| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0036907.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] | 8.6e-58 | 55.17 | Show/hide |
Query: MYKPGLENKAADALSRIPPTAHLNQLTAHTLVDIKVIREEVDKDEYLKNIIDRIQREEEVKNYTLQQGILRYKG--------------------------
+YKPGL+N+ DALSR+P + HLNQLTA L+++K+I+EEV+KD+ K I+ +++ EV NY LQQ +L+YKG
Subjt: MYKPGLENKAADALSRIPPTAHLNQLTAHTLVDIKVIREEVDKDEYLKNIIDRIQREEEVKNYTLQQGILRYKG--------------------------
Query: ----RTYKRMTGELFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYAHFLSLKHPFDAK
RTYKR+TGELFW GMK +V+++CEEC+ CQ NKTL+LSPAGLLTPLE+P ++W+DI MDFI+GLPK+ G +VIFV+VDRFSKYAHFL+LKHPFD K
Subjt: ----RTYKRMTGELFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYAHFLSLKHPFDAK
Query: MVA
++A
Subjt: MVA
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| KAA0049776.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.5e-57 | 58.33 | Show/hide |
Query: MYKPGLENKAADALSRIPPTAHLNQLTAHTLVDIKVIREEVDKDEYLKNIIDRIQREE-EVKNYTLQQGILRYKG-------------------------
+YKPGLENKAADALSRI PTAHLNQLTA L+D++VI++EV KD L+ I+ I+ + E+ +YT QGIL++KG
Subjt: MYKPGLENKAADALSRIPPTAHLNQLTAHTLVDIKVIREEVDKDEYLKNIIDRIQREE-EVKNYTLQQGILRYKG-------------------------
Query: -----RTYKRMTGELFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYAHFLSLKHPFDA
RTYKRM GEL+W GMK +V++YCEECM CQ+NK+ ALSPAGLL PLE+P +W DISMDFIEGLPKS G++VI VVVDR SKYAHFL+LKHP+ A
Subjt: -----RTYKRMTGELFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYAHFLSLKHPFDA
Query: KMVA
K VA
Subjt: KMVA
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| KAA0066077.1 Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa] | 3.6e-64 | 62.07 | Show/hide |
Query: MYKPGLENKAADALSRIPPTAHLNQLTAHTLVDIKVIREEVDKDEYLKNIIDRIQREEEVKNYTLQQGILRYKG--------------------------
+YKPGLENKAADALSR+P LNQLT L+D+K+IREEV +D+YLK II RI EEV YT+Q G+L+YKG
Subjt: MYKPGLENKAADALSRIPPTAHLNQLTAHTLVDIKVIREEVDKDEYLKNIIDRIQREEEVKNYTLQQGILRYKG--------------------------
Query: ----RTYKRMTGELFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYAHFLSLKHPFDAK
RTYKR+TGELFW GMK +V++YCEEC CQRNK+L+LSPAGLLTPLE+P R+W+ ISMDFIEGLPK+ GFDVI VVVDRFSKYAHFL+LKHPFDA+
Subjt: ----RTYKRMTGELFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYAHFLSLKHPFDAK
Query: MVA
+VA
Subjt: MVA
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| TYK15990.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.5e-57 | 58.33 | Show/hide |
Query: MYKPGLENKAADALSRIPPTAHLNQLTAHTLVDIKVIREEVDKDEYLKNIIDRIQREE-EVKNYTLQQGILRYKG-------------------------
+YKPGLENKAADALSRI PTAHLNQLTA L+D++VI++EV KD L+ I+ I+ + E+ +YT QGIL++KG
Subjt: MYKPGLENKAADALSRIPPTAHLNQLTAHTLVDIKVIREEVDKDEYLKNIIDRIQREE-EVKNYTLQQGILRYKG-------------------------
Query: -----RTYKRMTGELFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYAHFLSLKHPFDA
RTYKRM GEL+W GMK +V++YCEECM CQ+NK+ ALSPAGLL PLE+P +W DISMDFIEGLPKS G++VI VVVDR SKYAHFL+LKHP+ A
Subjt: -----RTYKRMTGELFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYAHFLSLKHPFDA
Query: KMVA
K VA
Subjt: KMVA
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| TYK23090.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.5e-57 | 58.33 | Show/hide |
Query: MYKPGLENKAADALSRIPPTAHLNQLTAHTLVDIKVIREEVDKDEYLKNIIDRIQREE-EVKNYTLQQGILRYKG-------------------------
+YKPGLENKAADALSRI PTAHLNQLTA L+D++VI++EV KD L+ I+ I+ + E+ +YT QGIL++KG
Subjt: MYKPGLENKAADALSRIPPTAHLNQLTAHTLVDIKVIREEVDKDEYLKNIIDRIQREE-EVKNYTLQQGILRYKG-------------------------
Query: -----RTYKRMTGELFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYAHFLSLKHPFDA
RTYKRM GEL+W GMK +V++YCEECM CQ+NK+ ALSPAGLL PLE+P +W DISMDFIEGLPKS G++VI VVVDR SKYAHFL+LKHP+ A
Subjt: -----RTYKRMTGELFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYAHFLSLKHPFDA
Query: KMVA
K VA
Subjt: KMVA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T5M0 Transposon Ty3-G Gag-Pol polyprotein | 4.2e-58 | 55.17 | Show/hide |
Query: MYKPGLENKAADALSRIPPTAHLNQLTAHTLVDIKVIREEVDKDEYLKNIIDRIQREEEVKNYTLQQGILRYKG--------------------------
+YKPGL+N+ DALSR+P + HLNQLTA L+++K+I+EEV+KD+ K I+ +++ EV NY LQQ +L+YKG
Subjt: MYKPGLENKAADALSRIPPTAHLNQLTAHTLVDIKVIREEVDKDEYLKNIIDRIQREEEVKNYTLQQGILRYKG--------------------------
Query: ----RTYKRMTGELFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYAHFLSLKHPFDAK
RTYKR+TGELFW GMK +V+++CEEC+ CQ NKTL+LSPAGLLTPLE+P ++W+DI MDFI+GLPK+ G +VIFV+VDRFSKYAHFL+LKHPFD K
Subjt: ----RTYKRMTGELFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYAHFLSLKHPFDAK
Query: MVA
++A
Subjt: MVA
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| A0A5A7U2S1 Ty3/gypsy retrotransposon protein | 7.1e-58 | 58.33 | Show/hide |
Query: MYKPGLENKAADALSRIPPTAHLNQLTAHTLVDIKVIREEVDKDEYLKNIIDRIQREE-EVKNYTLQQGILRYKG-------------------------
+YKPGLENKAADALSRI PTAHLNQLTA L+D++VI++EV KD L+ I+ I+ + E+ +YT QGIL++KG
Subjt: MYKPGLENKAADALSRIPPTAHLNQLTAHTLVDIKVIREEVDKDEYLKNIIDRIQREE-EVKNYTLQQGILRYKG-------------------------
Query: -----RTYKRMTGELFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYAHFLSLKHPFDA
RTYKRM GEL+W GMK +V++YCEECM CQ+NK+ ALSPAGLL PLE+P +W DISMDFIEGLPKS G++VI VVVDR SKYAHFL+LKHP+ A
Subjt: -----RTYKRMTGELFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYAHFLSLKHPFDA
Query: KMVA
K VA
Subjt: KMVA
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| A0A5A7VG68 Transposon Tf2-9 polyprotein | 1.7e-64 | 62.07 | Show/hide |
Query: MYKPGLENKAADALSRIPPTAHLNQLTAHTLVDIKVIREEVDKDEYLKNIIDRIQREEEVKNYTLQQGILRYKG--------------------------
+YKPGLENKAADALSR+P LNQLT L+D+K+IREEV +D+YLK II RI EEV YT+Q G+L+YKG
Subjt: MYKPGLENKAADALSRIPPTAHLNQLTAHTLVDIKVIREEVDKDEYLKNIIDRIQREEEVKNYTLQQGILRYKG--------------------------
Query: ----RTYKRMTGELFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYAHFLSLKHPFDAK
RTYKR+TGELFW GMK +V++YCEEC CQRNK+L+LSPAGLLTPLE+P R+W+ ISMDFIEGLPK+ GFDVI VVVDRFSKYAHFL+LKHPFDA+
Subjt: ----RTYKRMTGELFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYAHFLSLKHPFDAK
Query: MVA
+VA
Subjt: MVA
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| A0A5D3CXB1 Ty3/gypsy retrotransposon protein | 7.1e-58 | 58.33 | Show/hide |
Query: MYKPGLENKAADALSRIPPTAHLNQLTAHTLVDIKVIREEVDKDEYLKNIIDRIQREE-EVKNYTLQQGILRYKG-------------------------
+YKPGLENKAADALSRI PTAHLNQLTA L+D++VI++EV KD L+ I+ I+ + E+ +YT QGIL++KG
Subjt: MYKPGLENKAADALSRIPPTAHLNQLTAHTLVDIKVIREEVDKDEYLKNIIDRIQREE-EVKNYTLQQGILRYKG-------------------------
Query: -----RTYKRMTGELFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYAHFLSLKHPFDA
RTYKRM GEL+W GMK +V++YCEECM CQ+NK+ ALSPAGLL PLE+P +W DISMDFIEGLPKS G++VI VVVDR SKYAHFL+LKHP+ A
Subjt: -----RTYKRMTGELFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYAHFLSLKHPFDA
Query: KMVA
K VA
Subjt: KMVA
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| A0A5D3DI73 Ty3/gypsy retrotransposon protein | 7.1e-58 | 58.33 | Show/hide |
Query: MYKPGLENKAADALSRIPPTAHLNQLTAHTLVDIKVIREEVDKDEYLKNIIDRIQREE-EVKNYTLQQGILRYKG-------------------------
+YKPGLENKAADALSRI PTAHLNQLTA L+D++VI++EV KD L+ I+ I+ + E+ +YT QGIL++KG
Subjt: MYKPGLENKAADALSRIPPTAHLNQLTAHTLVDIKVIREEVDKDEYLKNIIDRIQREE-EVKNYTLQQGILRYKG-------------------------
Query: -----RTYKRMTGELFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYAHFLSLKHPFDA
RTYKRM GEL+W GMK +V++YCEECM CQ+NK+ ALSPAGLL PLE+P +W DISMDFIEGLPKS G++VI VVVDR SKYAHFL+LKHP+ A
Subjt: -----RTYKRMTGELFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYAHFLSLKHPFDA
Query: KMVA
K VA
Subjt: KMVA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P0CT34 Transposon Tf2-1 polyprotein | 1.2e-14 | 29.3 | Show/hide |
Query: YKPGLENKAADALSR-------IPPTAHLNQLTAHTLVDI-----KVIREEVDKDEYLKNIIDRIQREEEVKNYTLQQGIL------------RYKGRTY
Y+PG N ADALSR IP + N + + I + E D L N+++ + E +N L+ G+L RT
Subjt: YKPGLENKAADALSR-------IPPTAHLNQLTAHTLVDI-----KVIREEVDKDEYLKNIIDRIQREEEVKNYTLQQGIL------------RYKGRTY
Query: KRMTGE-------------------LFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYA
+ E W G++ +++ Y + C TCQ NK+ P G L P+ +R WE +SMDFI LP+S G++ +FVVVDRFSK A
Subjt: KRMTGE-------------------LFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYA
Query: HFLSLKHPFDAKMVA
+ A+ A
Subjt: HFLSLKHPFDAKMVA
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| P0CT35 Transposon Tf2-2 polyprotein | 1.2e-14 | 29.3 | Show/hide |
Query: YKPGLENKAADALSR-------IPPTAHLNQLTAHTLVDI-----KVIREEVDKDEYLKNIIDRIQREEEVKNYTLQQGIL------------RYKGRTY
Y+PG N ADALSR IP + N + + I + E D L N+++ + E +N L+ G+L RT
Subjt: YKPGLENKAADALSR-------IPPTAHLNQLTAHTLVDI-----KVIREEVDKDEYLKNIIDRIQREEEVKNYTLQQGIL------------RYKGRTY
Query: KRMTGE-------------------LFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYA
+ E W G++ +++ Y + C TCQ NK+ P G L P+ +R WE +SMDFI LP+S G++ +FVVVDRFSK A
Subjt: KRMTGE-------------------LFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYA
Query: HFLSLKHPFDAKMVA
+ A+ A
Subjt: HFLSLKHPFDAKMVA
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| P0CT36 Transposon Tf2-3 polyprotein | 1.2e-14 | 29.3 | Show/hide |
Query: YKPGLENKAADALSR-------IPPTAHLNQLTAHTLVDI-----KVIREEVDKDEYLKNIIDRIQREEEVKNYTLQQGIL------------RYKGRTY
Y+PG N ADALSR IP + N + + I + E D L N+++ + E +N L+ G+L RT
Subjt: YKPGLENKAADALSR-------IPPTAHLNQLTAHTLVDI-----KVIREEVDKDEYLKNIIDRIQREEEVKNYTLQQGIL------------RYKGRTY
Query: KRMTGE-------------------LFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYA
+ E W G++ +++ Y + C TCQ NK+ P G L P+ +R WE +SMDFI LP+S G++ +FVVVDRFSK A
Subjt: KRMTGE-------------------LFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYA
Query: HFLSLKHPFDAKMVA
+ A+ A
Subjt: HFLSLKHPFDAKMVA
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| P0CT41 Transposon Tf2-12 polyprotein | 1.2e-14 | 29.3 | Show/hide |
Query: YKPGLENKAADALSR-------IPPTAHLNQLTAHTLVDI-----KVIREEVDKDEYLKNIIDRIQREEEVKNYTLQQGIL------------RYKGRTY
Y+PG N ADALSR IP + N + + I + E D L N+++ + E +N L+ G+L RT
Subjt: YKPGLENKAADALSR-------IPPTAHLNQLTAHTLVDI-----KVIREEVDKDEYLKNIIDRIQREEEVKNYTLQQGIL------------RYKGRTY
Query: KRMTGE-------------------LFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYA
+ E W G++ +++ Y + C TCQ NK+ P G L P+ +R WE +SMDFI LP+S G++ +FVVVDRFSK A
Subjt: KRMTGE-------------------LFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYA
Query: HFLSLKHPFDAKMVA
+ A+ A
Subjt: HFLSLKHPFDAKMVA
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| Q9UR07 Transposon Tf2-11 polyprotein | 1.2e-14 | 29.3 | Show/hide |
Query: YKPGLENKAADALSR-------IPPTAHLNQLTAHTLVDI-----KVIREEVDKDEYLKNIIDRIQREEEVKNYTLQQGIL------------RYKGRTY
Y+PG N ADALSR IP + N + + I + E D L N+++ + E +N L+ G+L RT
Subjt: YKPGLENKAADALSR-------IPPTAHLNQLTAHTLVDI-----KVIREEVDKDEYLKNIIDRIQREEEVKNYTLQQGIL------------RYKGRTY
Query: KRMTGE-------------------LFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYA
+ E W G++ +++ Y + C TCQ NK+ P G L P+ +R WE +SMDFI LP+S G++ +FVVVDRFSK A
Subjt: KRMTGE-------------------LFWVGMKAEVRRYCEECMTCQRNKTLALSPAGLLTPLEVPKRVWEDISMDFIEGLPKSMGFDVIFVVVDRFSKYA
Query: HFLSLKHPFDAKMVA
+ A+ A
Subjt: HFLSLKHPFDAKMVA
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