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CSPI04G14160 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G14160
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr4:11979166..11979866
RNA-Seq ExpressionCSPI04G14160
SyntenyCSPI04G14160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047323.1 hypothetical protein E6C27_scaffold908G001440 [Cucumis melo var. makuwa]3.5e-8293.67Show/hide
Query:  MSDMIYNGSDSIGLLMLNAN--GYDIPEFGFMSQHQSDGDPIGDNPESEQTYHSCYGWSSNEVDPTDLFFNCEYLYGNQNGCINESTTELILYQNENQLE
        MSDMIYNGSDSIGLLMLNAN   Y I EFGFMSQHQSDGDPIGDNPESEQTYHSCYGW SNEV+PTDLFFNCEY YGNQNGCINESTTELILYQNENQLE
Subjt:  MSDMIYNGSDSIGLLMLNAN--GYDIPEFGFMSQHQSDGDPIGDNPESEQTYHSCYGWSSNEVDPTDLFFNCEYLYGNQNGCINESTTELILYQNENQLE

Query:  DYNGDSRNLYYEFSWDCLRFWFGIGEDEQGQERNGQELTPENDCRSDALALLEAILGY
        DYNGDSRNLYYEFSWDCLRFWFG+GE+EQGQERNGQELTPENDCRSDALALLEAILGY
Subjt:  DYNGDSRNLYYEFSWDCLRFWFGIGEDEQGQERNGQELTPENDCRSDALALLEAILGY

KAG6595286.1 hypothetical protein SDJN03_11839, partial [Cucurbita argyrosperma subsp. sororia]1.9e-4058.86Show/hide
Query:  NGSDSIGLLMLNANGYDIPE-------FGFMSQHQ-SDGDPIGDNPESEQTYHSCYGWSSNEVDPTDLFFNCEYLYGNQNGCINESTTELILYQNENQLE
        +GS+SIGLLM NAN YD P         GF  QHQ SDGDPI D+PE ++T  SC+  S NE+D +DL FN +  Y NQ+GC  E+  ELIL+ NE+Q E
Subjt:  NGSDSIGLLMLNANGYDIPE-------FGFMSQHQ-SDGDPIGDNPESEQTYHSCYGWSSNEVDPTDLFFNCEYLYGNQNGCINESTTELILYQNENQLE

Query:  DYNGDSRNLYYEFSWDCLRFWFGIGEDEQGQERNGQELTPENDCRSDALALLEAILGY
        DY GD RNLYYEF W C R+WFG+GEDE  Q+ NGQEL  E DC S+A+ALLE+ILGY
Subjt:  DYNGDSRNLYYEFSWDCLRFWFGIGEDEQGQERNGQELTPENDCRSDALALLEAILGY

KGN54204.1 hypothetical protein Csa_017990 [Cucumis sativus]2.1e-8798.72Show/hide
Query:  MSDMIYNGSDSIGLLMLNANGYDIPEFGFMSQHQSDGDPIGDNPESEQTYHSCYGWSSNEVDPTDLFFNCEYLYGNQNGCINESTTELILYQNENQLEDY
        MSDMIYNGSDSIGLLMLNANGYDIPEFGFMSQHQSDGDPIGDNPESEQ YHSCYGWSSNEV+PTDLFFNCEYLYGNQNGCINESTTELILYQNENQLEDY
Subjt:  MSDMIYNGSDSIGLLMLNANGYDIPEFGFMSQHQSDGDPIGDNPESEQTYHSCYGWSSNEVDPTDLFFNCEYLYGNQNGCINESTTELILYQNENQLEDY

Query:  NGDSRNLYYEFSWDCLRFWFGIGEDEQGQERNGQELTPENDCRSDALALLEAILGY
        NGDSRNLYYEFSWDCLRFWFGIGEDEQGQERNGQELTPENDCRSDALALLEAILGY
Subjt:  NGDSRNLYYEFSWDCLRFWFGIGEDEQGQERNGQELTPENDCRSDALALLEAILGY

TrEMBL top hitse value%identityAlignment
A0A0A0KZF2 Uncharacterized protein1.0e-8798.72Show/hide
Query:  MSDMIYNGSDSIGLLMLNANGYDIPEFGFMSQHQSDGDPIGDNPESEQTYHSCYGWSSNEVDPTDLFFNCEYLYGNQNGCINESTTELILYQNENQLEDY
        MSDMIYNGSDSIGLLMLNANGYDIPEFGFMSQHQSDGDPIGDNPESEQ YHSCYGWSSNEV+PTDLFFNCEYLYGNQNGCINESTTELILYQNENQLEDY
Subjt:  MSDMIYNGSDSIGLLMLNANGYDIPEFGFMSQHQSDGDPIGDNPESEQTYHSCYGWSSNEVDPTDLFFNCEYLYGNQNGCINESTTELILYQNENQLEDY

Query:  NGDSRNLYYEFSWDCLRFWFGIGEDEQGQERNGQELTPENDCRSDALALLEAILGY
        NGDSRNLYYEFSWDCLRFWFGIGEDEQGQERNGQELTPENDCRSDALALLEAILGY
Subjt:  NGDSRNLYYEFSWDCLRFWFGIGEDEQGQERNGQELTPENDCRSDALALLEAILGY

A0A5A7TUT5 Uncharacterized protein1.7e-8293.67Show/hide
Query:  MSDMIYNGSDSIGLLMLNAN--GYDIPEFGFMSQHQSDGDPIGDNPESEQTYHSCYGWSSNEVDPTDLFFNCEYLYGNQNGCINESTTELILYQNENQLE
        MSDMIYNGSDSIGLLMLNAN   Y I EFGFMSQHQSDGDPIGDNPESEQTYHSCYGW SNEV+PTDLFFNCEY YGNQNGCINESTTELILYQNENQLE
Subjt:  MSDMIYNGSDSIGLLMLNAN--GYDIPEFGFMSQHQSDGDPIGDNPESEQTYHSCYGWSSNEVDPTDLFFNCEYLYGNQNGCINESTTELILYQNENQLE

Query:  DYNGDSRNLYYEFSWDCLRFWFGIGEDEQGQERNGQELTPENDCRSDALALLEAILGY
        DYNGDSRNLYYEFSWDCLRFWFG+GE+EQGQERNGQELTPENDCRSDALALLEAILGY
Subjt:  DYNGDSRNLYYEFSWDCLRFWFGIGEDEQGQERNGQELTPENDCRSDALALLEAILGY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGATATGATTTACAATGGCTCCGACTCCATTGGGCTGCTCATGCTAAATGCAAACGGCTATGACATACCGGAGTTCGGTTTCATGAGCCAACACCAGTCTGATGG
AGACCCAATTGGAGACAACCCTGAGAGTGAACAGACTTACCACAGTTGTTATGGATGGTCGTCGAATGAAGTCGACCCCACCGATCTCTTCTTCAATTGCGAATACCTTT
ATGGCAATCAAAATGGTTGCATAAACGAGAGTACAACAGAACTCATTCTTTACCAGAATGAGAATCAACTTGAGGATTATAATGGTGATTCTAGAAACTTGTACTATGAA
TTTTCTTGGGATTGCCTTCGGTTTTGGTTTGGAATTGGGGAAGATGAGCAAGGTCAGGAACGTAATGGGCAAGAATTGACACCTGAAAATGACTGCAGATCAGATGCTTT
GGCACTCCTAGAAGCCATCCTTGGGTATTGA
mRNA sequenceShow/hide mRNA sequence
AATATGGTTCTCTTTTTTCTCCTTTCCAAGTTTATATATAACAGGTAATCTAAGAGCATACCCATTGTCATAGTGTGGCCTTGTCAGAGCTTTGAATGTCAGATATGATT
TACAATGGCTCCGACTCCATTGGGCTGCTCATGCTAAATGCAAACGGCTATGACATACCGGAGTTCGGTTTCATGAGCCAACACCAGTCTGATGGAGACCCAATTGGAGA
CAACCCTGAGAGTGAACAGACTTACCACAGTTGTTATGGATGGTCGTCGAATGAAGTCGACCCCACCGATCTCTTCTTCAATTGCGAATACCTTTATGGCAATCAAAATG
GTTGCATAAACGAGAGTACAACAGAACTCATTCTTTACCAGAATGAGAATCAACTTGAGGATTATAATGGTGATTCTAGAAACTTGTACTATGAATTTTCTTGGGATTGC
CTTCGGTTTTGGTTTGGAATTGGGGAAGATGAGCAAGGTCAGGAACGTAATGGGCAAGAATTGACACCTGAAAATGACTGCAGATCAGATGCTTTGGCACTCCTAGAAGC
CATCCTTGGGTATTGACACTGCCATATCATTTTTTACTTTTCATCAAGAATGCAATGTAATCAGAGTTCTTTATTTCTTTTCAAATGTTCTTTTACCAGAAATAATAACA
AGTTTTCCCGATTTTATTATATCAAAGTATACAAAATCCAG
Protein sequenceShow/hide protein sequence
MSDMIYNGSDSIGLLMLNANGYDIPEFGFMSQHQSDGDPIGDNPESEQTYHSCYGWSSNEVDPTDLFFNCEYLYGNQNGCINESTTELILYQNENQLEDYNGDSRNLYYE
FSWDCLRFWFGIGEDEQGQERNGQELTPENDCRSDALALLEAILGY