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CSPI04G14880 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G14880
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform B
Genome locationChr4:12454427..12454648
RNA-Seq ExpressionCSPI04G14880
SyntenyCSPI04G14880
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003425 - CCB3/YggT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067975.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3 [Cucumis melo var. makuwa]5.3e-2592.75Show/hide
Query:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPL
        MTLADLDP TAKL I+FLGPSLSVFSFLFIARIVMSWYPKL VGKFPYVIAYAP EPLLIATRKVIPPL
Subjt:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPL
TYK18148.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3 [Cucumis melo var. makuwa]5.3e-2592.75Show/hide
Query:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPL
        MTLADLDP TAKL I+FLGPSLSVFSFLFIARIVMSWYPKL VGKFPYVIAYAP EPLLIATRKVIPPL
Subjt:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPL
XP_004136016.2 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X1 [Cucumis sativus]7.0e-2591.3Show/hide
Query:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPL
        MTLADLDP TAKL I+FLGPSLSVFSFLFIARIVMSWYPKL VGKFPYVIAYAP EPLL+ATRKVIPPL
Subjt:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPL
XP_004136017.2 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X3 [Cucumis sativus]7.0e-2591.3Show/hide
Query:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPL
        MTLADLDP TAKL I+FLGPSLSVFSFLFIARIVMSWYPKL VGKFPYVIAYAP EPLL+ATRKVIPPL
Subjt:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPL
XP_008451549.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic [Cucumis melo]5.3e-2592.75Show/hide
Query:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPL
        MTLADLDP TAKL I+FLGPSLSVFSFLFIARIVMSWYPKL VGKFPYVIAYAP EPLLIATRKVIPPL
Subjt:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPL
TrEMBL top hitse value%identityAlignment
A0A0A0K9A7 Uncharacterized protein3.4e-2591.3Show/hide
Query:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPL
        MTLADLDP TAKL I+FLGPSLSVFSFLFIARIVMSWYPKL VGKFPYVIAYAP EPLL+ATRKVIPPL
Subjt:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPL
A0A1S3BSI7 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic2.6e-2592.75Show/hide
Query:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPL
        MTLADLDP TAKL I+FLGPSLSVFSFLFIARIVMSWYPKL VGKFPYVIAYAP EPLLIATRKVIPPL
Subjt:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPL
A0A5A7VQJ0 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB32.6e-2592.75Show/hide
Query:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPL
        MTLADLDP TAKL I+FLGPSLSVFSFLFIARIVMSWYPKL VGKFPYVIAYAP EPLLIATRKVIPPL
Subjt:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPL
A0A5D3D3A7 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB32.6e-2592.75Show/hide
Query:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPL
        MTLADLDP TAKL I+FLGPSLSVFSFLFIARIVMSWYPKL VGKFPYVIAYAP EPLLIATRKVIPPL
Subjt:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPL
A0A6J1GQG0 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic4.1e-2386.96Show/hide
Query:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPL
        ++LADLDP TAKL I FLGP LS FSFLFIARIVMSWYPKL VGKFPYVIAYAP EPLLIATRKVIPPL
Subjt:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPL
SwissProt top hitse value%identityAlignment
Q8RWM7 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic8.8e-2375.71Show/hide
Query:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPLA
        ++LADLDP TAKL I  LGP+LS F FLFI RIVMSWYPKL V KFPYV+AYAP EP+L+ TRKVIPPLA
Subjt:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPLA
Arabidopsis top hitse value%identityAlignment
AT5G36120.1 cofactor assembly, complex C (B6F)6.3e-2475.71Show/hide
Query:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPLA
        ++LADLDP TAKL I  LGP+LS F FLFI RIVMSWYPKL V KFPYV+AYAP EP+L+ TRKVIPPLA
Subjt:  MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPLA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTTGGCCGACCTCGACCCGGAAACAGCAAAGCTTGTAATCAACTTTCTGGGGCCGTCTCTCTCGGTGTTTTCGTTTTTGTTTATTGCTAGAATAGTAATGTCTTG
GTATCCCAAGTTGCTTGTGGGGAAGTTTCCATATGTCATAGCTTATGCCCCCATTGAACCACTTCTAATTGCAACAAGGAAGGTGATTCCTCCTCTAGCGGAGTTGACGT
AA
mRNA sequenceShow/hide mRNA sequence
ATGACCTTGGCCGACCTCGACCCGGAAACAGCAAAGCTTGTAATCAACTTTCTGGGGCCGTCTCTCTCGGTGTTTTCGTTTTTGTTTATTGCTAGAATAGTAATGTCTTG
GTATCCCAAGTTGCTTGTGGGGAAGTTTCCATATGTCATAGCTTATGCCCCCATTGAACCACTTCTAATTGCAACAAGGAAGGTGATTCCTCCTCTAGCGGAGTTGACGT
AA
Protein sequenceShow/hide protein sequence
MTLADLDPETAKLVINFLGPSLSVFSFLFIARIVMSWYPKLLVGKFPYVIAYAPIEPLLIATRKVIPPLAELT