; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G15750 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G15750
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationChr4:13096953..13098597
RNA-Seq ExpressionCSPI04G15750
SyntenyCSPI04G15750
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147887.1 chlorophyll a-b binding protein CP29.1, chloroplastic [Cucumis sativus]3.0e-161100Show/hide
Query:  MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
Subjt:  MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
        AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

XP_008449241.1 PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucumis melo]5.7e-16098.94Show/hide
Query:  MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        MATAAATSSF+GTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
Subjt:  MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
        AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

XP_022950626.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita moschata]3.1e-15394.7Show/hide
Query:  ATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSF+GTRL ++ PSS RVQARFGFGKKK+P KKSPSSK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFESA+VKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL+VE LTG+TWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

XP_022978220.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita maxima]1.4e-15394.7Show/hide
Query:  ATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSF+GTRL ++ PSSGRVQARFGFGKKK+P KKSPSSK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFE+A+VKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL+VE LTG+TWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

XP_038882769.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Benincasa hispida]1.8e-15897.89Show/hide
Query:  MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        MATAAATSSF+GTRLAE+ P SGRVQARFGFGKKKSPPKKSPSSK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
Subjt:  MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
        AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELDPEKRLYPGGKFFDPLGLAEDPEKK VLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

TrEMBL top hitse value%identityAlignment
A0A0A0KXI3 Chlorophyll a-b binding protein, chloroplastic1.5e-161100Show/hide
Query:  MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
Subjt:  MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
        AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

A0A1S3BMH8 Chlorophyll a-b binding protein, chloroplastic2.8e-16098.94Show/hide
Query:  MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        MATAAATSSF+GTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
Subjt:  MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
        AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

A0A5D3BBB3 Chlorophyll a-b binding protein, chloroplastic2.8e-16098.94Show/hide
Query:  MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        MATAAATSSF+GTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
Subjt:  MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
        AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

A0A6J1GFC4 Chlorophyll a-b binding protein, chloroplastic1.5e-15394.7Show/hide
Query:  ATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSF+GTRL ++ PSS RVQARFGFGKKK+P KKSPSSK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFESA+VKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL+VE LTG+TWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

A0A6J1IPG0 Chlorophyll a-b binding protein, chloroplastic6.6e-15494.7Show/hide
Query:  ATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSF+GTRL ++ PSSGRVQARFGFGKKK+P KKSPSSK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFE+A+VKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL+VE LTG+TWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

SwissProt top hitse value%identityAlignment
Q01667 Chlorophyll a-b binding protein 6, chloroplastic8.9e-3941.63Show/hide
Query:  WFPGAKAPEWLDGSLVGDYGFDPFGLGK-PAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALS
        W PG   P +LDGS  GD+GFDP GLG+ PA                                             L+R++E ELIH RWAMLA  G L 
Subjt:  WFPGAKAPEWLDGSLVGDYGFDPFGLGK-PAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALS

Query:  VEWLTGVTWQDAGKVELVEG--SSYLGQPLPF-SITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAF
         E L    W  A +   + G  ++YLG P+P+ ++ T++ IE L I ++E QR+ E DPEK+ YPGG  FDPLG ++DP+K   L++ EIK+ RLA++AF
Subjt:  VEWLTGVTWQDAGKVELVEG--SSYLGQPLPF-SITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAF

Query:  LGFAV-QAAVTGKGPLNNWATHLSDPLHTTIID
        +GF V Q+A  G GPL N ATHL+DP H  I D
Subjt:  LGFAV-QAAVTGKGPLNNWATHLSDPLHTTIID

Q07473 Chlorophyll a-b binding protein CP29.1, chloroplastic6.9e-14085.21Show/hide
Query:  ATAAATSSFLGTRLAE-IVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        A AAA SS +GTR+A  I P SGR  A FGFGKKK+ PKKS    V +DRPLW+PGA +P+WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQNLAKN+
Subjt:  ATAAATSSFLGTRLAE-IVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
        AGD+IGTR E+A+ KSTPFQPY+EVFG+QRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELD EKRLYPGGKFFDPLGLA DPEK A LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Subjt:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

Q93WD2 Chlorophyll a-b binding protein CP292.5e-6558.67Show/hide
Query:  LWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTP--------FQPYTEVFGLQRFRECELIHGRWAM
        LW P    PEWLDGSL GD GFDP GL KP+E++   +D  DQN AKN  G +       A V++TP          PY+EVFGL RFRECELIHGRWAM
Subjt:  LWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTP--------FQPYTEVFGLQRFRECELIHGRWAM

Query:  LATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAV-LQLAEIKHAR
        LA LGAL  E  TGV+W +AGKVEL +G+SY G  LPFSIT LIWIEV+++G  EF RN+E +PEKR YPGG  FDPL LA + E++A  L+ AEIKHAR
Subjt:  LATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAV-LQLAEIKHAR

Query:  LAMVAFLGFAVQAAVTGKGPLNNWA
        LAMV+F G+ VQA  TG+G L + A
Subjt:  LAMVAFLGFAVQAAVTGKGPLNNWA

Q9S7W1 Chlorophyll a-b binding protein CP29.3, chloroplastic1.1e-11375.93Show/hide
Query:  TAAATSSFLGTRLAEIVPSSGRVQARFG--FGKKK--SPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        TAAA S   G R+ +  P +GRVQARFG  FGKKK   PPKKS   +   DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAK
Subjt:  TAAATSSFLGTRLAEIVPSSGRVQARFG--FGKKK--SPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE
        NVAGDIIG   ES+E+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLV+GYIE
Subjt:  NVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE

Query:  FQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT
        FQRN+ELDPEKR+YPGG +FDPLGLA DPEK   L+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  FQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT

Q9XF88 Chlorophyll a-b binding protein CP29.2, chloroplastic2.1e-13683.8Show/hide
Query:  ATAAATSSFLGTR-LAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        +TAAA SS +GTR +++I  +S R  ARFGFG KK+ PKK+ +  VISDRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+
Subjt:  ATAAATSSFLGTR-LAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
         G++IGTR E+ + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELD EKRLYPGGKFFDPLGLA DP KKA LQLAEIKHARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Subjt:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

Arabidopsis top hitse value%identityAlignment
AT2G40100.1 light harvesting complex photosystem II7.8e-11575.93Show/hide
Query:  TAAATSSFLGTRLAEIVPSSGRVQARFG--FGKKK--SPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        TAAA S   G R+ +  P +GRVQARFG  FGKKK   PPKKS   +   DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAK
Subjt:  TAAATSSFLGTRLAEIVPSSGRVQARFG--FGKKK--SPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE
        NVAGDIIG   ES+E+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLV+GYIE
Subjt:  NVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE

Query:  FQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT
        FQRN+ELDPEKR+YPGG +FDPLGLA DPEK   L+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  FQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT

AT2G40100.2 light harvesting complex photosystem II2.3e-6672.78Show/hide
Query:  TAAATSSFLGTRLAEIVPSSGRVQARFG--FGKKK--SPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        TAAA S   G R+ +  P +GRVQARFG  FGKKK   PPKKS   +   DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAK
Subjt:  TAAATSSFLGTRLAEIVPSSGRVQARFG--FGKKK--SPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVE
        NVAGDIIG   ES+E+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVE
Subjt:  NVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVE

AT3G08940.1 light harvesting complex photosystem II2.2e-7274.03Show/hide
Query:  ATAAATSSFLGTR-LAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        +TAAA SS +GTR +++I  +S R  ARFGFG KK+ PKK+ +  VISDRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+
Subjt:  ATAAATSSFLGTR-LAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF
         G++IGTR E+ + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKV  +  SS L   L F
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF

AT3G08940.2 light harvesting complex photosystem II1.5e-13783.8Show/hide
Query:  ATAAATSSFLGTR-LAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        +TAAA SS +GTR +++I  +S R  ARFGFG KK+ PKK+ +  VISDRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+
Subjt:  ATAAATSSFLGTR-LAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
         G++IGTR E+ + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELD EKRLYPGGKFFDPLGLA DP KKA LQLAEIKHARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Subjt:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

AT5G01530.1 light harvesting complex photosystem II4.9e-14185.21Show/hide
Query:  ATAAATSSFLGTRLAE-IVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        A AAA SS +GTR+A  I P SGR  A FGFGKKK+ PKKS    V +DRPLW+PGA +P+WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQNLAKN+
Subjt:  ATAAATSSFLGTRLAE-IVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
        AGD+IGTR E+A+ KSTPFQPY+EVFG+QRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELD EKRLYPGGKFFDPLGLA DPEK A LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Subjt:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGCCGCCGCAACCTCCTCCTTCCTCGGTACACGCCTCGCCGAAATAGTCCCCAGTTCTGGCAGAGTCCAAGCCCGGTTCGGCTTTGGAAAGAAAAAGAGTCC
GCCGAAGAAATCGCCGTCGTCTAAGGTGATTTCCGACCGGCCCCTGTGGTTTCCAGGAGCCAAGGCCCCGGAATGGCTGGACGGAAGCTTGGTAGGGGACTATGGATTTG
ATCCATTTGGGTTGGGGAAACCGGCGGAGTATTTGCAGTATGATTTGGACTCGTTGGATCAAAATTTGGCCAAGAATGTGGCCGGAGATATAATTGGGACAAGATTTGAG
AGCGCGGAAGTGAAATCGACGCCGTTTCAGCCGTACACGGAGGTATTTGGATTGCAGAGATTCCGTGAGTGTGAGCTTATTCATGGACGGTGGGCAATGCTGGCTACACT
CGGTGCTCTCTCTGTTGAATGGCTCACCGGTGTTACTTGGCAAGACGCCGGAAAAGTAGAATTAGTGGAAGGTTCATCGTACCTAGGCCAACCACTTCCCTTCTCCATCA
CTACACTAATCTGGATCGAAGTTCTAGTGATCGGCTACATTGAGTTCCAAAGGAATGCGGAGCTGGACCCGGAGAAAAGGTTGTACCCAGGAGGCAAGTTTTTCGACCCT
CTGGGGTTGGCTGAGGACCCAGAAAAGAAAGCAGTGCTACAATTGGCTGAGATCAAGCATGCTCGCCTAGCCATGGTTGCGTTCCTTGGGTTTGCGGTTCAAGCTGCTGT
GACTGGCAAAGGTCCACTCAACAACTGGGCTACCCATCTCAGTGACCCTCTCCACACCACTATTATTGACAACTTCTCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
CGGGGATAAGGGCAGAGGTCACAGAAGCCATCAGATGGATTCGTCCCACAATCCAACGGACAAAAAACCACAACAATCAGATTATGTGGCAATCGCCGATCACACTTCCC
CTTTCTCAACCACATAATAACCCAACCAAAATCCCCAATTTCCCATCTCACATTCTCCAATCCCTCACTCAAACTCCTCCTAATGGCCACCGCCGCCGCAACCTCCTCCT
TCCTCGGTACACGCCTCGCCGAAATAGTCCCCAGTTCTGGCAGAGTCCAAGCCCGGTTCGGCTTTGGAAAGAAAAAGAGTCCGCCGAAGAAATCGCCGTCGTCTAAGGTG
ATTTCCGACCGGCCCCTGTGGTTTCCAGGAGCCAAGGCCCCGGAATGGCTGGACGGAAGCTTGGTAGGGGACTATGGATTTGATCCATTTGGGTTGGGGAAACCGGCGGA
GTATTTGCAGTATGATTTGGACTCGTTGGATCAAAATTTGGCCAAGAATGTGGCCGGAGATATAATTGGGACAAGATTTGAGAGCGCGGAAGTGAAATCGACGCCGTTTC
AGCCGTACACGGAGGTATTTGGATTGCAGAGATTCCGTGAGTGTGAGCTTATTCATGGACGGTGGGCAATGCTGGCTACACTCGGTGCTCTCTCTGTTGAATGGCTCACC
GGTGTTACTTGGCAAGACGCCGGAAAAGTAGAATTAGTGGAAGGTTCATCGTACCTAGGCCAACCACTTCCCTTCTCCATCACTACACTAATCTGGATCGAAGTTCTAGT
GATCGGCTACATTGAGTTCCAAAGGAATGCGGAGCTGGACCCGGAGAAAAGGTTGTACCCAGGAGGCAAGTTTTTCGACCCTCTGGGGTTGGCTGAGGACCCAGAAAAGA
AAGCAGTGCTACAATTGGCTGAGATCAAGCATGCTCGCCTAGCCATGGTTGCGTTCCTTGGGTTTGCGGTTCAAGCTGCTGTGACTGGCAAAGGTCCACTCAACAACTGG
GCTACCCATCTCAGTGACCCTCTCCACACCACTATTATTGACAACTTCTCTTCTTAAGGCTCCTCTTAATTGTCTCCTCCATTACTCGTCTTCTTCATTATTGTCTCTTT
CCAGTTTGTATAAAACTTGACTGAGTTATGTGATCCTGAGCTGTAAGTAGTACTTTGCTTCGCGATTCCTATGTTAAATTATATTATATATGGTGTTACGACACAAATCA
AAAACCGTTCTTTATTTCATTCCGATTGGTTTTGAATCATTCTTGAGGTGATTTTATATTGCCTAAAATTTTGTGGTTTCAATTGGGGAAGATGAATTGGAAAATAAAGT
TATGGTACAATCAAAGTTTTTAATGGTCA
Protein sequenceShow/hide protein sequence
MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFE
SAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDP
LGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS