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CSPI04G15820 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G15820
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description30S ribosomal protein S31, chloroplastic
Genome locationChr4:13134758..13135738
RNA-Seq ExpressionCSPI04G15820
SyntenyCSPI04G15820
Gene Ontology termsGO:0032544 - plastid translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR030826 - 30S ribosomal protein
IPR044695 - 30S ribosomal protein S31, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147884.1 30S ribosomal protein S31, chloroplastic [Cucumis sativus]5.5e-5699.15Show/hide
Query:  MASLPFGLLQAPSQSPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDK
        MASLPFGLLQAPSQSPRFFSFSK EALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDK
Subjt:  MASLPFGLLQAPSQSPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDK

Query:  FDDNEKIKIEIDESLFGS
        FDDNEKIKIEIDESLFGS
Subjt:  FDDNEKIKIEIDESLFGS

XP_008449316.1 PREDICTED: 30S ribosomal protein S31, chloroplastic [Cucumis melo]5.3e-5190.16Show/hide
Query:  MASLPFGLLQAPSQS----PRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        M SLPFGLLQAPSQS    P +FSFSK E LGTSLRASSTASLAISTPSSPSSIPA+YCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
Subjt:  MASLPFGLLQAPSQS----PRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDNEKIKIEIDESLFGS
        RKDKFDD+EKIKIEIDESLF S
Subjt:  RKDKFDDNEKIKIEIDESLFGS

XP_022151467.1 30S ribosomal protein S31, chloroplastic [Momordica charantia]2.0e-4585Show/hide
Query:  MASLPFGLLQAPSQ----SPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        MASLPFGLLQA SQ    SPRFFSFSK E LGTSLRA STASLA S  SSPSS+PA+YCGRGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVPTPP+PP
Subjt:  MASLPFGLLQAPSQ----SPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDNEKIKIEIDESLF
        RKDKF+D+EKIKIEID+SLF
Subjt:  RKDKFDDNEKIKIEIDESLF

XP_023517799.1 30S ribosomal protein S31, chloroplastic [Cucurbita pepo subsp. pepo]5.9e-4280.83Show/hide
Query:  MASLPFGLLQA----PSQSPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        MASLPFGLLQA    P+ SPR FSFSK E LGTSLR S+     IS  SSPSSIPA+YCGRGDKKTE+GKRF HS+GNARPRDKTKGRGTPRVPTPPSPP
Subjt:  MASLPFGLLQA----PSQSPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDNEKIKIEIDESLF
        RKDKFDD+EKIKIEIDESLF
Subjt:  RKDKFDDNEKIKIEIDESLF

XP_038882305.1 30S ribosomal protein S31, chloroplastic [Benincasa hispida]2.7e-4786.07Show/hide
Query:  MASLPFGLLQAPSQ----SPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        MASLPFGLLQA SQ    SPRFFSFSK E LGTSLRASSTASLA ST SSPSSIPA+YCGRGDKKTE+GKRFN SYGNARPR+KTKGRGTPRVPTPPSPP
Subjt:  MASLPFGLLQAPSQ----SPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDNEKIKIEIDESLFGS
        RKDKF+D+EKIKIEIDESLF +
Subjt:  RKDKFDDNEKIKIEIDESLFGS

TrEMBL top hitse value%identityAlignment
A0A0A0KXY4 Uncharacterized protein2.7e-5699.15Show/hide
Query:  MASLPFGLLQAPSQSPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDK
        MASLPFGLLQAPSQSPRFFSFSK EALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDK
Subjt:  MASLPFGLLQAPSQSPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDK

Query:  FDDNEKIKIEIDESLFGS
        FDDNEKIKIEIDESLFGS
Subjt:  FDDNEKIKIEIDESLFGS

A0A1S3BL51 30S ribosomal protein S31, chloroplastic2.6e-5190.16Show/hide
Query:  MASLPFGLLQAPSQS----PRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        M SLPFGLLQAPSQS    P +FSFSK E LGTSLRASSTASLAISTPSSPSSIPA+YCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
Subjt:  MASLPFGLLQAPSQS----PRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDNEKIKIEIDESLFGS
        RKDKFDD+EKIKIEIDESLF S
Subjt:  RKDKFDDNEKIKIEIDESLFGS

A0A5A7TU27 30S ribosomal protein S312.6e-5190.16Show/hide
Query:  MASLPFGLLQAPSQS----PRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        M SLPFGLLQAPSQS    P +FSFSK E LGTSLRASSTASLAISTPSSPSSIPA+YCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
Subjt:  MASLPFGLLQAPSQS----PRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDNEKIKIEIDESLFGS
        RKDKFDD+EKIKIEIDESLF S
Subjt:  RKDKFDDNEKIKIEIDESLFGS

A0A6J1DDL3 30S ribosomal protein S31, chloroplastic9.5e-4685Show/hide
Query:  MASLPFGLLQAPSQ----SPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        MASLPFGLLQA SQ    SPRFFSFSK E LGTSLRA STASLA S  SSPSS+PA+YCGRGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVPTPP+PP
Subjt:  MASLPFGLLQAPSQ----SPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDNEKIKIEIDESLF
        RKDKF+D+EKIKIEID+SLF
Subjt:  RKDKFDDNEKIKIEIDESLF

A0A6J1HRX4 30S ribosomal protein S31, chloroplastic1.1e-4180Show/hide
Query:  MASLPFGLLQA----PSQSPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        MASLPFGLLQA    P+ SPR FSFSK E LGTSLR S+      S  SSPSSIPA+YCGRGDKKTE+GKRF HS+GNARPRDKTKGRGTPRVPTPPSPP
Subjt:  MASLPFGLLQA----PSQSPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDNEKIKIEIDESLF
        RKDKFDD+EKIKIEIDESLF
Subjt:  RKDKFDDNEKIKIEIDESLF

SwissProt top hitse value%identityAlignment
O80439 30S ribosomal protein S31, chloroplastic2.1e-2664.65Show/hide
Query:  SFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS
        S S  E  G SL +  T   ++ST SS SSIP +YCGRGD+KT +GKRFNHS+GNARPR+K+KGRG  RVP PP+PPRKDKF+++EKIKI+IDESLF +
Subjt:  SFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS

P47909 30S ribosomal protein S31, mitochondrial3.5e-0555.56Show/hide
Query:  PSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARP-RDKTKGRGTPRVPTPPSPP
        P   +   A+ CGRGDKKT+RGKRF  SYGNARP R+K   R   RV  P S P
Subjt:  PSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARP-RDKTKGRGTPRVPTPPSPP

P47910 30S ribosomal protein S31, chloroplastic1.4e-1450.48Show/hide
Query:  MASLPFGLLQAPSQSPR--FFSFSKCEAL-GTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPR
        MASL   LL  PS +     FSFS  +++ G SL +  T SL+ S  +SP ++P IYCGRGD+KT +GKRFNHS+GNARP++K KGRG P+ P  P    
Subjt:  MASLPFGLLQAPSQSPR--FFSFSKCEAL-GTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPR

Query:  KDKFD
          K D
Subjt:  KDKFD

Arabidopsis top hitse value%identityAlignment
AT2G38140.1 plastid-specific ribosomal protein 41.5e-2764.65Show/hide
Query:  SFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS
        S S  E  G SL +  T   ++ST SS SSIP +YCGRGD+KT +GKRFNHS+GNARPR+K+KGRG  RVP PP+PPRKDKF+++EKIKI+IDESLF +
Subjt:  SFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTCTTCCTTTCGGACTTCTTCAGGCTCCATCTCAATCTCCTCGTTTCTTCTCTTTCTCCAAATGTGAAGCCCTAGGAACATCTCTTCGTGCTTCTTCTACCGC
TTCTCTTGCAATCTCTACACCTTCATCTCCTTCTTCAATTCCTGCTATATATTGTGGCAGAGGCGATAAGAAAACGGAGAGAGGAAAGCGGTTCAATCATTCGTATGGAA
ATGCAAGGCCTCGGGACAAGACCAAGGGGAGAGGGACTCCGAGAGTACCAACTCCTCCTTCTCCGCCTAGGAAGGATAAATTTGACGACAATGAGAAAATCAAGATCGAG
ATTGACGAGTCTCTTTTTGGTAGCTAG
mRNA sequenceShow/hide mRNA sequence
ACTCGAAACTTATCTTTGTGATTCTCCCACAAGCGCTACCTCGCTCTGCTTCATCTTCATCCATCCATGGCGTCTCTTCCTTTCGGACTTCTTCAGGCTCCATCTCAATC
TCCTCGTTTCTTCTCTTTCTCCAAATGTGAAGCCCTAGGAACATCTCTTCGTGCTTCTTCTACCGCTTCTCTTGCAATCTCTACACCTTCATCTCCTTCTTCAATTCCTG
CTATATATTGTGGCAGAGGCGATAAGAAAACGGAGAGAGGAAAGCGGTTCAATCATTCGTATGGAAATGCAAGGCCTCGGGACAAGACCAAGGGGAGAGGGACTCCGAGA
GTACCAACTCCTCCTTCTCCGCCTAGGAAGGATAAATTTGACGACAATGAGAAAATCAAGATCGAGATTGACGAGTCTCTTTTTGGTAGCTAGTCATAGGTCATCCTAAT
TCTGTTTATTTGAATGTGTTTTCTTAATTCAGAAGGTACTTCCACTTCTTCTAATAGCATTATTTTTGTATGAATTCTTCAGTCGCTTATCGGCTTCATGAATTTGTTCT
TCGTTTTGAGTCAACTCCAAGTACGGCCTCTCTCTCTTTTTCCTTCTATCTTTGTCTTTAACCATTTCTGAGCAAGAGTCTAAGCATCGATGCTTCATAGATAGTCATTG
CGTCACTACAGGCGTTTGTTTATGGAATTTAAGTTAACTTCCGCATACATGTTATTCGAAGACTAGAGTTGAGCTATTTAATATTAACGTTAGATATAGAAAGATTCTAC
CAGCTCCTTGTTGGTTTT
Protein sequenceShow/hide protein sequence
MASLPFGLLQAPSQSPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIE
IDESLFGS