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CSPI04G12530 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G12530
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr4:10938371..10938837
RNA-Seq ExpressionCSPI04G12530
SyntenyCSPI04G12530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040112.1 hypothetical protein E6C27_scaffold366G00870 [Cucumis melo var. makuwa]1.2e-3362.86Show/hide
Query:  MFLTSYFLYAENPERGVRRHNNRFGHQIRKGKWSEGMKKGKSEVKWKPKSRNSFQNGEPNHFIVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQ
        M L SYFLY ENP           G +  K   +    +G++                  + IVLSVAHLSAD SQSIARFPDPLTSHQLLYLLFAFPLQ
Subjt:  MFLTSYFLYAENPERGVRRHNNRFGHQIRKGKWSEGMKKGKSEVKWKPKSRNSFQNGEPNHFIVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQ

Query:  QLSRLALSLWTLFCVPPPGSFYYYYYSSDSDLSSYDYASD
        QLSRLALSLWT FCVPPPGSFYYYYYSSDSDLSSY YASD
Subjt:  QLSRLALSLWTLFCVPPPGSFYYYYYSSDSDLSSYDYASD

PON98040.1 hypothetical protein TorRG33x02_061140 [Trema orientale]1.6e-1769.44Show/hide
Query:  NHFIVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFYYYYYSSDSD
        N  +VLSVAH+SADA Q +A FP+ L+SHQLL L+F FPLQQL RLAL LWT  C+PPP SFY Y YSSDSD
Subjt:  NHFIVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFYYYYYSSDSD

XP_022153861.1 uncharacterized protein LOC111021275 [Momordica charantia]1.4e-2689.04Show/hide
Query:  IVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFYYYYYSSDSDLSSY
        IVLSVAHLSADASQ IA FPD LTSHQLLYLLF FPLQQLSRLALS WT FCVPPPGSFYYYYYSSDSD SS+
Subjt:  IVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFYYYYYSSDSDLSSY

XP_022958637.1 uncharacterized protein LOC111459803 [Cucurbita moschata]4.6e-2582.67Show/hide
Query:  NHFIVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFYYYYYSSDSDLSS
        N  IVLSVAHLSADASQ IAR PD LTSHQLLY+LF++PLQQLSRLALS+WT  CVPPPGSFYYYYYSSD D SS
Subjt:  NHFIVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFYYYYYSSDSDLSS

XP_030478483.1 uncharacterized protein LOC115695566 [Cannabis sativa]2.5e-1563.89Show/hide
Query:  NHFIVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFYYYYYSSDSD
        N  +V+SVAH+SADA Q +A FP+ L+S QLL L+F FPLQQL R AL LWT  C+PPP SFY Y YSSD D
Subjt:  NHFIVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFYYYYYSSDSD

TrEMBL top hitse value%identityAlignment
A0A0A0L0B8 Uncharacterized protein1.3e-73100Show/hide
Query:  MFLTSYFLYAENPERGVRRHNNRFGHQIRKGKWSEGMKKGKSEVKWKPKSRNSFQNGEPNHFIVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQ
        MFLTSYFLYAENPERGVRRHNNRFGHQIRKGKWSEGMKKGKSEVKWKPKSRNSFQNGEPNHFIVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQ
Subjt:  MFLTSYFLYAENPERGVRRHNNRFGHQIRKGKWSEGMKKGKSEVKWKPKSRNSFQNGEPNHFIVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQ

Query:  QLSRLALSLWTLFCVPPPGSFYYYYYSSDSDLSSYDYASD
        QLSRLALSLWTLFCVPPPGSFYYYYYSSDSDLSSYDYASD
Subjt:  QLSRLALSLWTLFCVPPPGSFYYYYYSSDSDLSSYDYASD

A0A2P5FJR7 Uncharacterized protein7.6e-1869.44Show/hide
Query:  NHFIVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFYYYYYSSDSD
        N  +VLSVAH+SADA Q +A FP+ L+SHQLL L+F FPLQQL RLAL LWT  C+PPP SFY Y YSSDSD
Subjt:  NHFIVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFYYYYYSSDSD

A0A5A7T9K4 Uncharacterized protein5.8e-3462.86Show/hide
Query:  MFLTSYFLYAENPERGVRRHNNRFGHQIRKGKWSEGMKKGKSEVKWKPKSRNSFQNGEPNHFIVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQ
        M L SYFLY ENP           G +  K   +    +G++                  + IVLSVAHLSAD SQSIARFPDPLTSHQLLYLLFAFPLQ
Subjt:  MFLTSYFLYAENPERGVRRHNNRFGHQIRKGKWSEGMKKGKSEVKWKPKSRNSFQNGEPNHFIVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQ

Query:  QLSRLALSLWTLFCVPPPGSFYYYYYSSDSDLSSYDYASD
        QLSRLALSLWT FCVPPPGSFYYYYYSSDSDLSSY YASD
Subjt:  QLSRLALSLWTLFCVPPPGSFYYYYYSSDSDLSSYDYASD

A0A6J1DKC2 uncharacterized protein LOC1110212756.9e-2789.04Show/hide
Query:  IVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFYYYYYSSDSDLSSY
        IVLSVAHLSADASQ IA FPD LTSHQLLYLLF FPLQQLSRLALS WT FCVPPPGSFYYYYYSSDSD SS+
Subjt:  IVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFYYYYYSSDSDLSSY

A0A6J1H2D5 uncharacterized protein LOC1114598032.2e-2582.67Show/hide
Query:  NHFIVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFYYYYYSSDSDLSS
        N  IVLSVAHLSADASQ IAR PD LTSHQLLY+LF++PLQQLSRLALS+WT  CVPPPGSFYYYYYSSD D SS
Subjt:  NHFIVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFYYYYYSSDSDLSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55365.1 unknown protein1.2e-0739.76Show/hide
Query:  NHFIVLSVAHLSADASQSIARFPDP--LTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFYYYYYSSDSDLSSYDYASD
        N  +V++VA +S D  Q I R P    + + QL  +   FP+ QLSR  L LWT  C+P   SFY Y Y + S  SS +   D
Subjt:  NHFIVLSVAHLSADASQSIARFPDP--LTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFYYYYYSSDSDLSSYDYASD

AT5G56520.1 unknown protein7.1e-0842.86Show/hide
Query:  VLSVAHLSADASQSIARFP--DPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFYYYYYSSDSD
        V+SVAH+SA+  Q +   P  D ++S ++L L+  FPLQQL R  L  W   CVPPP   Y+     D D
Subjt:  VLSVAHLSADASQSIARFP--DPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFYYYYYSSDSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTTGACCTCTTACTTTCTCTACGCCGAAAATCCCGAACGTGGAGTCCGTCGCCACAACAACAGATTTGGGCACCAAATTAGGAAAGGAAAATGGAGCGAAGGGAT
GAAAAAGGGGAAGAGCGAAGTCAAATGGAAGCCGAAAAGCAGAAACTCCTTCCAGAACGGAGAGCCTAATCACTTTATAGTCTTATCGGTCGCTCATTTATCAGCGGATG
CTTCGCAATCCATTGCTCGCTTTCCAGATCCCCTCACCAGCCACCAACTTCTTTACCTTCTCTTCGCTTTCCCTCTTCAACAGCTCTCTCGCCTTGCCCTCTCTCTTTGG
ACCTTATTCTGTGTTCCTCCACCTGGTTCTTTCTACTATTACTACTATTCCTCTGACTCTGATCTCTCTTCCTACGACTATGCTTCCGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTTGACCTCTTACTTTCTCTACGCCGAAAATCCCGAACGTGGAGTCCGTCGCCACAACAACAGATTTGGGCACCAAATTAGGAAAGGAAAATGGAGCGAAGGGAT
GAAAAAGGGGAAGAGCGAAGTCAAATGGAAGCCGAAAAGCAGAAACTCCTTCCAGAACGGAGAGCCTAATCACTTTATAGTCTTATCGGTCGCTCATTTATCAGCGGATG
CTTCGCAATCCATTGCTCGCTTTCCAGATCCCCTCACCAGCCACCAACTTCTTTACCTTCTCTTCGCTTTCCCTCTTCAACAGCTCTCTCGCCTTGCCCTCTCTCTTTGG
ACCTTATTCTGTGTTCCTCCACCTGGTTCTTTCTACTATTACTACTATTCCTCTGACTCTGATCTCTCTTCCTACGACTATGCTTCCGATTGA
Protein sequenceShow/hide protein sequence
MFLTSYFLYAENPERGVRRHNNRFGHQIRKGKWSEGMKKGKSEVKWKPKSRNSFQNGEPNHFIVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLW
TLFCVPPPGSFYYYYYSSDSDLSSYDYASD