGMQR

Q99315 Transposon Ty3-G Gag-Pol polyprotein5.4e-4634.56Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVS-DYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVP
        ++  ++QY +TC+ CQ  K  + ++ GLL+PLP+    W  +S+DF+T LP  S +   ILV++DRFSK A F+ T K   A     L FR+I    G P
Subjt:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVS-DYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVP

Query:  TSIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHL
         +I SDRD R     + EL   LG    +SS+ HPQTDGQ+ER    L   L  + +T  +NW   L   +F +N+  + + GKSPFEI  G LP  P +
Subjt:  TSIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHL

Query:  -VDHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVP
          D     ++  A    +  K  T   +  LE A   M+   +++R+PL    GD VL+        F+     ++ + Y GP  V+KK+ + +Y++ + 
Subjt:  -VDHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVP

Query:  TWMKIHPVIHVSNLKPYYQDPDGMQRN
        +  K H VI+V  LK +   PD   +N
Subjt:  TWMKIHPVIHVSNLKPYYQDPDGMQRN

Q9UR07 Transposon Tf2-11 polyprotein9.6e-4333.23Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT
        +R  + +Y + C  CQ +K    K  G L+P+P   R WES+S+DFIT LP+ S Y  + V++DRFSK A  VP TK   AE TA++F + ++  +G P 
Subjt:  MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPT

Query:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV
         I++D D  F    W +        +  S  Y PQTDGQTER N  +++ L    +T    W   + + Q  +N    S+T  +PFEI+    P L  L 
Subjt:  SIVSDRDGRFIGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLV

Query:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPL-EFRAGDQVLIK-LRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVP
           ++ K  +    ++E  Q     +  L   + +MKK+ D K + + EF+ GD V++K  ++G +    HK  +L   + GP  VL+K G  +Y++ +P
Subjt:  DHPYAGKNPQAHNFTREWKQTTDIARASLEKASKRMKKWADKKRRPL-EFRAGDQVLIK-LRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVP

Query:  TWMK--IHPVIHVSNLKPY
          +K       HVS+L+ Y
Subjt:  TWMK--IHPVIHVSNLKPY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGACGACGTCATGCAATACACGAAGACGTGTCTCATTTGTCAACAGGACAAAGTCGAGAAGGCAAAGGTTGCTGGGCTTCTCGAACCTCTGCCAGTGCCAACGAG
ACTGTGGGAGAGTGTTTCTATAGACTTCATCACCCATCTCCCAAAAGTAAGCGACTATGAGACTATATTAGTCATCATAGATCGATTCTCGAAATATGCCACTTTCGTTC
CCACTACGAAGCAGTGTTTGGCGGAGTTGACAGCTCAATTATTCTTTCGACATATTGTGAAGTTGTGGGGTGTACCGACAAGCATTGTGAGTGATCGAGATGGACGGTTC
ATTGGCACCTTTTGGACAGAATTATTCACTTTCTTAGGGACAAGCCTGAATGTGTCCTCAAGTTACCATCCCCAGACGGACGGTCAGACTGAGCGGTTCAATTGTATGCT
CAAAGAATACTTGCACCATTTTGTTACTACAAGGCAAAGAAATTGGGCTCAATTGCTGGATGTCGCCCAATTCTGTTTTAACGCTCAGACAAGCTCGTCAACTGGAAAGA
GCCCTTTTGAAATTATTTGCGGAAGGCTACCAGTTCTGCCACACCTTGTTGATCACCCCTATGCGGGAAAGAACCCTCAAGCTCACAACTTTACCAGAGAATGGAAGCAG
ACGACAGACATCGCTCGAGCCTCTTTAGAGAAAGCCTCGAAGCGGATGAAGAAGTGGGCAGACAAGAAGCGCCGCCCTCTGGAGTTTCGAGCCGGAGATCAGGTTCTCAT
TAAGTTACGATCAGGACAGATTCAGTTTCGAGGACACAAAGACCAACGCCTCGTAAGAAAGTACGAGGGACCAGTGGAAGTGCTGAAGAAGGTAGGGAACACATCTTATA
AAGTAGCGGTGCCCACATGGATGAAAATCCACCCAGTAATTCATGTGAGTAATTTGAAGCCTTACTACCAAGATCCTGATGGCATGCAACGTAATATCATAGTCCGACCG
ACCATCGACCTCAGCCAGAAGGAGAGTAAAGAAGTTGAAGAAATCCTGGCCGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACACTCTGTGCGCCGACCACCCCGGATGGCAGAGGACATACGCCTTGCTGAAGAAGTGATACTTTTGGCCTAATATGAGAGACGACGTCATGCAATACACGAAGACG
TGTCTCATTTGTCAACAGGACAAAGTCGAGAAGGCAAAGGTTGCTGGGCTTCTCGAACCTCTGCCAGTGCCAACGAGACTGTGGGAGAGTGTTTCTATAGACTTCATCAC
CCATCTCCCAAAAGTAAGCGACTATGAGACTATATTAGTCATCATAGATCGATTCTCGAAATATGCCACTTTCGTTCCCACTACGAAGCAGTGTTTGGCGGAGTTGACAG
CTCAATTATTCTTTCGACATATTGTGAAGTTGTGGGGTGTACCGACAAGCATTGTGAGTGATCGAGATGGACGGTTCATTGGCACCTTTTGGACAGAATTATTCACTTTC
TTAGGGACAAGCCTGAATGTGTCCTCAAGTTACCATCCCCAGACGGACGGTCAGACTGAGCGGTTCAATTGTATGCTCAAAGAATACTTGCACCATTTTGTTACTACAAG
GCAAAGAAATTGGGCTCAATTGCTGGATGTCGCCCAATTCTGTTTTAACGCTCAGACAAGCTCGTCAACTGGAAAGAGCCCTTTTGAAATTATTTGCGGAAGGCTACCAG
TTCTGCCACACCTTGTTGATCACCCCTATGCGGGAAAGAACCCTCAAGCTCACAACTTTACCAGAGAATGGAAGCAGACGACAGACATCGCTCGAGCCTCTTTAGAGAAA
GCCTCGAAGCGGATGAAGAAGTGGGCAGACAAGAAGCGCCGCCCTCTGGAGTTTCGAGCCGGAGATCAGGTTCTCATTAAGTTACGATCAGGACAGATTCAGTTTCGAGG
ACACAAAGACCAACGCCTCGTAAGAAAGTACGAGGGACCAGTGGAAGTGCTGAAGAAGGTAGGGAACACATCTTATAAAGTAGCGGTGCCCACATGGATGAAAATCCACC
CAGTAATTCATGTGAGTAATTTGAAGCCTTACTACCAAGATCCTGATGGCATGCAACGTAATATCATAGTCCGACCGACCATCGACCTCAGCCAGAAGGAGAGTAAAGAA
GTTGAAGAAATCCTGGCCGAATGA
Protein sequenceShow/hide protein sequence
MRDDVMQYTKTCLICQQDKVEKAKVAGLLEPLPVPTRLWESVSIDFITHLPKVSDYETILVIIDRFSKYATFVPTTKQCLAELTAQLFFRHIVKLWGVPTSIVSDRDGRF
IGTFWTELFTFLGTSLNVSSSYHPQTDGQTERFNCMLKEYLHHFVTTRQRNWAQLLDVAQFCFNAQTSSSTGKSPFEIICGRLPVLPHLVDHPYAGKNPQAHNFTREWKQ
TTDIARASLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRSGQIQFRGHKDQRLVRKYEGPVEVLKKVGNTSYKVAVPTWMKIHPVIHVSNLKPYYQDPDGMQRNIIVRP
TIDLSQKESKEVEEILAE