; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G12850 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G12850
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionExonuclease domain-containing protein
Genome locationChr4:11109494..11116335
RNA-Seq ExpressionCSPI04G12850
SyntenyCSPI04G12850
Gene Ontology termsGO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0000175 - 3'-5'-exoribonuclease activity (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR022894 - Oligoribonuclease
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142177.1 oligoribonuclease [Cucumis sativus]9.1e-141100Show/hide
Query:  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACII
        MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACII
Subjt:  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACII

Query:  TNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
        TNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
Subjt:  TNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV

Query:  DVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
        DVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
Subjt:  DVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK

XP_008449845.1 PREDICTED: oligoribonuclease [Cucumis melo]4.8e-13495.65Show/hide
Query:  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACII
        MA KPLVNAFS+LELDAEDDQIPALSTSSKDDATVSY S TGK KKEVNISGDI TGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACII
Subjt:  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACII

Query:  TNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
        TNGNLTKLVEGPDLVIHQSKECL+KMGEWCQSHHAASGLTKKV RSTISEREAEKQVI+FVKKHVC DKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
Subjt:  TNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV

Query:  DVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
        DVSS+KTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
Subjt:  DVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK

XP_022957669.1 oligoribonuclease [Cucurbita moschata]1.6e-11685.26Show/hide
Query:  MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITN
        M+P VNAFS+LELDAEDDQ+   ST SKD+A  S  S TGK KKEVNISGDIL G+RQKQ QP+A AEDYKFPLVWIDLEMTGLNVETDRILEIACIITN
Subjt:  MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITN

Query:  GNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV
        G+LTKLVEGP LVIHQSKECL+KMGEWCQSHHAASGLTKKVL+STISEREAEKQVI+FVKKHV +  LHLAGNSVY+DFIFLKKYMPDLAGLFSHVLVDV
Subjt:  GNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
        SS+K LC RW+PRD+KKAPPKENKHRAMDDIRESIMELKYYKENIFK  KK
Subjt:  SSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK

XP_038902868.1 oligoribonuclease isoform X1 [Benincasa hispida]7.5e-12790.91Show/hide
Query:  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACII
        MAMKPLVNAFS+LELDAEDDQIPALSTSSKDDAT S PS TGK KKEVNISGDILTGE+QKQGQP+  AE+YKFPLVWIDLEMTGL+VETDRILEIACII
Subjt:  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACII

Query:  TNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
        TNG+LTKLVEGPDLVIHQSKECL+KMGEWCQSHHAASGLTKKVL+STISEREAEKQVI+FVKKHV + KLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
Subjt:  TNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV

Query:  DVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
        DVSS+K LC RWYPRD+KKAPPKENKHRAMDDIRESIMELKYYK+NIFKNSKK
Subjt:  DVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK

XP_038902871.1 oligoribonuclease isoform X2 [Benincasa hispida]3.5e-11685.38Show/hide
Query:  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACII
        MAMKPLVNAFS+LELDAEDDQIPALSTSSKDDAT S PS                TGE+QKQGQP+  AE+YKFPLVWIDLEMTGL+VETDRILEIACII
Subjt:  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACII

Query:  TNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
        TNG+LTKLVEGPDLVIHQSKECL+KMGEWCQSHHAASGLTKKVL+STISEREAEKQVI+FVKKHV + KLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
Subjt:  TNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV

Query:  DVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
        DVSS+K LC RWYPRD+KKAPPKENKHRAMDDIRESIMELKYYK+NIFKNSKK
Subjt:  DVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK

TrEMBL top hitse value%identityAlignment
A0A0A0KZ28 Exonuclease domain-containing protein4.4e-141100Show/hide
Query:  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACII
        MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACII
Subjt:  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACII

Query:  TNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
        TNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
Subjt:  TNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV

Query:  DVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
        DVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
Subjt:  DVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK

A0A1S3BNX4 oligoribonuclease2.3e-13495.65Show/hide
Query:  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACII
        MA KPLVNAFS+LELDAEDDQIPALSTSSKDDATVSY S TGK KKEVNISGDI TGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACII
Subjt:  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACII

Query:  TNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
        TNGNLTKLVEGPDLVIHQSKECL+KMGEWCQSHHAASGLTKKV RSTISEREAEKQVI+FVKKHVC DKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
Subjt:  TNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV

Query:  DVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
        DVSS+KTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
Subjt:  DVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK

A0A6J1DKA2 oligoribonuclease isoform X12.3e-11384.46Show/hide
Query:  MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITN
        M+ LVNAFS+LELDAEDDQIPALST SK DAT S  S TGK KKEV+ISGDI TGERQKQ   +  AEDYK PLVWIDLEMTGLNVETDRILEIACI+TN
Subjt:  MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITN

Query:  GNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV
        GNLTKL EGPDLVIHQSKECL+KMGEWCQ+HHAASGLTKKVLRSTISEREAEKQVI+FVKK+V +    LAGNSVY DFIFLKKYMPDLAGLFSHVLVDV
Subjt:  GNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
        SS+K LC RWYP+D+KKAP KENKHRAMDDIRESIMELKYYKENIFK SKK
Subjt:  SSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK

A0A6J1H2M6 oligoribonuclease7.6e-11785.26Show/hide
Query:  MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITN
        M+P VNAFS+LELDAEDDQ+   ST SKD+A  S  S TGK KKEVNISGDIL G+RQKQ QP+A AEDYKFPLVWIDLEMTGLNVETDRILEIACIITN
Subjt:  MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITN

Query:  GNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV
        G+LTKLVEGP LVIHQSKECL+KMGEWCQSHHAASGLTKKVL+STISEREAEKQVI+FVKKHV +  LHLAGNSVY+DFIFLKKYMPDLAGLFSHVLVDV
Subjt:  GNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
        SS+K LC RW+PRD+KKAPPKENKHRAMDDIRESIMELKYYKENIFK  KK
Subjt:  SSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK

A0A6J1K8C8 oligoribonuclease2.4e-11584.46Show/hide
Query:  MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITN
        M+P VNAFS+LELDAEDDQ+   ST SKD+   S  S TGK KKEVNISGDIL GERQKQ QP+  AEDYKFPLVWIDLEMTGLNVETDRILEIACIITN
Subjt:  MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITN

Query:  GNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV
        G+LTKLVEGP LVIHQSKECL+KMGEWCQSHHAASGLTKKVL+STISEREAEKQVI FVKKHV +  LHLAGNSVY+DF FLKKYMPDLAGLFSHVLVDV
Subjt:  GNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
        SS+K LC RW+PRD+KKAPPKENKHRAMDDIRESIMELKYYKENIFK  KK
Subjt:  SSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK

SwissProt top hitse value%identityAlignment
A2VE52 Oligoribonuclease, mitochondrial6.1e-4748.13Show/hide
Query:  GQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVK
        G   A  E     +VW+DLEMTGL++E D+I+E+AC+IT+ +L  L EGP+L+I Q  E LD M +WC+ HH  SGLTK V  ST++ ++AE + + FV+
Subjt:  GQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVK

Query:  KHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFK
        +        LAGNSV+ D  FL KYMP       + ++DVS++K LC RWYP + + AP K   HRA+DDI ESI EL++Y+ NIFK
Subjt:  KHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFK

Q5U1X1 Oligoribonuclease, mitochondrial1.0e-4648.63Show/hide
Query:  AVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVC
        A  E     +VW+DLEMTGL++E D+I+E+AC+IT+ +L  L EGP+L+I Q  E LD M +WC+ HH  SGLTK V  ST++ ++AE + + FV++   
Subjt:  AVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVC

Query:  TDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFK
             LAGNSV+ D  FL K+MP       + ++DVS++K LC RWYP D + AP K   HRA+DDI ESI EL++Y+ NIFK
Subjt:  TDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFK

Q9D8S4 Oligoribonuclease, mitochondrial1.0e-4648.63Show/hide
Query:  AVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVC
        A  E     +VW+DLEMTGL++E D+I+E+AC+IT+ +L  L EGP+L+I Q  E LD M +WC+ HH  SGLTK V  ST++ ++AE + + FV++   
Subjt:  AVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVC

Query:  TDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFK
             LAGNSV+ D  FL K+MP       + ++DVS++K LC RWYP D + AP K   HRA+DDI ESI EL++Y+ NIFK
Subjt:  TDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFK

Q9Y3B8 Oligoribonuclease, mitochondrial3.6e-4748.66Show/hide
Query:  GQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVK
        G   A  E     +VW+DLEMTGL++E D+I+E+AC+IT+ +L  L EGP+L+I Q  E LD M +WC+ HH  SGLTK V  STI+ ++AE + + FV+
Subjt:  GQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVK

Query:  KHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFK
        +        LAGNSV+ D  FL KYMP       + ++DVS++K LC RWYP + + AP K   HRA+DDI ESI EL++Y+ NIFK
Subjt:  KHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFK

Q9ZVE0 Oligoribonuclease5.1e-7861.54Show/hide
Query:  MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITN
        M  L NAFS+L               + +DA ++  S TGK+++ VN  G +  G             DYK PLVWIDLEMTGLNVE DRILEIACIITN
Subjt:  MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITN

Query:  GNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV
        G+LT+ VEGPDLV+ Q+K+CLDKM +WCQ+HH ASGLTKKVL S I+EREAE++VI+FVKKHV +    LAGNSVY+DF+FLKKYMP+LA LF H+LVDV
Subjt:  GNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFK
        SS+K LC RW+P +R+KAP K+N HRAMDDIRESI ELKYYK+ IFK
Subjt:  SSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFK

Arabidopsis top hitse value%identityAlignment
AT2G26970.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.6e-7961.54Show/hide
Query:  MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITN
        M  L NAFS+L               + +DA ++  S TGK+++ VN  G +  G             DYK PLVWIDLEMTGLNVE DRILEIACIITN
Subjt:  MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITN

Query:  GNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV
        G+LT+ VEGPDLV+ Q+K+CLDKM +WCQ+HH ASGLTKKVL S I+EREAE++VI+FVKKHV +    LAGNSVY+DF+FLKKYMP+LA LF H+LVDV
Subjt:  GNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFK
        SS+K LC RW+P +R+KAP K+N HRAMDDIRESI ELKYYK+ IFK
Subjt:  SSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFK

AT2G26970.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.5e-7760.32Show/hide
Query:  MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITN
        M  L NAFS+L     D+  P  S+SS +                 +++G +  G             DYK PLVWIDLEMTGLNVE DRILEIACIITN
Subjt:  MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITN

Query:  GNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV
        G+LT+ VEGPDLV+ Q+K+CLDKM +WCQ+HH ASGLTKKVL S I+EREAE++VI+FVKKHV +    LAGNSVY+DF+FLKKYMP+LA LF H+LVDV
Subjt:  GNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFK
        SS+K LC RW+P +R+KAP K+N HRAMDDIRESI ELKYYK+ IFK
Subjt:  SSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGAAACCACTTGTGAACGCGTTTTCATTGTTGGAGCTCGACGCTGAAGACGATCAAATTCCCGCTCTTTCTACTTCCTCCAAAGATGACGCTACTGTTTCTTA
CCCTTCACCAACAGGAAAAAGAAAGAAGGAAGTTAATATATCTGGTGATATTCTGACGGGAGAAAGACAGAAACAAGGTCAACCAAATGCAGTTGCAGAAGACTACAAGT
TTCCTCTTGTTTGGATTGACTTGGAAATGACTGGTTTAAATGTTGAAACAGATAGAATACTGGAGATAGCTTGTATTATTACCAATGGCAACCTGACCAAATTGGTTGAG
GGTCCTGATTTAGTGATTCACCAATCAAAAGAATGTCTAGATAAAATGGGAGAATGGTGTCAAAGTCATCATGCAGCCAGTGGATTGACAAAAAAAGTACTGCGAAGTAC
AATTAGTGAACGAGAAGCTGAAAAACAGGTTATACAATTTGTGAAGAAACATGTTTGTACCGATAAACTACACTTGGCTGGAAATTCAGTTTATATGGATTTTATTTTTT
TGAAGAAATACATGCCAGATTTGGCTGGACTTTTTTCGCATGTGCTCGTCGATGTCAGTAGTATAAAGACTCTTTGCGATCGCTGGTATCCAAGAGATCGGAAGAAAGCC
CCGCCAAAAGAGAATAAACACAGGGCTATGGATGATATCAGAGAAAGCATAATGGAACTCAAATATTACAAGGAAAATATATTTAAGAATTCAAAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
TTTTCCAATTAAGTGTAGACTGAAAATTGGATTTGACGGGGAAGGTGAAGTTGGTGGCGGCAAGACTTTGGGGGAGAGAGAGAGAGAGCGAGCGATGGCGATGAAACCAC
TTGTGAACGCGTTTTCATTGTTGGAGCTCGACGCTGAAGACGATCAAATTCCCGCTCTTTCTACTTCCTCCAAAGATGACGCTACTGTTTCTTACCCTTCACCAACAGGA
AAAAGAAAGAAGGAAGTTAATATATCTGGTGATATTCTGACGGGAGAAAGACAGAAACAAGGTCAACCAAATGCAGTTGCAGAAGACTACAAGTTTCCTCTTGTTTGGAT
TGACTTGGAAATGACTGGTTTAAATGTTGAAACAGATAGAATACTGGAGATAGCTTGTATTATTACCAATGGCAACCTGACCAAATTGGTTGAGGGTCCTGATTTAGTGA
TTCACCAATCAAAAGAATGTCTAGATAAAATGGGAGAATGGTGTCAAAGTCATCATGCAGCCAGTGGATTGACAAAAAAAGTACTGCGAAGTACAATTAGTGAACGAGAA
GCTGAAAAACAGGTTATACAATTTGTGAAGAAACATGTTTGTACCGATAAACTACACTTGGCTGGAAATTCAGTTTATATGGATTTTATTTTTTTGAAGAAATACATGCC
AGATTTGGCTGGACTTTTTTCGCATGTGCTCGTCGATGTCAGTAGTATAAAGACTCTTTGCGATCGCTGGTATCCAAGAGATCGGAAGAAAGCCCCGCCAAAAGAGAATA
AACACAGGGCTATGGATGATATCAGAGAAAGCATAATGGAACTCAAATATTACAAGGAAAATATATTTAAGAATTCAAAAAAGTGA
Protein sequenceShow/hide protein sequence
MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVE
GPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKA
PPKENKHRAMDDIRESIMELKYYKENIFKNSKK