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CSPI04G15980 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G15980
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionlate embryogenesis abundant protein B19.1A
Genome locationChr4:13319775..13321103
RNA-Seq ExpressionCSPI04G15980
SyntenyCSPI04G15980
Gene Ontology termsGO:0009737 - response to abscisic acid (biological process)
GO:0048700 - acquisition of desiccation tolerance in seed (biological process)
InterPro domainsIPR000389 - Small hydrophilic plant seed protein
IPR038956 - Late embryogenesis abundant protein, LEA_5 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033764.1 Em-like protein GEA1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-3693.41Show/hide
Query:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK
        MSSEQER +LDARARQGETV+PGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSN+GM GGERAAEEGVEIDESKFR K
Subjt:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK

XP_004148611.1 protein EMB-1 [Cucumis sativus]5.6e-40100Show/hide
Query:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK
        MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK
Subjt:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK

XP_008464209.1 PREDICTED: protein EMB-1-like [Cucumis melo]5.2e-3895.6Show/hide
Query:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK
        MSSEQERG+LDARARQGETV+PGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKF  K
Subjt:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK

XP_022144068.1 protein EMB-1-like [Momordica charantia]5.8e-3793.41Show/hide
Query:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK
        MSSEQER +LDARARQGETV+PGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MGRKGGLSNTG+SGGERAAEEGVEIDESKFR K
Subjt:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK

XP_022949998.1 protein EMB-1 [Cucurbita moschata]2.2e-3693.41Show/hide
Query:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK
        MSSEQER +LDARARQGETV+PGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSN+GM GGERAAEEGVEIDESKFR K
Subjt:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK

TrEMBL top hitse value%identityAlignment
A0A0A0KY00 Uncharacterized protein2.7e-40100Show/hide
Query:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK
        MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK
Subjt:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK

A0A1S3CKY4 protein EMB-1-like2.5e-3895.6Show/hide
Query:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK
        MSSEQERG+LDARARQGETV+PGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKF  K
Subjt:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK

A0A5D3E041 Protein EMB-1-like2.5e-3895.6Show/hide
Query:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK
        MSSEQERG+LDARARQGETV+PGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKF  K
Subjt:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK

A0A6J1CSC5 protein EMB-1-like2.8e-3793.41Show/hide
Query:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK
        MSSEQER +LDARARQGETV+PGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MGRKGGLSNTG+SGGERAAEEGVEIDESKFR K
Subjt:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK

A0A6J1ISS4 protein EMB-11.1e-3693.41Show/hide
Query:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK
        MSSEQER +LDARARQGETV+PGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSN+GM GGERAAEEGVEIDESKFR K
Subjt:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK

SwissProt top hitse value%identityAlignment
P17639 Protein EMB-12.1e-3481.32Show/hide
Query:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK
        M+S+QE+ +LDARARQGETV+PGGTGGKSLEAQ+HLAEGRS+GGQTRKEQLG EGY EMGRKGGLSN  MSGGERA +EG++IDESKFR K
Subjt:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK

P42755 Em protein H51.7e-3177.78Show/hide
Query:  SSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK
        S +QER +LD  AR+GETV+PGGTGGKSLEAQEHLA+GRSRGG+TRKEQLG EGY+EMGRKGGLS    SGGERAA EG+EIDESKF+ K
Subjt:  SSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK

Q02973 Em-like protein GEA63.8e-3176.92Show/hide
Query:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK
        M+S+QE+ +LD RA++GETV+PGGTGGKS EAQ+HLAEGRSRGGQTRKEQLG EGYQ+MGRKGGLS     GGE A EEGVEIDESKFR K
Subjt:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK

Q05190 Late embryogenesis abundant protein B19.1A1.1e-3074.44Show/hide
Query:  SSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK
        S +QER +LD +AR+GETV+PGGTGGKSLEAQ++LAEGRSRGGQTR+EQ+G EGY EMGRKGGLS+   SGGERAA EG++IDESKF+ K
Subjt:  SSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK

Q40864 Em-like protein1.9e-3075.56Show/hide
Query:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRN
        M  +Q+R +LDA+AR+GETV+PGGTGGKSL+AQE LAEGRSRGGQTRKEQ+G EGYQEMGRKGGLS+ G  GGERA+EEG  IDESK+R+
Subjt:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRN

Arabidopsis top hitse value%identityAlignment
AT2G40170.1 Stress induced protein2.7e-3276.92Show/hide
Query:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK
        M+S+QE+ +LD RA++GETV+PGGTGGKS EAQ+HLAEGRSRGGQTRKEQLG EGYQ+MGRKGGLS     GGE A EEGVEIDESKFR K
Subjt:  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK

AT3G51810.1 Stress induced protein1.2e-2447.33Show/hide
Query:  SSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ--------------------------------------------
        S +  R +LD +A+QGETV+PGGTGG SLEAQEHLAEGRS+GGQTRKEQLGHEGYQ                                            
Subjt:  SSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ--------------------------------------------

Query:  ----------------EMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK
                        EMGRKGGLS    SGGERA EEG+EIDESKF NK
Subjt:  ----------------EMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCGGAGCAGGAAAGAGGTAAACTCGACGCCAGGGCCAGGCAAGGGGAGACTGTCATCCCCGGTGGAACTGGAGGCAAGAGTCTTGAAGCTCAGGAGCACCTTGC
TGAAGGGCGGAGCCGTGGGGGCCAAACAAGGAAGGAGCAGCTGGGACACGAAGGATACCAAGAGATGGGCCGTAAAGGAGGGCTAAGCAACACAGGTATGTCTGGAGGAG
AACGTGCTGCTGAGGAAGGTGTTGAGATTGACGAATCCAAGTTCAGGAATAAATAA
mRNA sequenceShow/hide mRNA sequence
ATTCTGTTGGTCAAAGCTTAAGTATTTGGAAAAGAGATGTCGTCGGAGCAGGAAAGAGGTAAACTCGACGCCAGGGCCAGGCAAGGGGAGACTGTCATCCCCGGTGGAAC
TGGAGGCAAGAGTCTTGAAGCTCAGGAGCACCTTGCTGAAGGGCGGAGCCGTGGGGGCCAAACAAGGAAGGAGCAGCTGGGACACGAAGGATACCAAGAGATGGGCCGTA
AAGGAGGGCTAAGCAACACAGGTATGTCTGGAGGAGAACGTGCTGCTGAGGAAGGTGTTGAGATTGACGAATCCAAGTTCAGGAATAAATAAAAAATACAAAAACCACCC
TTTCACAATGTGTCTTCAATCTAAACTTCTATGTTCCATTTTCATCTTTAGTTTCTTTTTTTTGTTTTTTTAGTTTCTACTTTCCCTAAAAGTGTCTAGAATAAATAATT
GTATTTCAAGGCTTTATAGCCTACTTCAGGTCTGTATATCGATGTTTCTGCCTTGAGTGAGCAGTTAAAGTCGGTCTTTTTCTAGTGTATCTGCCTAAAAATGCCACATA
TGGCTAAACATAAGGGATATGGATATGCATATCTTTATTGAGGATGGTTAAAATGAAACATTCCCAAAATGAGTAAATGTCTCAAGCAAAACAGGGTTGGTTGGTTGTAT
GGAATAAGAGGTATGCATTATGAACCTATTGCAT
Protein sequenceShow/hide protein sequence
MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRNK