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CSPI04G12230 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G12230
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprecursor of CEP12
Genome locationChr4:10570496..10570771
RNA-Seq ExpressionCSPI04G12230
SyntenyCSPI04G12230
Gene Ontology termsGO:0048364 - root development (biological process)
GO:0050793 - regulation of developmental process (biological process)
InterPro domainsIPR033250 - C-terminally encoded peptide


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC31035.1 hypothetical protein L484_021337 [Morus notabilis]9.3e-1155.84Show/hide
Query:  LLLLLLLHSL-FVTSSRPLHGIHP-----HNPHAITPPAPVSLETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPP
        + +LLLLHS+ F +SSRPLH +HP       P   + P P S +  FS+N YK  ETDAFRPT+PGHSPGVGH  PP
Subjt:  LLLLLLLHSL-FVTSSRPLHGIHP-----HNPHAITPPAPVSLETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPP

KAF8033451.1 hypothetical protein BT93_D2151 [Corymbia citriodora subsp. variegata]3.9e-0949.48Show/hide
Query:  MAHRSLHLNSFFPLVALLLLLLLLHSLF--VTSSRPLHGIHP----HNPHAITPPAPVSLETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPPGKP
        MA ++    S+F     LL+LLLLH       +SRPL   HP         +  P P S+  +  INRYK  ET+AFRPTSPGHSPGVGHNEPPG P
Subjt:  MAHRSLHLNSFFPLVALLLLLLLLHSLF--VTSSRPLHGIHP----HNPHAITPPAPVSLETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPPGKP

KAG6591857.1 Precursor of CEP4, partial [Cucurbita argyrosperma subsp. sororia]7.1e-1961Show/hide
Query:  AHRSLHLNSFFPLVALLLLLLLLHSLFVTSSRPLHGIHP-----------HNPHAITPPAPVSLETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPPGK
        A RSLH  +  PL+      LLLHSL VT SRPLHGI P            + HAI PPAPVS   +FSINRYKYVETDAFRPT+PGHSPGVGH +PPG+
Subjt:  AHRSLHLNSFFPLVALLLLLLLLHSLFVTSSRPLHGIHP-----------HNPHAITPPAPVSLETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPPGK

KAG6608019.1 Precursor of CEP4, partial [Cucurbita argyrosperma subsp. sororia]4.5e-1357.29Show/hide
Query:  MAHRSLHLNSFFPLVALLLLLLLLHSLFVTSSRPLHGIHP-------HNPHAITPPAPVSLETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPPG
        M  RS HL        L L++ LL+ L VT SRP H I+         N HAITPPA +S   +FSINRYKYVE DAFRPTSPGHSPGVGH +PPG
Subjt:  MAHRSLHLNSFFPLVALLLLLLLLHSLFVTSSRPLHGIHP-------HNPHAITPPAPVSLETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPPG

KAG6778416.1 hypothetical protein POTOM_018280 [Populus tomentosa]5.1e-0949.4Show/hide
Query:  FPLVALLLLLLLLHSLF--VTSSRPLHGIHPHNPHAITPPAPVSL-ETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPPGKP
        F L    ++LLLLH  F    +SRPLH   P  P + + P P  + +  + INRYK +E+DAFRPT+PGHSPGVGH  PP  P
Subjt:  FPLVALLLLLLLLHSLF--VTSSRPLHGIHPHNPHAITPPAPVSL-ETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPPGKP

TrEMBL top hitse value%identityAlignment
A0A0A0KWX0 Uncharacterized protein6.9e-44100Show/hide
Query:  MAHRSLHLNSFFPLVALLLLLLLLHSLFVTSSRPLHGIHPHNPHAITPPAPVSLETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPPGKP
        MAHRSLHLNSFFPLVALLLLLLLLHSLFVTSSRPLHGIHPHNPHAITPPAPVSLETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPPGKP
Subjt:  MAHRSLHLNSFFPLVALLLLLLLLHSLFVTSSRPLHGIHPHNPHAITPPAPVSLETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPPGKP

A0A1R3KLK5 Uncharacterized protein5.5e-0970.21Show/hide
Query:  AITPPAPVSLETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPPGKP
        AI PP   S+   F INRYK  ETDAFRPTSPGHSPGVGHN PP  P
Subjt:  AITPPAPVSLETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPPGKP

A0A5C7HCP5 Uncharacterized protein3.2e-0947.13Show/hide
Query:  NSFFPLVALLLLLLLLHSLFVTSSRPLHGIH----PHNPHAITPPAPVSLETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPPGKP
        +  F L  L++LLL  +   +++SRPL   H    P +  ++  P P S+   ++INRYK  E +AFRPTSPGHSPGVGHNEPP  P
Subjt:  NSFFPLVALLLLLLLLHSLFVTSSRPLHGIH----PHNPHAITPPAPVSLETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPPGKP

F6HJ28 Uncharacterized protein7.2e-0947.25Show/hide
Query:  AHRSLHLNSFFPLVALLLLLLLLHSLFVTSSRPLHGIHPHNP-HAITPPAPVSLETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPPGKP
        ++  +H+ S F    ++ L+L  H   +T+SRPL    P  P  A     P+S+   F INR+K VETDA+RPTSPGHSPGVGH  PPG P
Subjt:  AHRSLHLNSFFPLVALLLLLLLLHSLFVTSSRPLHGIHPHNP-HAITPPAPVSLETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPPGKP

W9S854 Uncharacterized protein4.5e-1155.84Show/hide
Query:  LLLLLLLHSL-FVTSSRPLHGIHP-----HNPHAITPPAPVSLETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPP
        + +LLLLHS+ F +SSRPLH +HP       P   + P P S +  FS+N YK  ETDAFRPT+PGHSPGVGH  PP
Subjt:  LLLLLLLHSL-FVTSSRPLHGIHP-----HNPHAITPPAPVSLETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPP

SwissProt top hitse value%identityAlignment
P0DN99 Precursor of CEP125.0e-0740.23Show/hide
Query:  NSFFPLVALLLLLLLLHSLFVTSS---RPLHGIHPHNPHAITPPAPVSLETS-FSINRYKYVETDAFRPTSPGHSPGVGHNEPPGKP
        NS   L   +L LL+LH  F T++   +P+    P +    +PP+P   +   F IN YK +E  AFRPT  G S G+GH +PPG P
Subjt:  NSFFPLVALLLLLLLLHSLFVTSS---RPLHGIHPHNPHAITPPAPVSLETS-FSINRYKYVETDAFRPTSPGHSPGVGHNEPPGKP

Q3EBM6 Precursor of CEP47.9e-0548.94Show/hide
Query:  TPPAPVSLETSF--SINRYKYVETDAFRPTSPGHSPGVGHNEPPGKP
        +PP P   +  +   INR+K +E DAFRPT  G S G+GH  PPG P
Subjt:  TPPAPVSLETSF--SINRYKYVETDAFRPTSPGHSPGVGHNEPPGKP

Arabidopsis top hitse value%identityAlignment
AT1G31670.1 Copper amine oxidase family protein5.1e-0739.29Show/hide
Query:  NSFFPLVALLLLLLLLHSLFVTSS---RPLHGIHPHNPHAITPPAPVSLETS-FSINRYKYVETDAFRPTSPGHSPGVGHNEPP
        NS   L   +L LL+LH  F T++   +P+    P +    +PP+P   +   F IN YK +E  AFRPT  G S G+GH +PP
Subjt:  NSFFPLVALLLLLLLLHSLFVTSS---RPLHGIHPHNPHAITPPAPVSLETS-FSINRYKYVETDAFRPTSPGHSPGVGHNEPP

AT2G35612.1 FUNCTIONS IN: molecular_function unknown5.6e-0648.94Show/hide
Query:  TPPAPVSLETSF--SINRYKYVETDAFRPTSPGHSPGVGHNEPPGKP
        +PP P   +  +   INR+K +E DAFRPT  G S G+GH  PPG P
Subjt:  TPPAPVSLETSF--SINRYKYVETDAFRPTSPGHSPGVGHNEPPGKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCACAGAAGCTTACATTTGAATAGTTTCTTTCCCCTTGTCGCTCTCCTCCTTCTCCTCCTCCTTCTTCACTCTCTTTTCGTAACATCATCAAGGCCATTGCATGG
CATTCATCCCCATAATCCCCATGCTATAACACCTCCTGCTCCGGTATCATTGGAGACATCGTTCTCCATAAACCGGTATAAATATGTCGAAACAGATGCATTTCGACCGA
CCTCGCCCGGACATAGCCCTGGGGTTGGCCACAATGAGCCACCAGGTAAACCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCACAGAAGCTTACATTTGAATAGTTTCTTTCCCCTTGTCGCTCTCCTCCTTCTCCTCCTCCTTCTTCACTCTCTTTTCGTAACATCATCAAGGCCATTGCATGG
CATTCATCCCCATAATCCCCATGCTATAACACCTCCTGCTCCGGTATCATTGGAGACATCGTTCTCCATAAACCGGTATAAATATGTCGAAACAGATGCATTTCGACCGA
CCTCGCCCGGACATAGCCCTGGGGTTGGCCACAATGAGCCACCAGGTAAACCGTAG
Protein sequenceShow/hide protein sequence
MAHRSLHLNSFFPLVALLLLLLLLHSLFVTSSRPLHGIHPHNPHAITPPAPVSLETSFSINRYKYVETDAFRPTSPGHSPGVGHNEPPGKP