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CSPI04G15230 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G15230
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr4:12689196..12689700
RNA-Seq ExpressionCSPI04G15230
SyntenyCSPI04G15230
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595353.1 hypothetical protein SDJN03_11906, partial [Cucurbita argyrosperma subsp. sororia]5.9e-2458.54Show/hide
Query:  LPPFLFLLFIFANALFSSLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDHHKSRDKSIAGGGVILGG
        + PFLFLLFIFA+AL  S A AA P       PS RKLG H S A   SSP+EAP+S +KV                L N +HHKSRD SIAGGGVILGG
Subjt:  LPPFLFLLFIFANALFSSLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDHHKSRDKSIAGGGVILGG

Query:  LATTFLVAVICYIRATRRQKSEL
        LATTF VA+ICYIRAT+RQ SE+
Subjt:  LATTFLVAVICYIRATRRQKSEL

KAG6603622.1 hypothetical protein SDJN03_04231, partial [Cucurbita argyrosperma subsp. sororia]1.0e-3672.5Show/hide
Query:  MLPPFLFLLFIFANALFSSLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDHHKSRDKSIAGGGVILG
        ++ PFLFLLFIFANAL  S+A  AAPPPT+AE PS RKLGKH STA+ FSSP+EAPRS  KV   S A+ G +GN +EL NH+HHKS DKS+AGGGVILG
Subjt:  MLPPFLFLLFIFANALFSSLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDHHKSRDKSIAGGGVILG

Query:  GLATTFLVAVICYIRATRRQ
        GLATTFLVA++CYIRATRRQ
Subjt:  GLATTFLVAVICYIRATRRQ

KGN54308.1 hypothetical protein Csa_017945 [Cucumis sativus]4.4e-59100Show/hide
Query:  MLPPFLFLLFIFANALFSSLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDHHKSRDKSIAGGGVILG
        MLPPFLFLLFIFANALFSSLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDHHKSRDKSIAGGGVILG
Subjt:  MLPPFLFLLFIFANALFSSLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDHHKSRDKSIAGGGVILG

Query:  GLATTFLVAVICYIRATRRQKSELGS
        GLATTFLVAVICYIRATRRQKSELGS
Subjt:  GLATTFLVAVICYIRATRRQKSELGS

XP_008448528.1 PREDICTED: uncharacterized protein LOC103490675 [Cucumis melo]2.2e-5593.65Show/hide
Query:  MLPPFLFLLFIFANALFSSLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDHHKSRDKSIAGGGVILG
        M+PPFLFLLFIFANA FSSLAAAAAPPPTSAESPS+RKLGKHQSTAIAFSSP EAPRS MKVQGTS ASGGESGNAV+LGNHDHHKSRDKSIAGGGVILG
Subjt:  MLPPFLFLLFIFANALFSSLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDHHKSRDKSIAGGGVILG

Query:  GLATTFLVAVICYIRATRRQKSELGS
        GLATTFLVA+ICYIRATRRQKSELGS
Subjt:  GLATTFLVAVICYIRATRRQKSELGS

XP_022151558.1 uncharacterized protein LOC111019472 [Momordica charantia]4.9e-2661.07Show/hide
Query:  FLFLLFIFANALFSSL-------AAAAAPPPTSAESPSVRKLGKHQSTAI--AFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDH--HKSRDKSIA
        FLF+LFIFANA  +S+        AA +P  T AE+PS RKLGKH+S A   + SSP+EAPRS MKVQ TS A       A   G+H H  HK+ DKSIA
Subjt:  FLFLLFIFANALFSSL-------AAAAAPPPTSAESPSVRKLGKHQSTAI--AFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDH--HKSRDKSIA

Query:  GGGVILGGLATTFLVAVICYIRATRRQKSEL
        GGGVILGGLATTFLVA+ICYIRATRR  SE+
Subjt:  GGGVILGGLATTFLVAVICYIRATRRQKSEL

TrEMBL top hitse value%identityAlignment
A0A0A0KXQ0 Uncharacterized protein2.1e-59100Show/hide
Query:  MLPPFLFLLFIFANALFSSLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDHHKSRDKSIAGGGVILG
        MLPPFLFLLFIFANALFSSLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDHHKSRDKSIAGGGVILG
Subjt:  MLPPFLFLLFIFANALFSSLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDHHKSRDKSIAGGGVILG

Query:  GLATTFLVAVICYIRATRRQKSELGS
        GLATTFLVAVICYIRATRRQKSELGS
Subjt:  GLATTFLVAVICYIRATRRQKSELGS

A0A1S3BJV8 uncharacterized protein LOC1034906751.1e-5593.65Show/hide
Query:  MLPPFLFLLFIFANALFSSLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDHHKSRDKSIAGGGVILG
        M+PPFLFLLFIFANA FSSLAAAAAPPPTSAESPS+RKLGKHQSTAIAFSSP EAPRS MKVQGTS ASGGESGNAV+LGNHDHHKSRDKSIAGGGVILG
Subjt:  MLPPFLFLLFIFANALFSSLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDHHKSRDKSIAGGGVILG

Query:  GLATTFLVAVICYIRATRRQKSELGS
        GLATTFLVA+ICYIRATRRQKSELGS
Subjt:  GLATTFLVAVICYIRATRRQKSELGS

A0A5A7TSM2 Uncharacterized protein1.1e-5593.65Show/hide
Query:  MLPPFLFLLFIFANALFSSLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDHHKSRDKSIAGGGVILG
        M+PPFLFLLFIFANA FSSLAAAAAPPPTSAESPS+RKLGKHQSTAIAFSSP EAPRS MKVQGTS ASGGESGNAV+LGNHDHHKSRDKSIAGGGVILG
Subjt:  MLPPFLFLLFIFANALFSSLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDHHKSRDKSIAGGGVILG

Query:  GLATTFLVAVICYIRATRRQKSELGS
        GLATTFLVA+ICYIRATRRQKSELGS
Subjt:  GLATTFLVAVICYIRATRRQKSELGS

A0A5D2BCQ1 Uncharacterized protein5.8e-1746.76Show/hide
Query:  LFLLFIFANALFSSLAAAAAP-PPTSAESPSVRKLGKHQSTA----IAFSSPTEAPRSVMKVQGTSGASGGE----------------SGNAVELGNHDH
        LFL+  F     S  A A AP  P  AE+P++RKLGKHQ          SSP++AP +   +  T G+   +                 G A+ L NH H
Subjt:  LFLLFIFANALFSSLAAAAAP-PPTSAESPSVRKLGKHQSTA----IAFSSPTEAPRSVMKVQGTSGASGGE----------------SGNAVELGNHDH

Query:  HKSRDKSIAGGGVILGGLATTFLVAVICYIRATRRQKSE
        H S DKS+AGGGVILGGLATTFLVAV CYIRAT R K E
Subjt:  HKSRDKSIAGGGVILGGLATTFLVAVICYIRATRRQKSE

A0A6J1DCH7 uncharacterized protein LOC1110194722.4e-2661.07Show/hide
Query:  FLFLLFIFANALFSSL-------AAAAAPPPTSAESPSVRKLGKHQSTAI--AFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDH--HKSRDKSIA
        FLF+LFIFANA  +S+        AA +P  T AE+PS RKLGKH+S A   + SSP+EAPRS MKVQ TS A       A   G+H H  HK+ DKSIA
Subjt:  FLFLLFIFANALFSSL-------AAAAAPPPTSAESPSVRKLGKHQSTAI--AFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDH--HKSRDKSIA

Query:  GGGVILGGLATTFLVAVICYIRATRRQKSEL
        GGGVILGGLATTFLVA+ICYIRATRR  SE+
Subjt:  GGGVILGGLATTFLVAVICYIRATRRQKSEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein9.5e-1245.63Show/hide
Query:  SLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDHHKSRDKSIAGGGVILGGLATTFLVAVICYIRATR
        S+AAA+    + AE P+ RKLG+H+          EAP  V  ++ T           V  G+  HH + ++S+AGGGVILGGLATTFLV V CYIRATR
Subjt:  SLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDHHKSRDKSIAGGGVILGGLATTFLVAVICYIRATR

Query:  RQK
        + K
Subjt:  RQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCTCCATTTCTATTCCTTCTCTTCATCTTCGCCAATGCTCTTTTCAGTTCACTCGCCGCCGCTGCCGCTCCACCACCTACCTCCGCCGAATCGCCTTCTGTAAG
AAAGCTTGGGAAGCACCAGAGTACGGCGATTGCCTTTTCGAGTCCGACTGAAGCGCCGCGAAGCGTAATGAAAGTCCAGGGGACCTCGGGGGCGAGCGGTGGAGAGAGTG
GGAATGCGGTTGAATTGGGGAATCATGACCATCACAAGTCGAGAGATAAGTCTATCGCCGGCGGAGGTGTGATTTTGGGCGGACTCGCTACGACTTTTTTGGTGGCGGTT
ATATGTTACATAAGAGCTACGAGACGACAGAAAAGTGAACTTGGCTCTTGA
mRNA sequenceShow/hide mRNA sequence
CTCAAATCTCACCTCCACGAATATGCTTCCTCCATTTCTATTCCTTCTCTTCATCTTCGCCAATGCTCTTTTCAGTTCACTCGCCGCCGCTGCCGCTCCACCACCTACCT
CCGCCGAATCGCCTTCTGTAAGAAAGCTTGGGAAGCACCAGAGTACGGCGATTGCCTTTTCGAGTCCGACTGAAGCGCCGCGAAGCGTAATGAAAGTCCAGGGGACCTCG
GGGGCGAGCGGTGGAGAGAGTGGGAATGCGGTTGAATTGGGGAATCATGACCATCACAAGTCGAGAGATAAGTCTATCGCCGGCGGAGGTGTGATTTTGGGCGGACTCGC
TACGACTTTTTTGGTGGCGGTTATATGTTACATAAGAGCTACGAGACGACAGAAAAGTGAACTTGGCTCTTGAGACGACATGTCGTCCGCCTTGGTTTGTTTGTTGTGTA
ATTGTATTTTTTTTAAAAGGAGGATGTAATTGTAATTAACCATAAGTATAAAAATCAAAGGCCAC
Protein sequenceShow/hide protein sequence
MLPPFLFLLFIFANALFSSLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMKVQGTSGASGGESGNAVELGNHDHHKSRDKSIAGGGVILGGLATTFLVAV
ICYIRATRRQKSELGS