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CSPI04G14790 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G14790
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like
Genome locationChr4:12395120..12397203
RNA-Seq ExpressionCSPI04G14790
SyntenyCSPI04G14790
Gene Ontology termsGO:0009639 - response to red or far red light (biological process)
GO:0051457 - maintenance of protein location in nucleus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR037766 - Protein FAR-RED ELONGATED HYPOCOTYL 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603645.1 Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein, partial [Cucurbita argyrosperma subsp. sororia]4.0e-5257.08Show/hide
Query:  MDQ-NNRHHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGP--RSISIPHGEDNFKFNDQPQEEEQEEGEG
        MDQ N+  HHPSH  T                   G Q W+TE+ DVK KR+LL +QLSLPT KLP WGP   SIS P+GED+FKFN   ++  +EEG  
Subjt:  MDQ-NNRHHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGP--RSISIPHGEDNFKFNDQPQEEEQEEGEG

Query:  EGGEGGEGEGEESTLTKIAIDEGKEMSEEQVRMQGG----KDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSVDTET
                   ES+LTK+A  EGK+MS E+VR+QG     KDKL  +YGHEEDLLEFGS     IYE+CCS S QNLLLPTDSK +FVLSSGRWS+D E 
Subjt:  EGGEGGEGEGEESTLTKIAIDEGKEMSEEQVRMQGG----KDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSVDTET

Query:  VSKPIKPTIDQEFEQYFSVLLPSLDP
         SK I PTIDQEFEQYFS +LPSLDP
Subjt:  VSKPIKPTIDQEFEQYFSVLLPSLDP

KAG7033829.1 hypothetical protein SDJN02_03554, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-5156.64Show/hide
Query:  MDQ-NNRHHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGP--RSISIPHGEDNFKFNDQPQEEEQEEGEG
        MDQ N+  HHPSH  T                   G Q W+TE+ DVK KR+LL +QLSLPT KLP WGP   SIS P+GED+ KFN   ++  +EEG  
Subjt:  MDQ-NNRHHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGP--RSISIPHGEDNFKFNDQPQEEEQEEGEG

Query:  EGGEGGEGEGEESTLTKIAIDEGKEMSEEQVRMQGG----KDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSVDTET
                   ES+LTK+A  EGK+MS E+VR+QG     KDKL  +YGHEEDLLEFGS     IYE+CCS S QNLLLPTDSK +FVLSSGRWS+D E 
Subjt:  EGGEGGEGEGEESTLTKIAIDEGKEMSEEQVRMQGG----KDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSVDTET

Query:  VSKPIKPTIDQEFEQYFSVLLPSLDP
         SK I PTIDQEFEQYFS +LPSLDP
Subjt:  VSKPIKPTIDQEFEQYFSVLLPSLDP

XP_008448098.1 PREDICTED: uncharacterized protein LOC103490381 [Cucumis melo]4.1e-8979Show/hide
Query:  MDQNNRHHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGPRSISIPHGEDNFKFNDQPQEEEQEEGEGEGG
        MDQNN+HHHPS FDTDRIIN PTS+DFET SR HG QSWNTEA+DVK KRRLLIDQLSLPTSKLP WG RSISIPHGEDNFKFN +P+            
Subjt:  MDQNNRHHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGPRSISIPHGEDNFKFNDQPQEEEQEEGEGEGG

Query:  EGGEGEGEESTLTKIAIDEGKEMSEEQVRMQGGKDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSVDTETVSKPIKP
             EGE STLTKI I +GKEMSEEQVRMQG KDKLQKSYGHEEDLLEFG+  + CIYEECCSGSAQ+LLLPTDSKQNFVLSSGRWSVD+ET SK +KP
Subjt:  EGGEGEGEESTLTKIAIDEGKEMSEEQVRMQGGKDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSVDTETVSKPIKP

Query:  TIDQEFEQYFSVLLPSLDP
        TIDQEFEQYFSVLLPSLDP
Subjt:  TIDQEFEQYFSVLLPSLDP

XP_011653642.1 uncharacterized protein LOC105435241 [Cucumis sativus]1.5e-11597.26Show/hide
Query:  MDQNNRHHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGPRSISIPHGEDNFKFNDQPQEEEQEEGEGEGG
        MDQNNRHHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGPRSISIPHGEDNFKFNDQPQEEEQEEGE   G
Subjt:  MDQNNRHHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGPRSISIPHGEDNFKFNDQPQEEEQEEGEGEGG

Query:  EGGEGEGEESTLTKIAIDEGKEMSEEQVRMQGGKDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSVDTETVSKPIKP
        EGGEGEGEESTLTKIAID+ KEMSEEQVRMQGGKDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSVDTET SKPIKP
Subjt:  EGGEGEGEESTLTKIAIDEGKEMSEEQVRMQGGKDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSVDTETVSKPIKP

Query:  TIDQEFEQYFSVLLPSLDP
        TIDQEFEQYFSVLLPSLDP
Subjt:  TIDQEFEQYFSVLLPSLDP

XP_038883311.1 protein FAR-RED ELONGATED HYPOCOTYL 1-like [Benincasa hispida]6.8e-6867.73Show/hide
Query:  MDQNNRHHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGPRSISIPHGEDNFKFNDQPQEEEQEEGEGEGG
        M+Q N+HHHPSH DTD      +S  F         Q WNTE +DVK KRRLLIDQLSLPTSKLP WGP SISIPHG DNFKF+ + QEEE         
Subjt:  MDQNNRHHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGPRSISIPHGEDNFKFNDQPQEEEQEEGEGEGG

Query:  EGGEGEGEESTLTKIAIDEGKEMSEEQVRMQGGKDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQN-LLLPTDSKQNFVLSSGRWSVDTETVSKPIK
             EGEEST T+IAI EGKE S+EQV+MQG KDKLQ+SYGHEEDLLEFGS  + CIYE+CCS SAQ+ LLLPT+SK +FVLSSGRWSVD E  SK IK
Subjt:  EGGEGEGEESTLTKIAIDEGKEMSEEQVRMQGGKDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQN-LLLPTDSKQNFVLSSGRWSVDTETVSKPIK

Query:  PTIDQEFEQYFSVLLPSLDP
        PTIDQEFEQYFSV LPSLDP
Subjt:  PTIDQEFEQYFSVLLPSLDP

TrEMBL top hitse value%identityAlignment
A0A0A0KZL8 Uncharacterized protein7.2e-11697.26Show/hide
Query:  MDQNNRHHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGPRSISIPHGEDNFKFNDQPQEEEQEEGEGEGG
        MDQNNRHHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGPRSISIPHGEDNFKFNDQPQEEEQEEGE   G
Subjt:  MDQNNRHHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGPRSISIPHGEDNFKFNDQPQEEEQEEGEGEGG

Query:  EGGEGEGEESTLTKIAIDEGKEMSEEQVRMQGGKDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSVDTETVSKPIKP
        EGGEGEGEESTLTKIAID+ KEMSEEQVRMQGGKDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSVDTET SKPIKP
Subjt:  EGGEGEGEESTLTKIAIDEGKEMSEEQVRMQGGKDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSVDTETVSKPIKP

Query:  TIDQEFEQYFSVLLPSLDP
        TIDQEFEQYFSVLLPSLDP
Subjt:  TIDQEFEQYFSVLLPSLDP

A0A1S3BJU4 uncharacterized protein LOC1034903812.0e-8979Show/hide
Query:  MDQNNRHHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGPRSISIPHGEDNFKFNDQPQEEEQEEGEGEGG
        MDQNN+HHHPS FDTDRIIN PTS+DFET SR HG QSWNTEA+DVK KRRLLIDQLSLPTSKLP WG RSISIPHGEDNFKFN +P+            
Subjt:  MDQNNRHHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGPRSISIPHGEDNFKFNDQPQEEEQEEGEGEGG

Query:  EGGEGEGEESTLTKIAIDEGKEMSEEQVRMQGGKDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSVDTETVSKPIKP
             EGE STLTKI I +GKEMSEEQVRMQG KDKLQKSYGHEEDLLEFG+  + CIYEECCSGSAQ+LLLPTDSKQNFVLSSGRWSVD+ET SK +KP
Subjt:  EGGEGEGEESTLTKIAIDEGKEMSEEQVRMQGGKDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSVDTETVSKPIKP

Query:  TIDQEFEQYFSVLLPSLDP
        TIDQEFEQYFSVLLPSLDP
Subjt:  TIDQEFEQYFSVLLPSLDP

A0A6J1CPJ7 uncharacterized protein LOC1110135566.5e-3249.06Show/hide
Query:  HHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLI--DQLSLPTSKLPRWGPR-SISIPHGEDNFKFNDQPQEEEQEEGEGEGGEGGE
        HHPSH  TD                  G Q WNT   DVK KR+LLI  +QLS PT KLPRWGP  S+S P+G  NFKFN  PQ++ +E           
Subjt:  HHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLI--DQLSLPTSKLPRWGPR-SISIPHGEDNFKFNDQPQEEEQEEGEGEGGEGGE

Query:  GEGEESTLTKIAIDEGKEMSEEQVRMQGGKDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSVD--TETVSKPIKPTI
           EE  LTK A+ E KE+S+ +  M+ G   L  SYGH EDLLEFGS +     EEC            DSK +FVLSSGRW+VD  +E  SK +KPTI
Subjt:  GEGEESTLTKIAIDEGKEMSEEQVRMQGGKDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSVD--TETVSKPIKPTI

Query:  DQEFEQYFSVLL
        DQEFEQYFSVLL
Subjt:  DQEFEQYFSVLL

A0A6J1GGJ6 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like3.4e-4956.19Show/hide
Query:  MDQNNR-HHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGP--RSISIPHGEDNFKFNDQPQEEEQEEGEG
        MDQ N   HHPSH  T       +  DF         Q W+TE+ DVK KR+LL +QLSLPT KLP WGP   SIS P+GED+FKFN    ++  +EG  
Subjt:  MDQNNR-HHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGP--RSISIPHGEDNFKFNDQPQEEEQEEGEG

Query:  EGGEGGEGEGEESTLTKIAIDEGKEMSEEQVRMQGG----KDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSVDTET
                   ES+LTK+A  EGK+MS E+VR+QG     KDKL  +YGHEEDLLEFGS     IYE  CS S QNLLLPTDS  +FVLSSGRWS+D E 
Subjt:  EGGEGGEGEGEESTLTKIAIDEGKEMSEEQVRMQGG----KDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSVDTET

Query:  VSKPIKPTIDQEFEQYFSVLLPSLDP
         SK I PTIDQEFEQYFS +LPSLDP
Subjt:  VSKPIKPTIDQEFEQYFSVLLPSLDP

A0A6J1IMA5 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like9.3e-4753.74Show/hide
Query:  MDQNNR-HHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGP--RSISIPHGEDNFKFNDQPQEEEQEEGEG
        MDQ N   HHPSH  T                   G Q W+TE+ DVK KR+LL +QLSLPT KLP WGP   SIS P+GED+FKFN   ++  +EEG  
Subjt:  MDQNNR-HHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGP--RSISIPHGEDNFKFNDQPQEEEQEEGEG

Query:  EGGEGGEGEGEESTLTKIAIDEGKEMSEEQVRMQGG----KDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQN-FVLSSGRWSVDTE
                   ES+LTK+A       S E+VR+QG     KDKL  +YGHEEDLLEFGS     IYE+CCS S QNLLLPTDS  + FVLSSGRWS+D E
Subjt:  EGGEGGEGEGEESTLTKIAIDEGKEMSEEQVRMQGG----KDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQN-FVLSSGRWSVDTE

Query:  TVSKPIKPTIDQEFEQYFSVLLPSLDP
          SK + P IDQEFEQYFS +LPSLDP
Subjt:  TVSKPIKPTIDQEFEQYFSVLLPSLDP

SwissProt top hitse value%identityAlignment
A8MR65 Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE1.7e-0541.67Show/hide
Query:  EEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSV-DTETVSKPIKPTIDQEFEQYFSVLL
        +ED  +F   E+     E      Q +L P +S   ++LSS RWSV + ++     KPTIDQEFEQYFS L+
Subjt:  EEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSV-DTETVSKPIKPTIDQEFEQYFSVLL

Q8S4Q6 Protein FAR-RED ELONGATED HYPOCOTYL 11.7e-0567.57Show/hide
Query:  FVLSSGRWSV--DTETVSKPIKPTIDQEFEQYFSVLL
        FVLSSGRW+V  D  T+ +  KPTIDQEFEQYFS L+
Subjt:  FVLSSGRWSV--DTETVSKPIKPTIDQEFEQYFSVLL

Arabidopsis top hitse value%identityAlignment
AT2G37678.1 far-red elongated hypocotyl 11.2e-0667.57Show/hide
Query:  FVLSSGRWSV--DTETVSKPIKPTIDQEFEQYFSVLL
        FVLSSGRW+V  D  T+ +  KPTIDQEFEQYFS L+
Subjt:  FVLSSGRWSV--DTETVSKPIKPTIDQEFEQYFSVLL

AT5G02200.1 far-red-elongated hypocotyl1-like1.2e-0641.67Show/hide
Query:  EEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSV-DTETVSKPIKPTIDQEFEQYFSVLL
        +ED  +F   E+     E      Q +L P +S   ++LSS RWSV + ++     KPTIDQEFEQYFS L+
Subjt:  EEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSV-DTETVSKPIKPTIDQEFEQYFSVLL

AT5G02200.2 far-red-elongated hypocotyl1-like1.2e-0641.67Show/hide
Query:  EEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSV-DTETVSKPIKPTIDQEFEQYFSVLL
        +ED  +F   E+     E      Q +L P +S   ++LSS RWSV + ++     KPTIDQEFEQYFS L+
Subjt:  EEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSV-DTETVSKPIKPTIDQEFEQYFSVLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCAAAACAACCGACATCATCATCCATCTCACTTTGACACTGACAGAATCATTAACAGACCAACATCAGTGGACTTTGAAACTCCGTCCAGACTCCATGGCTGTCA
ATCATGGAATACAGAAGCCGTTGATGTTAAAAACAAAAGAAGGCTGCTAATTGATCAACTAAGTCTACCCACATCAAAGCTACCACGTTGGGGTCCAAGATCAATTAGCA
TTCCCCATGGAGAAGATAACTTCAAGTTTAACGACCAACCTCAAGAAGAAGAACAAGAAGAAGGAGAAGGAGAAGGAGGAGAAGGAGGAGAAGGAGAAGGAGAAGAAAGC
ACTCTTACAAAAATTGCAATAGACGAAGGTAAAGAGATGTCCGAAGAGCAAGTTCGAATGCAGGGTGGGAAAGATAAATTGCAGAAAAGCTATGGCCATGAGGAAGATCT
ATTGGAGTTTGGAAGCCGTGAATATGGCTGCATTTATGAGGAATGTTGCAGTGGCAGTGCTCAAAACTTGCTCCTCCCCACAGACTCCAAGCAAAACTTCGTTTTGTCAT
CTGGGAGATGGAGCGTAGATACAGAGACAGTATCCAAGCCTATCAAACCAACCATTGATCAAGAGTTTGAGCAGTACTTTTCTGTGCTTTTGCCATCCTTGGATCCCTGA
mRNA sequenceShow/hide mRNA sequence
GATAAATACGAGGCATAAACAAATACTATAATTAAAATATTCTCAAAGTCCTCAAATCCAATCTCTCCTTCCCAACCTTTTCACTTTCTTTTATTCATCAACACGAACGA
AACATATAGTTTGGTTGGCTTCCTGCCATTTTCTTCTCTCTTTCTTCACCATTGTCAATTGATAATGGACCAAAACAACCGACATCATCATCCATCTCACTTTGACACTG
ACAGAATCATTAACAGACCAACATCAGTGGACTTTGAAACTCCGTCCAGACTCCATGGCTGTCAATCATGGAATACAGAAGCCGTTGATGTTAAAAACAAAAGAAGGCTG
CTAATTGATCAACTAAGTCTACCCACATCAAAGCTACCACGTTGGGGTCCAAGATCAATTAGCATTCCCCATGGAGAAGATAACTTCAAGTTTAACGACCAACCTCAAGA
AGAAGAACAAGAAGAAGGAGAAGGAGAAGGAGGAGAAGGAGGAGAAGGAGAAGGAGAAGAAAGCACTCTTACAAAAATTGCAATAGACGAAGGTAAAGAGATGTCCGAAG
AGCAAGTTCGAATGCAGGGTGGGAAAGATAAATTGCAGAAAAGCTATGGCCATGAGGAAGATCTATTGGAGTTTGGAAGCCGTGAATATGGCTGCATTTATGAGGAATGT
TGCAGTGGCAGTGCTCAAAACTTGCTCCTCCCCACAGACTCCAAGCAAAACTTCGTTTTGTCATCTGGGAGATGGAGCGTAGATACAGAGACAGTATCCAAGCCTATCAA
ACCAACCATTGATCAAGAGTTTGAGCAGTACTTTTCTGTGCTTTTGCCATCCTTGGATCCCTGATGTTGAACATCTTGAATCCGATCTGTATCTACTCTCGAGAAATTTA
AATGTGTTCTTAGAGATGAAACAGTTCTTGCAAGTATGCGACAATTCAATCCAAGAGATGTCTGTGAATGTGAAATGAAGTGATTGAGATTCTACCGAACCAGTCCACGA
AATTCAACTGATTTCAATCCAATTATTCCGTCC
Protein sequenceShow/hide protein sequence
MDQNNRHHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGPRSISIPHGEDNFKFNDQPQEEEQEEGEGEGGEGGEGEGEES
TLTKIAIDEGKEMSEEQVRMQGGKDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSVDTETVSKPIKPTIDQEFEQYFSVLLPSLDP