; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G13370 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G13370
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGATA transcription factor 29-like
Genome locationChr4:11420485..11421102
RNA-Seq ExpressionCSPI04G13370
SyntenyCSPI04G13370
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000679 - Zinc finger, GATA-type
IPR013088 - Zinc finger, NHR/GATA-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041360.1 GATA transcription factor 29-like [Cucumis melo var. makuwa]4.7e-8089.83Show/hide
Query:  NQVMANNQGLTRNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSY-PNTHQAKPIPTSTPNN-TPNLPLPKRGHNNDLYTLLNPASRVADD
        +Q+ ANNQGL RNNEMMSEPNY NPHQIVWSKDLKTYVLKS NN+G QLHPSSY   THQAKPI TSTPNN TPNLPLPK+GHNNDLYTLLNPASR++DD
Subjt:  NQVMANNQGLTRNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSY-PNTHQAKPIPTSTPNN-TPNLPLPKRGHNNDLYTLLNPASRVADD

Query:  HEAEASSAGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG
        HEAEASS GRRKGSRRRR SATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG
Subjt:  HEAEASSAGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG

KAE8649488.1 hypothetical protein Csa_017883, partial [Cucumis sativus]3.4e-78100Show/hide
Query:  VMANNQGLTRNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVADDHEAE
        VMANNQGLTRNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVADDHEAE
Subjt:  VMANNQGLTRNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVADDHEAE

Query:  ASSAGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPK
        ASSAGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPK
Subjt:  ASSAGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPK

KAG7010246.1 GATA transcription factor 29, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-6075.69Show/hide
Query:  NQVMA-NNQGL----TRNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRV
        +QVM  NN GL    +RN EMMSE NY NPHQIVWSK+LKTYVLKS NNFG QLHPS Y NT+ AK I  ST N+ PNLPL  + +NND YTLLNPA R 
Subjt:  NQVMA-NNQGL----TRNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRV

Query:  ADDHEAEASS-AGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG
         DDHEAEASS  GRR+G +RRRVSA N+VERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE MNKEAMAAEN++G
Subjt:  ADDHEAEASS-AGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG

XP_022985849.1 GATA zinc finger domain-containing protein 8-like [Cucurbita maxima]3.2e-6075Show/hide
Query:  NQVMA-NNQGLT----RNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRV
        +QVM  NN GL     RN EMMSE NY NPHQIVWSK+LKTYVLKS NNFG QLHPS Y NT+ AK +  ST N+T NLPL  + +NND YTLLNPA R 
Subjt:  NQVMA-NNQGLT----RNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRV

Query:  ADDHEAEASSAGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG
        ADDHEAEASS  RR+G +RRRVSA N+VERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE MNKEA+AAEN++G
Subjt:  ADDHEAEASSAGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG

XP_038902274.1 putative GATA transcription factor 22 [Benincasa hispida]2.0e-7081.56Show/hide
Query:  NQVMANNQGLT----RNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVA
        +QVM +N G      RN EMMSE NY NPHQIVWSK+LKTYVLKS N+FG QLHPSSY NTHQAKPI T TPNN+PNLPLPK  +NNDLYTLLNPASR+ 
Subjt:  NQVMANNQGLT----RNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVA

Query:  DDHEAEASSAGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG
        DDHEAEASS GRR+GSRRRRVSA ND ERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKET+N+EAMAAENS+G
Subjt:  DDHEAEASSAGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG

TrEMBL top hitse value%identityAlignment
A0A0A0L0J0 GATA-type domain-containing protein1.8e-96100Show/hide
Query:  MNQVMANNQGLTRNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVADDH
        MNQVMANNQGLTRNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVADDH
Subjt:  MNQVMANNQGLTRNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVADDH

Query:  EAEASSAGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG
        EAEASSAGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG
Subjt:  EAEASSAGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG

A0A5A7TDI3 GATA transcription factor 29-like2.3e-8089.83Show/hide
Query:  NQVMANNQGLTRNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSY-PNTHQAKPIPTSTPNN-TPNLPLPKRGHNNDLYTLLNPASRVADD
        +Q+ ANNQGL RNNEMMSEPNY NPHQIVWSKDLKTYVLKS NN+G QLHPSSY   THQAKPI TSTPNN TPNLPLPK+GHNNDLYTLLNPASR++DD
Subjt:  NQVMANNQGLTRNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSY-PNTHQAKPIPTSTPNN-TPNLPLPKRGHNNDLYTLLNPASRVADD

Query:  HEAEASSAGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG
        HEAEASS GRRKGSRRRR SATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG
Subjt:  HEAEASSAGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG

A0A6J1DIM0 GATA transcription factor 294.5e-4464.5Show/hide
Query:  NNQGLTRNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVADDHEAEASS
        NN GL  +   MSE NY NP+QI+WSK+LKTYVLKSNN      H     N         ST NN  N+PL  + ++NDLYTLLNPASR  DDHE E SS
Subjt:  NNQGLTRNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVADDHEAEASS

Query:  AGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSN
          RRK SR RRVS  ++ E+RCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE MN+EAM AENS+
Subjt:  AGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSN

A0A6J1FTP0 GATA zinc finger domain-containing protein 8-like1.7e-5975.14Show/hide
Query:  NQVMA-NNQGLT----RNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRV
        +QVM  NN GL     R+ EMMSE NY NPHQIVWSK+LKTYVLKS NNFG QLHPS Y NT+ AK I  ST N  PNLPL  + +NND YTLLNPA R 
Subjt:  NQVMA-NNQGLT----RNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRV

Query:  ADDHEAEASS-AGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG
         DDHEAEASS  GRR+G +RRRVSA N+VERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE MNKEAMAAEN++G
Subjt:  ADDHEAEASS-AGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG

A0A6J1JEF0 GATA zinc finger domain-containing protein 8-like1.5e-6075Show/hide
Query:  NQVMA-NNQGLT----RNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRV
        +QVM  NN GL     RN EMMSE NY NPHQIVWSK+LKTYVLKS NNFG QLHPS Y NT+ AK +  ST N+T NLPL  + +NND YTLLNPA R 
Subjt:  NQVMA-NNQGLT----RNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRV

Query:  ADDHEAEASSAGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG
        ADDHEAEASS  RR+G +RRRVSA N+VERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE MNKEA+AAEN++G
Subjt:  ADDHEAEASSAGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG

SwissProt top hitse value%identityAlignment
B8AX51 GATA transcription factor 154.1e-1038.94Show/hide
Query:  PNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVADDHEAEASSAGRR----KGSRRRRVSATND--VERRCTNYNCNTNFTPMWRKGPLGPK
        P++ +A+P+  + P      P+P        Y  L+ A+ V+ D  AE+   G++     G+ +    A +D  ++RRC   NC T  TP+WR GP GPK
Subjt:  PNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVADDHEAEASSAGRR----KGSRRRRVSATND--VERRCTNYNCNTNFTPMWRKGPLGPK

Query:  SLCNACGIRYRKE
        SLCNACGIRY+KE
Subjt:  SLCNACGIRYRKE

Q6L5E5 GATA transcription factor 154.1e-1038.94Show/hide
Query:  PNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVADDHEAEASSAGRR----KGSRRRRVSATND--VERRCTNYNCNTNFTPMWRKGPLGPK
        P++ +A+P+  + P      P+P        Y  L+ A+ V+ D  AE+   G++     G+ +    A +D  ++RRC   NC T  TP+WR GP GPK
Subjt:  PNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVADDHEAEASSAGRR----KGSRRRRVSATND--VERRCTNYNCNTNFTPMWRKGPLGPK

Query:  SLCNACGIRYRKE
        SLCNACGIRY+KE
Subjt:  SLCNACGIRYRKE

Q6QPM2 GATA transcription factor 191.2e-0958.49Show/hide
Query:  NDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENS
        N + RRC   NC+T  TP+WR GP GPKSLCNACGIR++KE   + A  A NS
Subjt:  NDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENS

Q9LT45 GATA transcription factor 291.7e-1129.65Show/hide
Query:  QVMANNQGLTRNNEMM-SEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVADDHE
        +V+ + +GL  ++E++ +EP  NN   + ++  +  YV +        L+ + YP      P P + P              +D Y L++  +R A  + 
Subjt:  QVMANNQGLTRNNEMM-SEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVADDHE

Query:  AEASSAGRRKGSRRRRVSATN-------DVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNK
        +   +   ++ +  +R+           +  ++CTN NCN   TPMWR+GPLGPKSLCNACGI++RKE   K
Subjt:  AEASSAGRRKGSRRRRVSATN-------DVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNK

Q9ZPX0 GATA transcription factor 202.7e-0936Show/hide
Query:  TLLNPASRVADDHEAEASSA-----------GRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG
        +L  P++R+ D H   ++++           G  K S  ++    + + RRC   +C+T  TP+WR GP GPKSLCNACGIR++KE     A     S G
Subjt:  TLLNPASRVADDHEAEASSA-----------GRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG

Arabidopsis top hitse value%identityAlignment
AT2G18380.1 GATA transcription factor 201.9e-1036Show/hide
Query:  TLLNPASRVADDHEAEASSA-----------GRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG
        +L  P++R+ D H   ++++           G  K S  ++    + + RRC   +C+T  TP+WR GP GPKSLCNACGIR++KE     A     S G
Subjt:  TLLNPASRVADDHEAEASSA-----------GRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG

AT3G16870.1 GATA transcription factor 175.5e-1040Show/hide
Query:  NNDLYTLLNPASRVADDHEAEASSAGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAE
        + D  T L+ A  ++D      SS+G   G      S++ D +R C   +C T  TP+WR GP GPKSLCNACGI+ RK+      M +E
Subjt:  NNDLYTLLNPASRVADDHEAEASSAGRRKGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAE

AT3G20750.1 GATA transcription factor 291.2e-1229.65Show/hide
Query:  QVMANNQGLTRNNEMM-SEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVADDHE
        +V+ + +GL  ++E++ +EP  NN   + ++  +  YV +        L+ + YP      P P + P              +D Y L++  +R A  + 
Subjt:  QVMANNQGLTRNNEMM-SEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVADDHE

Query:  AEASSAGRRKGSRRRRVSATN-------DVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNK
        +   +   ++ +  +R+           +  ++CTN NCN   TPMWR+GPLGPKSLCNACGI++RKE   K
Subjt:  AEASSAGRRKGSRRRRVSATN-------DVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNK

AT3G50870.1 GATA type zinc finger transcription factor family protein5.5e-1070.27Show/hide
Query:  RRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE
        RRC   NC+T  TP+WR GP GPKSLCNACGIR++KE
Subjt:  RRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE

AT4G36620.1 GATA transcription factor 198.5e-1158.49Show/hide
Query:  NDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENS
        N + RRC   NC+T  TP+WR GP GPKSLCNACGIR++KE   + A  A NS
Subjt:  NDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCAGGTGATGGCGAACAATCAAGGGTTAACCAGAAATAATGAAATGATGAGTGAACCAAATTACAATAACCCTCACCAAATTGTATGGTCAAAAGATCTAAAAAC
CTATGTTCTTAAGTCAAATAATAATTTTGGGCAGCAGCTTCATCCAAGTTCATACCCTAATACTCATCAAGCAAAGCCCATACCCACCAGTACTCCAAATAACACCCCAA
ATCTTCCTCTTCCAAAACGAGGACACAATAATGACCTATACACACTCCTCAACCCTGCTTCTAGAGTAGCAGATGATCATGAAGCCGAAGCTTCCTCCGCTGGTCGGCGA
AAAGGGTCTCGACGACGTCGAGTTTCAGCCACCAATGATGTCGAGAGAAGGTGTACCAATTACAATTGCAACACCAACTTCACACCCATGTGGCGTAAAGGTCCTCTTGG
TCCTAAGAGCCTTTGCAATGCATGTGGAATAAGGTATAGAAAAGAGACTATGAACAAAGAAGCAATGGCAGCAGAAAACAGCAACGGG
mRNA sequenceShow/hide mRNA sequence
ATGAATCAGGTGATGGCGAACAATCAAGGGTTAACCAGAAATAATGAAATGATGAGTGAACCAAATTACAATAACCCTCACCAAATTGTATGGTCAAAAGATCTAAAAAC
CTATGTTCTTAAGTCAAATAATAATTTTGGGCAGCAGCTTCATCCAAGTTCATACCCTAATACTCATCAAGCAAAGCCCATACCCACCAGTACTCCAAATAACACCCCAA
ATCTTCCTCTTCCAAAACGAGGACACAATAATGACCTATACACACTCCTCAACCCTGCTTCTAGAGTAGCAGATGATCATGAAGCCGAAGCTTCCTCCGCTGGTCGGCGA
AAAGGGTCTCGACGACGTCGAGTTTCAGCCACCAATGATGTCGAGAGAAGGTGTACCAATTACAATTGCAACACCAACTTCACACCCATGTGGCGTAAAGGTCCTCTTGG
TCCTAAGAGCCTTTGCAATGCATGTGGAATAAGGTATAGAAAAGAGACTATGAACAAAGAAGCAATGGCAGCAGAAAACAGCAACGGG
Protein sequenceShow/hide protein sequence
MNQVMANNQGLTRNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVADDHEAEASSAGRR
KGSRRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG