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CSPI04G15090 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G15090
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGlycine-rich cell wall structural protein 1.0-like
Genome locationChr4:12581956..12582551
RNA-Seq ExpressionCSPI04G15090
SyntenyCSPI04G15090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649549.1 hypothetical protein Csa_018168, partial [Cucumis sativus]7.7e-4497.96Show/hide
Query:  MSTGKDKNGIYVEGGNTSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNGESGRNSLEVGDGNGGLTGGGGGGGSEASIHETDCGDGDRGGGGVSDHGVG
        MSTGKDKNGIYVEGGNTSTTD NMFSGSSYGGWGWDWTFSTVGDTVNG SGRNSLEVGDGNGGLTGGGGGGGSEASIHETDCGDGDRGGGGVSDHGVG
Subjt:  MSTGKDKNGIYVEGGNTSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNGESGRNSLEVGDGNGGLTGGGGGGGSEASIHETDCGDGDRGGGGVSDHGVG

KAG6595345.1 hypothetical protein SDJN03_11898, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1146.41Show/hide
Query:  MVRTAYIIFPIVVGVFIISNIVVFLLCLLWRKR--KVMSTGKDKNGIYVEGGN-----------TSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNGESGR
        MVRTAYI+ PI VG FIIS  V+ L CLL R+R  K  ++   K+G YVEGGN             TT   MF+G  YGGWGWDWTFS+VGDT NG    
Subjt:  MVRTAYIIFPIVVGVFIISNIVVFLLCLLWRKR--KVMSTGKDKNGIYVEGGN-----------TSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNGESGR

Query:  NSLEVGDGNGGLTGGGGGGGSEASIHETD--------CGDGD------------------------RGGGGVSDHGVGVSSHVDGGGFSYGGGGTSSNDQ
             G+G GG   GGGGG SE     +D        CG+GD                         GGG VSDHG G S H+DGG  ++GGG +S    
Subjt:  NSLEVGDGNGGLTGGGGGGGSEASIHETD--------CGDGD------------------------RGGGGVSDHGVGVSSHVDGGGFSYGGGGTSSNDQ

Query:  GGGGGGGGDGGGGGG----GGGGGGFSDFGGGGSSIW
        GGGGG   D GGGGG    GGGGGG+   G GGSS W
Subjt:  GGGGGGGGDGGGGGG----GGGGGGFSDFGGGGSSIW

XP_008450026.1 PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo]2.8e-4677.78Show/hide
Query:  MSTGKDKNGIYVEGGNTSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNGESGRNSLEVGDGNGGLTGGGGGGGSEASIHETDCGDGDRGGGGVSDHGVGVS
        MS  KDK GIY+EGGNTSTTD NMF+G+SYGGWGWDWTFSTVGDTVNGE G NSLEVGDGNGG+TGG GGGGS  SIHET CG GD GG GVS+HGVGVS
Subjt:  MSTGKDKNGIYVEGGNTSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNGESGRNSLEVGDGNGGLTGGGGGGGSEASIHETDCGDGDRGGGGVSDHGVGVS

Query:  SHVDGGGFSYGGGGTSSNDQGGGGGGGGDGGGGGGGGGGGGFSDFGGGGSSIW
        SHVD GG SYGGGGTSSND             GGGG GGGGFSDFGGGGSSIW
Subjt:  SHVDGGGFSYGGGGTSSNDQGGGGGGGGDGGGGGGGGGGGGFSDFGGGGSSIW

XP_022931867.1 glycine-rich protein 23-like [Cucurbita moschata]1.3e-1147.6Show/hide
Query:  MVRTAYIIFPIVVGVFIISNIVVFLLCLLWRKR--KVMSTGKDKNGIYVEGGN-----------TSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNGE-SG
        MVRTAYI+ PI VG FII   V+ L CLL R+R  K  ++   K+G YVEGGN             TT   MF+G  YGGWGWDWTFS+VGDT NG  +G
Subjt:  MVRTAYIIFPIVVGVFIISNIVVFLLCLLWRKR--KVMSTGKDKNGIYVEGGN-----------TSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNGE-SG

Query:  RNSLEVGDGNGGL--------------TGGGGGGGSEASIHETDCGDG---------DRGGGGVSDHGVGVSSHVDGGGFSYGGGGTSSNDQGGGGGGGG
            +VG G G                 G G G G+ AS HE   GDG           GGG VSD G G S H+DGG  ++GGG +S    GGGGG   
Subjt:  RNSLEVGDGNGGL--------------TGGGGGGGSEASIHETDCGDG---------DRGGGGVSDHGVGVSSHVDGGGFSYGGGGTSSNDQGGGGGGGG

Query:  DGGGGGG----GGGGGGFSDFGGGGSSIW
        D GGGGG    GGGGGG+   GGGGSS W
Subjt:  DGGGGGG----GGGGGGFSDFGGGGSSIW

XP_022966633.1 loricrin-like [Cucurbita maxima]1.2e-0946.3Show/hide
Query:  VFLLCLLWRKR--KVMSTGKDKNGIYVEGGN-----------TSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNG---------------ESGRNSLEVGD
        + L CLL R+R  K  ++   K+G YVEGGN             TT   MF+G  YGGWGWDWTFS+VGDT NG               E G    +VG 
Subjt:  VFLLCLLWRKR--KVMSTGKDKNGIYVEGGN-----------TSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNG---------------ESGRNSLEVGD

Query:  GNGGLTGGGGGGGSEASIHETDCGDG---------DRGGGGVSDHGVGVSSHVDGGGFSYGGGGTS--------SNDQGGGGGGGG-DGGGGGG----GG
        G+G   G G G G+ AS HE   GDG           GGG VSDHG G S H+DGG  ++GGG +S        S+D GGGGGG   D GGGGG    GG
Subjt:  GNGGLTGGGGGGGSEASIHETDCGDG---------DRGGGGVSDHGVGVSSHVDGGGFSYGGGGTS--------SNDQGGGGGGGG-DGGGGGG----GG

Query:  GGGGFSDFGGGGSSIW
        GGGGF   GGGGSS W
Subjt:  GGGGFSDFGGGGSSIW

TrEMBL top hitse value%identityAlignment
A0A0A0KXB6 Uncharacterized protein3.7e-6087.13Show/hide
Query:  MSTGKDKNGIYVEGGNTSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNGESGRNSLEVGDGNGGLTGGGGGGGSEASIHETDCGDGDRGGGGVSDHGVGVS
        MSTGKDKNGIYVEGGNTSTTD NMFSGSSYGGWGWDWTFSTVGDTVNG SGRNSLEVGDGNGGLTGGGGGGGSEASIHETDCGDGDRGGGGVSDHGVGVS
Subjt:  MSTGKDKNGIYVEGGNTSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNGESGRNSLEVGDGNGGLTGGGGGGGSEASIHETDCGDGDRGGGGVSDHGVGVS

Query:  SHVDGGGFSYGGGGTSSNDQ------------------GGGGGGGGDGGGGGGGGGGGGFSDFGGGGSSIW
        SHVDGGGFSYGGGGTSSND+                  GGGGGGGG GGGGGGGGGGGGFSDFGGGGSSIW
Subjt:  SHVDGGGFSYGGGGTSSNDQ------------------GGGGGGGGDGGGGGGGGGGGGFSDFGGGGSSIW

A0A1S3BNC1 glycine-rich cell wall structural protein 1.0-like1.4e-4677.78Show/hide
Query:  MSTGKDKNGIYVEGGNTSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNGESGRNSLEVGDGNGGLTGGGGGGGSEASIHETDCGDGDRGGGGVSDHGVGVS
        MS  KDK GIY+EGGNTSTTD NMF+G+SYGGWGWDWTFSTVGDTVNGE G NSLEVGDGNGG+TGG GGGGS  SIHET CG GD GG GVS+HGVGVS
Subjt:  MSTGKDKNGIYVEGGNTSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNGESGRNSLEVGDGNGGLTGGGGGGGSEASIHETDCGDGDRGGGGVSDHGVGVS

Query:  SHVDGGGFSYGGGGTSSNDQGGGGGGGGDGGGGGGGGGGGGFSDFGGGGSSIW
        SHVD GG SYGGGGTSSND             GGGG GGGGFSDFGGGGSSIW
Subjt:  SHVDGGGFSYGGGGTSSNDQGGGGGGGGDGGGGGGGGGGGGFSDFGGGGSSIW

A0A5A7TNP5 Glycine-rich cell wall structural protein 1.0-like1.4e-4677.78Show/hide
Query:  MSTGKDKNGIYVEGGNTSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNGESGRNSLEVGDGNGGLTGGGGGGGSEASIHETDCGDGDRGGGGVSDHGVGVS
        MS  KDK GIY+EGGNTSTTD NMF+G+SYGGWGWDWTFSTVGDTVNGE G NSLEVGDGNGG+TGG GGGGS  SIHET CG GD GG GVS+HGVGVS
Subjt:  MSTGKDKNGIYVEGGNTSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNGESGRNSLEVGDGNGGLTGGGGGGGSEASIHETDCGDGDRGGGGVSDHGVGVS

Query:  SHVDGGGFSYGGGGTSSNDQGGGGGGGGDGGGGGGGGGGGGFSDFGGGGSSIW
        SHVD GG SYGGGGTSSND             GGGG GGGGFSDFGGGGSSIW
Subjt:  SHVDGGGFSYGGGGTSSNDQGGGGGGGGDGGGGGGGGGGGGFSDFGGGGSSIW

A0A6J1EUX9 glycine-rich protein 23-like6.4e-1247.6Show/hide
Query:  MVRTAYIIFPIVVGVFIISNIVVFLLCLLWRKR--KVMSTGKDKNGIYVEGGN-----------TSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNGE-SG
        MVRTAYI+ PI VG FII   V+ L CLL R+R  K  ++   K+G YVEGGN             TT   MF+G  YGGWGWDWTFS+VGDT NG  +G
Subjt:  MVRTAYIIFPIVVGVFIISNIVVFLLCLLWRKR--KVMSTGKDKNGIYVEGGN-----------TSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNGE-SG

Query:  RNSLEVGDGNGGL--------------TGGGGGGGSEASIHETDCGDG---------DRGGGGVSDHGVGVSSHVDGGGFSYGGGGTSSNDQGGGGGGGG
            +VG G G                 G G G G+ AS HE   GDG           GGG VSD G G S H+DGG  ++GGG +S    GGGGG   
Subjt:  RNSLEVGDGNGGL--------------TGGGGGGGSEASIHETDCGDG---------DRGGGGVSDHGVGVSSHVDGGGFSYGGGGTSSNDQGGGGGGGG

Query:  DGGGGGG----GGGGGGFSDFGGGGSSIW
        D GGGGG    GGGGGG+   GGGGSS W
Subjt:  DGGGGGG----GGGGGGFSDFGGGGSSIW

A0A6J1HSN5 loricrin-like6.0e-1046.3Show/hide
Query:  VFLLCLLWRKR--KVMSTGKDKNGIYVEGGN-----------TSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNG---------------ESGRNSLEVGD
        + L CLL R+R  K  ++   K+G YVEGGN             TT   MF+G  YGGWGWDWTFS+VGDT NG               E G    +VG 
Subjt:  VFLLCLLWRKR--KVMSTGKDKNGIYVEGGN-----------TSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNG---------------ESGRNSLEVGD

Query:  GNGGLTGGGGGGGSEASIHETDCGDG---------DRGGGGVSDHGVGVSSHVDGGGFSYGGGGTS--------SNDQGGGGGGGG-DGGGGGG----GG
        G+G   G G G G+ AS HE   GDG           GGG VSDHG G S H+DGG  ++GGG +S        S+D GGGGGG   D GGGGG    GG
Subjt:  GNGGLTGGGGGGGSEASIHETDCGDG---------DRGGGGVSDHGVGVSSHVDGGGFSYGGGGTS--------SNDQGGGGGGGG-DGGGGGG----GG

Query:  GGGGFSDFGGGGSSIW
        GGGGF   GGGGSS W
Subjt:  GGGGFSDFGGGGSSIW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAGAACAGCATACATCATATTTCCCATTGTTGTTGGGGTTTTTATAATTTCTAATATTGTTGTATTTTTGTTGTGTTTACTTTGGCGGAAGAGGAAAGTAATGTC
TACGGGAAAAGATAAAAATGGAATTTATGTTGAAGGTGGAAATACGAGTACAACAGACAGGAATATGTTTTCCGGCAGTAGTTATGGAGGTTGGGGTTGGGATTGGACTT
TTAGCACTGTAGGAGATACAGTCAACGGCGAAAGTGGCAGGAATAGTCTTGAGGTTGGAGATGGAAACGGTGGCCTTACTGGAGGCGGCGGAGGAGGTGGCAGTGAAGCA
AGTATTCATGAGACAGATTGTGGTGATGGTGATAGAGGAGGTGGAGGGGTTTCTGATCATGGAGTTGGTGTGAGTTCCCATGTGGATGGAGGAGGTTTTAGTTATGGAGG
TGGAGGAACAAGTTCTAATGATCAGGGCGGAGGTGGAGGTGGAGGTGGTGATGGAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGGTTTTCTGATTTTGGAGGGGGAG
GATCATCTATTTGGTGA
mRNA sequenceShow/hide mRNA sequence
GTCTTCTAATATTATCTTAGAGATCGATAATGGTTAGAACAGCATACATCATATTTCCCATTGTTGTTGGGGTTTTTATAATTTCTAATATTGTTGTATTTTTGTTGTGT
TTACTTTGGCGGAAGAGGAAAGTAATGTCTACGGGAAAAGATAAAAATGGAATTTATGTTGAAGGTGGAAATACGAGTACAACAGACAGGAATATGTTTTCCGGCAGTAG
TTATGGAGGTTGGGGTTGGGATTGGACTTTTAGCACTGTAGGAGATACAGTCAACGGCGAAAGTGGCAGGAATAGTCTTGAGGTTGGAGATGGAAACGGTGGCCTTACTG
GAGGCGGCGGAGGAGGTGGCAGTGAAGCAAGTATTCATGAGACAGATTGTGGTGATGGTGATAGAGGAGGTGGAGGGGTTTCTGATCATGGAGTTGGTGTGAGTTCCCAT
GTGGATGGAGGAGGTTTTAGTTATGGAGGTGGAGGAACAAGTTCTAATGATCAGGGCGGAGGTGGAGGTGGAGGTGGTGATGGAGGTGGAGGTGGAGGTGGAGGTGGAGG
TGGAGGGTTTTCTGATTTTGGAGGGGGAGGATCATCTATTTGGTGA
Protein sequenceShow/hide protein sequence
MVRTAYIIFPIVVGVFIISNIVVFLLCLLWRKRKVMSTGKDKNGIYVEGGNTSTTDRNMFSGSSYGGWGWDWTFSTVGDTVNGESGRNSLEVGDGNGGLTGGGGGGGSEA
SIHETDCGDGDRGGGGVSDHGVGVSSHVDGGGFSYGGGGTSSNDQGGGGGGGGDGGGGGGGGGGGGFSDFGGGGSSIW