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CSPI04G15120 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G15120
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCtenidin-1-like
Genome locationChr4:12595536..12595968
RNA-Seq ExpressionCSPI04G15120
SyntenyCSPI04G15120
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045150.1 ctenidin-1-like [Cucumis melo var. makuwa]1.1e-2175.53Show/hide
Query:  MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHHVA-VAHSGGGGHDC------GGGAGGGGGSSSAC
        MA   VI+ LVFV +VV F +LS ICW SG SSSGGGHAHFGGAAH GGFHHHAGGHAHHVA V HSGGGGHDC      GGG GGGGGSSSAC
Subjt:  MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHHVA-VAHSGGGGHDC------GGGAGGGGGSSSAC

KAG6581831.1 hypothetical protein SDJN03_21833, partial [Cucurbita argyrosperma subsp. sororia]2.9e-0964.29Show/hide
Query:  MADP-FVIVPLVFVSVVVLFTVLSFIC-WTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHHVAVAHSGGGGHDCGGGAGGGGG
        M DP F+I+P+VF+S+ V+FTVLS +C  T+G ++SGGG AHFGGAAHAGG HH  G  A H A  H GGGGHD GGG GGGGG
Subjt:  MADP-FVIVPLVFVSVVVLFTVLSFIC-WTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHHVAVAHSGGGGHDCGGGAGGGGG

KGN54298.1 hypothetical protein Csa_017993 [Cucumis sativus]9.8e-3498.85Show/hide
Query:  MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHHVAVAHSGGGGHDCGGGAGGGGGSSSAC
        MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHHVAVAHSGGGGH CGGGAGGGGGSSSAC
Subjt:  MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHHVAVAHSGGGGHDCGGGAGGGGGSSSAC

XP_008450046.1 PREDICTED: ctenidin-1-like [Cucumis melo]2.4e-1669.89Show/hide
Query:  MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHHVA-VAHSGGGGHDCGGGA-------GGGGGSSS
        MA   VI+ LVFV +VV F +LS ICW SG SSSGGGHAHFGGAAH GGFHHHAGGHAHHVA V HSGGGGHDCG  A         GGGSS+
Subjt:  MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHHVA-VAHSGGGGHDCGGGA-------GGGGGSSS

XP_011654372.1 glycine-rich protein DOT1 [Cucumis sativus]1.1e-3298.84Show/hide
Query:  MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHHVAVAHSGGGGHDCGGGAGGGGGSSSA
        MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHHVAVAHSGGGGH CGGGAGGGGGSSSA
Subjt:  MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHHVAVAHSGGGGHDCGGGAGGGGGSSSA

TrEMBL top hitse value%identityAlignment
A0A0A0KXN6 Uncharacterized protein4.7e-3498.85Show/hide
Query:  MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHHVAVAHSGGGGHDCGGGAGGGGGSSSAC
        MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHHVAVAHSGGGGH CGGGAGGGGGSSSAC
Subjt:  MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHHVAVAHSGGGGHDCGGGAGGGGGSSSAC

A0A1S3BPC8 ctenidin-1-like1.2e-1669.89Show/hide
Query:  MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHHVA-VAHSGGGGHDCGGGA-------GGGGGSSS
        MA   VI+ LVFV +VV F +LS ICW SG SSSGGGHAHFGGAAH GGFHHHAGGHAHHVA V HSGGGGHDCG  A         GGGSS+
Subjt:  MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHHVA-VAHSGGGGHDCGGGA-------GGGGGSSS

A0A5D3DIY3 Ctenidin-1-like5.4e-2275.53Show/hide
Query:  MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHHVA-VAHSGGGGHDC------GGGAGGGGGSSSAC
        MA   VI+ LVFV +VV F +LS ICW SG SSSGGGHAHFGGAAH GGFHHHAGGHAHHVA V HSGGGGHDC      GGG GGGGGSSSAC
Subjt:  MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHHVA-VAHSGGGGHDC------GGGAGGGGGSSSAC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGACCCGTTTGTTATAGTCCCATTGGTTTTTGTTTCCGTTGTTGTATTGTTCACGGTGTTGAGTTTTATTTGCTGGACATCTGGGGCCAGTTCCAGCGGCGGAGG
ACATGCTCATTTCGGCGGCGCTGCCCATGCTGGAGGATTCCATCATCATGCCGGCGGTCATGCTCACCACGTGGCCGTAGCCCATTCTGGAGGTGGAGGACACGATTGTG
GTGGTGGCGCCGGAGGTGGAGGTGGCTCTAGCTCTGCCTGTTGA
mRNA sequenceShow/hide mRNA sequence
AAACCTTCTTAGGGAAAGCAAAAAAAAAAAAAATATTATTATATTCTAAAAAACAAAAGGGTCCATACTCCATACCATTACAAAAAAAAAATGGCTGACCCGTTTGTTAT
AGTCCCATTGGTTTTTGTTTCCGTTGTTGTATTGTTCACGGTGTTGAGTTTTATTTGCTGGACATCTGGGGCCAGTTCCAGCGGCGGAGGACATGCTCATTTCGGCGGCG
CTGCCCATGCTGGAGGATTCCATCATCATGCCGGCGGTCATGCTCACCACGTGGCCGTAGCCCATTCTGGAGGTGGAGGACACGATTGTGGTGGTGGCGCCGGAGGTGGA
GGTGGCTCTAGCTCTGCCTGTTGATGACCTTTTTTTTTTCCTGTCAATTGTGGCCGTATATATGTAATTTAATTAAACGGTTAATCAGGTTATAATCTCTCCC
Protein sequenceShow/hide protein sequence
MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHHVAVAHSGGGGHDCGGGAGGGGGSSSAC