CuGenDBv2

Gene ID	CSPI04G12760
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Non-structural maintenance of chromosomes element 1 homolog
Genome location	Chr4:11054991..11059033
RNA-Seq Expression	CSPI04G12760
Synteny	CSPI04G12760
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0006301 - postreplication repair (biological process) GO:0005634 - nucleus (cellular component) GO:0030915 - Smc5-Smc6 complex (cellular component) GO:0004842 - ubiquitin-protein transferase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR011513 - Non-structural maintenance of chromosomes element 1 IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR014857 - Zinc finger, RING-like IPR036388 - Winged helix-like DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8649414.1 hypothetical protein Csa_021680 [Cucumis sativus]

2.3e-165

88.89

Show/hide

Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
        MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL

Query:  FKAIVEAIAQDSSAQGGISNISALNLQLENQ------------LKREPANVPAPCICISLGDTGSQSQV---IPAAFKNFSKSHKEKTIAELAQDKWLDC
        FKAIVEAIAQDSSAQGGISNISALNLQLENQ            +++  +   +P +    G  G +  V   +PAAFKNFSKSHKEKTIAELAQDKWLDC
Subjt:  FKAIVEAIAQDSSAQGGISNISALNLQLENQ------------LKREPANVPAPCICISLGDTGSQSQV---IPAAFKNFSKSHKEKTIAELAQDKWLDC

Query:  TPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPS
        TPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPS
Subjt:  TPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPS

Query:  SHKRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR
        SHKRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR
Subjt:  SHKRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR

XP_008449859.1 PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Cucumis melo]

1.1e-162

90.24

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
        MPELSWRHHTLIQSLLSRGPLREDQFHLLFK+ITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL

Query:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLD
        FKAIVEAIAQD SAQGGISNISALNLQLENQ                LGDTG QSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTP+GFVNLGVRSFLD
Subjt:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLD

Query:  LRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDL
        LRSWFRSNDVPSCEVCNEAGVKAELCS+EVCTVRVH+YCLKKMLSNKKSK+ACPGCGTRWQST SNIE KEE DEPDTRTQDQPSSHKRKKS+LNVDIDL
Subjt:  LRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDL

Query:  GPNEDSTAEASQPPP-TRRTTRSSARQR
        GPNEDSTAEASQPPP TRR TR+S RQR
Subjt:  GPNEDSTAEASQPPP-TRRTTRSSARQR

XP_031740711.1 non-structural maintenance of chromosomes element 1 homolog [Cucumis sativus]

2.3e-165

88.89

Show/hide

Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
        MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL

Query:  FKAIVEAIAQDSSAQGGISNISALNLQLENQ------------LKREPANVPAPCICISLGDTGSQSQV---IPAAFKNFSKSHKEKTIAELAQDKWLDC
        FKAIVEAIAQDSSAQGGISNISALNLQLENQ            +++  +   +P +    G  G +  V   +PAAFKNFSKSHKEKTIAELAQDKWLDC
Subjt:  FKAIVEAIAQDSSAQGGISNISALNLQLENQ------------LKREPANVPAPCICISLGDTGSQSQV---IPAAFKNFSKSHKEKTIAELAQDKWLDC

Query:  TPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPS
        TPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPS
Subjt:  TPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPS

Query:  SHKRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR
        SHKRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR
Subjt:  SHKRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR

XP_038900598.1 non-structural maintenance of chromosomes element 1 homolog isoform X1 [Benincasa hispida]

1.5e-151

84.1

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
        MPELSWRHHTLIQ+LL+RGPLRED FHLLF +ITGKTPDNDQQ+FNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL

Query:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLD
        +KAIVEAIAQD SAQGGISNISALNLQLENQ                +GDTGSQSQVIPAAFKNFS S KEKTIAELAQDKWL C+PDGFVNLGVRSFLD
Subjt:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLD

Query:  LRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDL
        LRSWFRSNDVPSCEVCNEAGVKAELC+TE CTVRVH+YCLKKMLSNKKSK+ACPGCG +W+ST SNIE +EEEDEPDT TQDQPSSHKRKKSRLN+DIDL
Subjt:  LRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDL

Query:  GPNEDSTAEASQPPPTRRTTRSSARQR
        G NED  AEA QPP +RR TR SAR R
Subjt:  GPNEDSTAEASQPPPTRRTTRSSARQR

XP_038900599.1 non-structural maintenance of chromosomes element 1 homolog isoform X2 [Benincasa hispida]

1.5e-151

84.1

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
        MPELSWRHHTLIQ+LL+RGPLRED FHLLF +ITGKTPDNDQQ+FNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL

Query:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLD
        +KAIVEAIAQD SAQGGISNISALNLQLENQ                +GDTGSQSQVIPAAFKNFS S KEKTIAELAQDKWL C+PDGFVNLGVRSFLD
Subjt:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLD

Query:  LRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDL
        LRSWFRSNDVPSCEVCNEAGVKAELC+TE CTVRVH+YCLKKMLSNKKSK+ACPGCG +W+ST SNIE +EEEDEPDT TQDQPSSHKRKKSRLN+DIDL
Subjt:  LRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDL

Query:  GPNEDSTAEASQPPPTRRTTRSSARQR
        G NED  AEA QPP +RR TR SAR R
Subjt:  GPNEDSTAEASQPPPTRRTTRSSARQR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KZ19 Non-structural maintenance of chromosomes element 1 homolog

2.1e-172

95.11

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
        MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL

Query:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLD
        FKAIVEAIAQDSSAQGGISNISALNLQLENQ                LGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLD
Subjt:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLD

Query:  LRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDL
        LRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDL
Subjt:  LRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDL

Query:  GPNEDSTAEASQPPPTRRTTRSSARQR
        GPNEDSTAEASQPPPTRRTTRSSARQR
Subjt:  GPNEDSTAEASQPPPTRRTTRSSARQR

A0A1S3BMD8 Non-structural maintenance of chromosomes element 1 homolog

5.3e-163

90.24

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
        MPELSWRHHTLIQSLLSRGPLREDQFHLLFK+ITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL

Query:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLD
        FKAIVEAIAQD SAQGGISNISALNLQLENQ                LGDTG QSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTP+GFVNLGVRSFLD
Subjt:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLD

Query:  LRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDL
        LRSWFRSNDVPSCEVCNEAGVKAELCS+EVCTVRVH+YCLKKMLSNKKSK+ACPGCGTRWQST SNIE KEE DEPDTRTQDQPSSHKRKKS+LNVDIDL
Subjt:  LRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDL

Query:  GPNEDSTAEASQPPP-TRRTTRSSARQR
        GPNEDSTAEASQPPP TRR TR+S RQR
Subjt:  GPNEDSTAEASQPPP-TRRTTRSSARQR

A0A6J1DI86 Non-structural maintenance of chromosomes element 1 homolog

4.8e-140

79.03

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
        M ELSWRHHTLIQ+LL+RGPLREDQFHL+F +ITGK+PDNDQQ+FN+YLL INKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL

Query:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQ-SQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFL
        +KAIVEAIAQD SAQGGISNI+AL+LQLENQ                LGD GSQ SQVIP AFKNFS S KEKTIAELAQD+WL+CTPDGFVNLGVRSFL
Subjt:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQ-SQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFL

Query:  DLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDID
        DLRSWFR+ND+PSCEVCNEAGVKAELC  E CTVRVHQYCLKKMLSNKKSK+ACPGCGT+W+ST +N+E KEEEDEPD RTQ Q SS +RKKSRLN+D+D
Subjt:  DLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDID

Query:  LGPNEDSTAEASQPPP-TRRTTRSSARQR
           ++ + A ASQPPP TRR TRSSARQR
Subjt:  LGPNEDSTAEASQPPP-TRRTTRSSARQR

A0A6J1JYV1 Non-structural maintenance of chromosomes element 1 homolog

1.3e-140

79.09

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
        M ELSWRHHTLIQ+LL+RGPLRED FHLLF +IT K+PDND+Q+FN+YLLT+NKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL

Query:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLD
        +KAIVEAIAQD SAQGGISNI+AL+LQLENQ                LGD GSQS VIP AFKNFS S KEKTIAELAQD+WL+CTPDGFVNLGVRSFLD
Subjt:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLD

Query:  LRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDL
        LRSWFR+ND+PSCEVCNEAGVKAELCS E CTVRVH+YCLKKMLSNKKSK+ACP CGT+W+ST  N+E KEEEDEPD R Q Q SSHKRKK+RLN DID 
Subjt:  LRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDL

Query:  GPNEDS--TAEASQPPP-TRRTTRSSARQR
        GPN DS   A+ASQPPP TRR TRSSA QR
Subjt:  GPNEDS--TAEASQPPP-TRRTTRSSARQR

A0A6J1K5P2 Non-structural maintenance of chromosomes element 1 homolog

1.3e-140

79.09

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
        M ELSWRHHTLIQ+LL+RGPLRED FHLLF +IT K+PDND+Q+FN+YLLT+NKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL

Query:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLD
        +KAIVEAIAQD SAQGGISNI+AL+LQLENQ                LGD GSQS VIP AFKNFS S KEKTIAELAQD+WL+CTPDGFVNLGVRSFLD
Subjt:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLD

Query:  LRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDL
        LRSWFR+ND+PSCEVCNEAGVKAELCS E CTVRVH+YCLKKMLSNKKSK+ACP CGT+W+ST  N+E KEEEDEPD R Q Q SSHKRKK+RLN DID 
Subjt:  LRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDL

Query:  GPNEDS--TAEASQPPP-TRRTTRSSARQR
        GPN DS   A+ASQPPP TRR TRSSA QR
Subjt:  GPNEDS--TAEASQPPP-TRRTTRSSARQR

SwissProt top hits

e value

%identity

Alignment

Q6P881 Non-structural maintenance of chromosomes element 1 homolog

7.2e-08

22.03

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Query:  ELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDN-DQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALF
        +++  H   +Q L+S G +       L +        N      + ++  +NK L     ++     + DG  YY LVN V +D +K+ + Y+  ++ LF
Subjt:  ELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDN-DQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALF

Query:  KAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDL
        +  +E I    S  G    IS LNL  E Q K+                                K   E+ +    QDKWL    +G   L  R  ++L
Subjt:  KAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDL

Query:  RSWFRS--NDVPS-CEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSR
          +  +   DV   C VC++  ++ +LC  E C + +H  C   +     +   CP C   W     ++   +   +  + +Q  P   + ++SR
Subjt:  RSWFRS--NDVPS-CEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSR

Q6PAF4 Non-structural maintenance of chromosomes element 1 homolog

4.5e-10

24.89

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Query:  DGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHK
        DG  YY LVN V +D +K+ + Y+  ++ LF+  +E I    S  G  ++IS LNL  E Q K+                                K   
Subjt:  DGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHK

Query:  EKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRS--NDVPS-CEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNI
        E+ +    Q+KWL    +G   L  R  ++L  + R+   DV   C VC +  ++++LC  E C + +H  C  K   + K+   CP C   W     ++
Subjt:  EKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRS--NDVPS-CEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNI

Query:  EPKEEEDEPDTRTQDQPSSHKRKKS
             +    ++T+     ++R K+
Subjt:  EPKEEEDEPDTRTQDQPSSHKRKKS

Arabidopsis top hits

e value

%identity

Alignment

AT5G21140.1 embryo defective 1379

1.5e-90

52.13

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
        M  LSW+HHTLIQ+L+SRGPL+E +FH +F  +TG+ P   +++F+ YLL INK LS+  FEL+ CR+QYDG+V YG+VNNV+DDQSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL

Query:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLD
        FK I+EAIAQD +AQG IS+  ALN++LENQ+  E                 S  Q +P AFKNFS + KEKT+ EL +DKWL  T +  + LG+RS LD
Subjt:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLD

Query:  LRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQ-STTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDID
        LRSWFR+NDVPSCEVCNEAGVKA+LC TE C VR+H+YCLKK+LS +  K+ C GCG  W  S  +  E  EE    +  ++ Q ++ K K+ R   D  
Subjt:  LRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQ-STTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDID

Query:  LGPNEDSTAEASQPPPTRRTTRSSARQR
           +  ++  ++    TRR TRS    R
Subjt:  LGPNEDSTAEASQPPPTRRTTRSSARQR

Sequences

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CDS sequence

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ATGCCAGAACTGAGTTGGAGACATCACACTCTCATTCAATCGCTACTCTCTCGCGGCCCACTCAGAGAGGATCAGTTTCATTTGCTGTTTAAGCAAATCACTGGAAAAAC
TCCAGATAATGACCAGCAGGTTTTTAACAGTTACCTCCTGACTATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGTAGAAACCAATATGATGGACGTG
TTTACTATGGCTTGGTAAATAATGTATCTGACGACCAATCCAAGCTGGGAACAAAGTATTCAGTTCCACAGATTGCCCTTTTTAAAGCCATCGTTGAAGCAATTGCACAA
GATTCATCTGCTCAAGGTGGAATATCAAATATTTCTGCTCTTAATCTGCAGCTGGAAAATCAGTTGAAAAGAGAACCAGCAAACGTTCCAGCCCCTTGTATTTGTATCAG
TCTGGGGGATACAGGATCCCAGTCCCAAGTCATACCAGCTGCTTTCAAGAATTTCTCAAAATCTCACAAGGAAAAAACAATTGCTGAGCTTGCTCAGGATAAGTGGCTTG
ATTGCACCCCTGATGGCTTTGTAAATTTGGGCGTCCGATCGTTTCTTGATTTGCGAAGTTGGTTCCGCAGCAATGATGTACCTTCATGTGAAGTGTGCAATGAAGCTGGA
GTGAAGGCAGAGTTGTGTAGTACTGAAGTTTGCACTGTCCGGGTCCATCAGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAAGGCCTGTCCAGGTTGTGG
CACTCGATGGCAATCTACAACGTCCAACATAGAGCCCAAGGAGGAAGAGGATGAGCCGGATACACGCACTCAAGATCAACCATCATCACATAAGAGGAAGAAATCCAGGT
TGAACGTAGATATTGATTTAGGACCAAACGAAGACAGTACCGCAGAAGCTTCCCAACCTCCTCCTACAAGGAGAACAACACGAAGTTCTGCACGCCAGCGGTAG

mRNA sequence

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AAAGCGGATATCATTCGCCAAACTTCAGTGAACTGCGGGATTTAGTTGTTTCTGGATTAGGGTTCACAATGCCAGAACTGAGTTGGAGACATCACACTCTCATTCAATCG
CTACTCTCTCGCGGCCCACTCAGAGAGGATCAGTTTCATTTGCTGTTTAAGCAAATCACTGGAAAAACTCCAGATAATGACCAGCAGGTTTTTAACAGTTACCTCCTGAC
TATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGTAGAAACCAATATGATGGACGTGTTTACTATGGCTTGGTAAATAATGTATCTGACGACCAATCCA
AGCTGGGAACAAAGTATTCAGTTCCACAGATTGCCCTTTTTAAAGCCATCGTTGAAGCAATTGCACAAGATTCATCTGCTCAAGGTGGAATATCAAATATTTCTGCTCTT
AATCTGCAGCTGGAAAATCAGTTGAAAAGAGAACCAGCAAACGTTCCAGCCCCTTGTATTTGTATCAGTCTGGGGGATACAGGATCCCAGTCCCAAGTCATACCAGCTGC
TTTCAAGAATTTCTCAAAATCTCACAAGGAAAAAACAATTGCTGAGCTTGCTCAGGATAAGTGGCTTGATTGCACCCCTGATGGCTTTGTAAATTTGGGCGTCCGATCGT
TTCTTGATTTGCGAAGTTGGTTCCGCAGCAATGATGTACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTACTGAAGTTTGCACTGTCCGG
GTCCATCAGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAAGGCCTGTCCAGGTTGTGGCACTCGATGGCAATCTACAACGTCCAACATAGAGCCCAAGGA
GGAAGAGGATGAGCCGGATACACGCACTCAAGATCAACCATCATCACATAAGAGGAAGAAATCCAGGTTGAACGTAGATATTGATTTAGGACCAAACGAAGACAGTACCG
CAGAAGCTTCCCAACCTCCTCCTACAAGGAGAACAACACGAAGTTCTGCACGCCAGCGGTAGGTCTTGGAATGAGGTGCTGTTATTTTTATACAGTTTCATGTATACTAT
CATTAGTTTAGGAGTTGTAAAGTGTGCAACAAAAGCACTTTTTGATGTCTTGTCGAAATTGTCACCTTATTTATATTTATTTGAAGTGTCATTTTGAAATCTTTATACCC
AAAACCGGAATGCAAAGTGCATTACAGTACGTAAGCCAGAAGTAGAAGTTTTCTTTTACCTCCC

Protein sequence

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MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQ
DSSAQGGISNISALNLQLENQLKREPANVPAPCICISLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAG
VKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR

CSPI04G12760 (gene) of Cucumber (PI 183967) v1 genome