; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G13170 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G13170
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr4:11316653..11317221
RNA-Seq ExpressionCSPI04G13170
SyntenyCSPI04G13170
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570356.1 hypothetical protein SDJN03_29271, partial [Cucurbita argyrosperma subsp. sororia]2.8e-5087.9Show/hide
Query:  MARYNYYYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAIL
        MARY YY+RYPYLEYLTLPPLQLCVF  ILL+VMAFSWY FY SFLED IFQLKLFLLTVPLLLLLLLHLLS G  FL+PLPEQ+SLHRAGGSPWGVAIL
Subjt:  MARYNYYYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAIL

Query:  LVFFLYVISHQSHYHQRWFPFGYR
        LVF LYVISHQSHYH+RWFPFGYR
Subjt:  LVFFLYVISHQSHYHQRWFPFGYR

XP_007014761.1 PREDICTED: uncharacterized protein LOC18589643 [Theobroma cacao]6.4e-3164.66Show/hide
Query:  YYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLY
        YYR  +L+YL+LPPL LC FV IL  V+ FSWY  Y S  EDFI QLK FL+  P++LLLL+H  S    FL+PLPEQDSLHR GGSPWGVA+LLVF LY
Subjt:  YYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLY

Query:  VISHQSHYHQRWFPFG
        +IS+QS +H+RWFP G
Subjt:  VISHQSHYHQRWFPFG

XP_012462541.1 PREDICTED: uncharacterized protein LOC105782384 [Gossypium raimondii]1.2e-2962.07Show/hide
Query:  YYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLY
        YYR  Y++YL+LPPL LC F+ IL  V+ FSWY  Y S LEDF+ QLK FL+  P++LLLLLH  S     L+P PE+DSLHRAGGSPWGVA++LV  LY
Subjt:  YYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLY

Query:  VISHQSHYHQRWFPFG
        +IS+QS++H+RWFPFG
Subjt:  VISHQSHYHQRWFPFG

XP_021278994.1 uncharacterized protein LOC110412707 [Herrania umbratica]1.4e-3064.66Show/hide
Query:  YYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLY
        YYR  +L+YL+LPPL LCVFV IL  V+ FSWY  Y S  EDFI QLK FL+  P++LLLL+H  S    FL+PLPEQDSLHRAGGSPWGVA++LVF LY
Subjt:  YYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLY

Query:  VISHQSHYHQRWFPFG
        +IS+QS + +RWFP G
Subjt:  VISHQSHYHQRWFPFG

XP_022756288.1 uncharacterized protein LOC111304026 [Durio zibethinus]4.9e-3164.91Show/hide
Query:  YYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLY
        YYRY +L+YL+ PP+ LC+FV IL  V+ FSWY  Y S  EDFI QLK FL+  PL+LL+L+H LS    FL+PLPEQDSLHRAGGSPWGVA++LVF LY
Subjt:  YYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLY

Query:  VISHQSHYHQRWFP
        +IS+QS +H+RWFP
Subjt:  VISHQSHYHQRWFP

TrEMBL top hitse value%identityAlignment
A0A061GR99 Uncharacterized protein3.1e-3164.66Show/hide
Query:  YYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLY
        YYR  +L+YL+LPPL LC FV IL  V+ FSWY  Y S  EDFI QLK FL+  P++LLLL+H  S    FL+PLPEQDSLHR GGSPWGVA+LLVF LY
Subjt:  YYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLY

Query:  VISHQSHYHQRWFPFG
        +IS+QS +H+RWFP G
Subjt:  VISHQSHYHQRWFPFG

A0A0A0KZ55 Uncharacterized protein1.1e-60100Show/hide
Query:  MARYNYYYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAIL
        MARYNYYYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAIL
Subjt:  MARYNYYYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAIL

Query:  LVFFLYVISHQSHYHQRWFPFGYR
        LVFFLYVISHQSHYHQRWFPFGYR
Subjt:  LVFFLYVISHQSHYHQRWFPFGYR

A0A5J5NVD3 Uncharacterized protein5.9e-3062.07Show/hide
Query:  YYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLY
        YYR  Y++YL+LPPL LC F+ IL  V+ FSWY  Y S LEDF+ QLK FL+  P++LLLLLH  S     L+P PE+DSLHRAGGSPWGVA++LV  LY
Subjt:  YYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLY

Query:  VISHQSHYHQRWFPFG
        +IS+QS++H+RWFPFG
Subjt:  VISHQSHYHQRWFPFG

A0A6J0ZX76 uncharacterized protein LOC1104127076.9e-3164.66Show/hide
Query:  YYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLY
        YYR  +L+YL+LPPL LCVFV IL  V+ FSWY  Y S  EDFI QLK FL+  P++LLLL+H  S    FL+PLPEQDSLHRAGGSPWGVA++LVF LY
Subjt:  YYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLY

Query:  VISHQSHYHQRWFPFG
        +IS+QS + +RWFP G
Subjt:  VISHQSHYHQRWFPFG

A0A6P5ZU06 uncharacterized protein LOC1113040262.4e-3164.91Show/hide
Query:  YYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLY
        YYRY +L+YL+ PP+ LC+FV IL  V+ FSWY  Y S  EDFI QLK FL+  PL+LL+L+H LS    FL+PLPEQDSLHRAGGSPWGVA++LVF LY
Subjt:  YYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLY

Query:  VISHQSHYHQRWFP
        +IS+QS +H+RWFP
Subjt:  VISHQSHYHQRWFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G31940.1 unknown protein5.5e-2049.53Show/hide
Query:  PLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFG------FSFLLPLPEQDSLHRAGGSPWGVAILLVFFLYVISHQSH
        PL LCVFV+ILL+ +  SWY  Y   +E F +Q KL L+  PLLLLL +H LS         + L+ L E++SL+RAGG+PWGVA +LVF  +++S+QS 
Subjt:  PLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFG------FSFLLPLPEQDSLHRAGGSPWGVAILLVFFLYVISHQSH

Query:  YHQRWFP
        + +RWFP
Subjt:  YHQRWFP

AT5G19875.1 unknown protein2.3e-2650.86Show/hide
Query:  YYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLY
        YY   YL+YL+LP   LC   +++  V++F+WY  + S +ED +  LKL  +  PL LLLL+H  S G SF +P PEQDS+HRAG SPWGVA +LV  L+
Subjt:  YYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLY

Query:  VISHQSHYHQRWFPFG
        ++S+QS + +RWFPFG
Subjt:  VISHQSHYHQRWFPFG

AT5G42146.1 unknown protein5.3e-0733.33Show/hide
Query:  PPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLL------HLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLYVISHQS
        PPL L   + I+ +++  S Y  Y   +E     LKLF+L +P+L + +L      H L F  S+ +   +  SL   G  PWGV ++L+  L ++S QS
Subjt:  PPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLL------HLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLYVISHQS

Query:  HYHQRWFP
        ++H  W+P
Subjt:  HYHQRWFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGGTACAACTACTACTACCGCTATCCTTACTTGGAGTACTTGACATTGCCTCCTTTGCAGCTTTGTGTGTTTGTTGTGATCCTTTTGGTGGTGATGGCCTTTTC
ATGGTACTTCTTCTACTATTCATTTCTTGAAGATTTTATCTTCCAACTCAAGCTCTTCCTTCTCACTGTCCCCTTGCTTCTCCTCCTCCTCCTCCACCTCCTCTCTTTCG
GCTTCTCCTTTCTCCTCCCTTTACCCGAGCAGGACTCCCTCCATCGTGCTGGTGGCTCACCCTGGGGCGTCGCCATCCTCCTCGTCTTCTTTCTCTATGTTATCTCTCAC
CAGTCTCATTACCACCAACGTTGGTTTCCTTTCGGATATAGATAA
mRNA sequenceShow/hide mRNA sequence
GAGAAAGTTGGAGTGGGAAAGAGAATGGCAAGGTACAACTACTACTACCGCTATCCTTACTTGGAGTACTTGACATTGCCTCCTTTGCAGCTTTGTGTGTTTGTTGTGAT
CCTTTTGGTGGTGATGGCCTTTTCATGGTACTTCTTCTACTATTCATTTCTTGAAGATTTTATCTTCCAACTCAAGCTCTTCCTTCTCACTGTCCCCTTGCTTCTCCTCC
TCCTCCTCCACCTCCTCTCTTTCGGCTTCTCCTTTCTCCTCCCTTTACCCGAGCAGGACTCCCTCCATCGTGCTGGTGGCTCACCCTGGGGCGTCGCCATCCTCCTCGTC
TTCTTTCTCTATGTTATCTCTCACCAGTCTCATTACCACCAACGTTGGTTTCCTTTCGGATATAGATAATGCTTATGTGATCGACGACGTACTAACTATTTGAATTGTAA
TTGAGTTGTACTAGATTACACTACTCTTTGGTTATTTTTGTATCATTTGTGTGTTGTCACTTGAATTGTTATGTTACAAATAACAACTTATTTGTTGTTTGTATCTATTG
TAAGTTTGTTTTTGTGGAG
Protein sequenceShow/hide protein sequence
MARYNYYYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLYVISH
QSHYHQRWFPFGYR