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CSPI04G16220 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G16220
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDihydrolipoamide acetyltransferase
Genome locationChr4:13513985..13514944
RNA-Seq ExpressionCSPI04G16220
SyntenyCSPI04G16220
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0043229 - intracellular organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7825488.1 hypothetical protein G2W53_016652 [Senna tora]8.0e-0942.75Show/hide
Query:  RNGHNILSAGRSGARGGGGGGGGGSASEDTEKPSRINFLL-IQEQIIGRSESTVSADDGETGGESRNKNRSNAGEKNNTGGENNEANQDLAISEVATKQN
        R+G N    G      GG    G SA+E+ +KPS +  LL IQEQI G  E T+S + G    ESRNKNRS+ G+K++  GE  +  Q   I E ATK +
Subjt:  RNGHNILSAGRSGARGGGGGGGGGSASEDTEKPSRINFLL-IQEQIIGRSESTVSADDGETGGESRNKNRSNAGEKNNTGGENNEANQDLAISEVATKQN

Query:  KRLIGGAEEIEEDPRAKKGDQEEERGRIGEK
        +RLI G EE+EE PR ++  + ++  RI E+
Subjt:  KRLIGGAEEIEEDPRAKKGDQEEERGRIGEK

OMO97635.1 hypothetical protein COLO4_14452 [Corchorus olitorius]1.3e-1145.13Show/hide
Query:  GGGGGGGSASEDTEKPSRINFLLIQEQIIGRSESTVSADDGETGGESRNKNRSNAGEKNNTGGENNEANQDLAISEVATKQNKRLIGGAEEIEEDPRAKK
        G GG GGS +++ ++      LLIQE+I+   E T+S D+ ++  ES NK RSN GE++N   + +E  + LA+ E A + +KRLI  AEEIE+DPRA K
Subjt:  GGGGGGGSASEDTEKPSRINFLLIQEQIIGRSESTVSADDGETGGESRNKNRSNAGEKNNTGGENNEANQDLAISEVATKQNKRLIGGAEEIEEDPRAKK

Query:  GDQEEERGRIGEK
          +EE+R  +GEK
Subjt:  GDQEEERGRIGEK

THU52266.1 hypothetical protein C4D60_Mb10t02160 [Musa balbisiana]3.0e-0838.14Show/hide
Query:  ARGGGGGGGGGSASEDTEKP-SRINFLLIQEQIIGRSESTVSADDGETGGESRNKNRSNAGEKNNTGGENNEANQDLAISEVATKQNKRLIGGAEEIEED
        ARGG GGGGGGS++E+ ++P     FLL++EQI+  +E  V  DDG       + + SN GE+++   E +EA + LAI E   ++N+  +GGA+++E  
Subjt:  ARGGGGGGGGGSASEDTEKP-SRINFLLIQEQIIGRSESTVSADDGETGGESRNKNRSNAGEKNNTGGENNEANQDLAISEVATKQNKRLIGGAEEIEED

Query:  PRAKKGDQEEERGRIGEK
        P  ++G+Q++E   +G++
Subjt:  PRAKKGDQEEERGRIGEK

TKY63567.1 CCR4-associated factor 1 [Spatholobus suberectus]1.6e-1242.28Show/hide
Query:  SAGRSGARGGGGGGGGGSASEDTEKPSRINFLLIQEQIIGRSESTVSADDGETGGESRNKNRSNAGEKNNTGGENNEANQDLAISEVATKQNKRLIGGAE
        +A  +G  GG GGGGGGSA E  E       L+++EQI+G +E  V A+DG+T  ES ++NR+N GE+N+  GE  E ++   I E + ++++RL+ GAE
Subjt:  SAGRSGARGGGGGGGGGSASEDTEKPSRINFLLIQEQIIGRSESTVSADDGETGGESRNKNRSNAGEKNNTGGENNEANQDLAISEVATKQNKRLIGGAE

Query:  EIEEDPRAKKGDQEEERGRIGEK
        E++E P  ++ ++E+E  RIGE+
Subjt:  EIEEDPRAKKGDQEEERGRIGEK

TXG58898.1 hypothetical protein EZV62_016727 [Acer yangbiense]7.5e-0739.13Show/hide
Query:  LLIQEQIIGRSESTVSADDGETGGESRNKNRSNAGEKNNTGGENNEANQDLAISEVATKQNKRLIGGAEEIEEDPRAKKGDQEEERGRIGEK
        LL++EQ++   +STVSA++G++  ESR+++ S+AGE+++   E+++  + LA++E   + ++RL+  AEEIEE+P  K+  + EER R+G++
Subjt:  LLIQEQIIGRSESTVSADDGETGGESRNKNRSNAGEKNNTGGENNEANQDLAISEVATKQNKRLIGGAEEIEEDPRAKKGDQEEERGRIGEK

TrEMBL top hitse value%identityAlignment
A0A0A0L017 Uncharacterized protein2.2e-6598.61Show/hide
Query:  MNKSNEHTCVFNFRNGHNILSAGRSGAR-GGGGGGGGGSASEDTEKPSRINFLLIQEQIIGRSESTVSADDGETGGESRNKNRSNAGEKNNTGGENNEAN
        MNKSNEHTCVFNFRNGHNILSAGRSGAR GGGGGGGGGSASEDTEKPSRINFLLIQEQIIGRSESTVSADDGETGGESRNKNRSNAGEKNNTGGENNE N
Subjt:  MNKSNEHTCVFNFRNGHNILSAGRSGAR-GGGGGGGGGSASEDTEKPSRINFLLIQEQIIGRSESTVSADDGETGGESRNKNRSNAGEKNNTGGENNEAN

Query:  QDLAISEVATKQNKRLIGGAEEIEEDPRAKKGDQEEERGRIGEK
        QDLAISEVATKQNKRLIGGAEEIEEDPRAKKGDQEEERGRIGEK
Subjt:  QDLAISEVATKQNKRLIGGAEEIEEDPRAKKGDQEEERGRIGEK

A0A1R3JS19 Uncharacterized protein6.4e-1245.13Show/hide
Query:  GGGGGGGSASEDTEKPSRINFLLIQEQIIGRSESTVSADDGETGGESRNKNRSNAGEKNNTGGENNEANQDLAISEVATKQNKRLIGGAEEIEEDPRAKK
        G GG GGS +++ ++      LLIQE+I+   E T+S D+ ++  ES NK RSN GE++N   + +E  + LA+ E A + +KRLI  AEEIE+DPRA K
Subjt:  GGGGGGGSASEDTEKPSRINFLLIQEQIIGRSESTVSADDGETGGESRNKNRSNAGEKNNTGGENNEANQDLAISEVATKQNKRLIGGAEEIEEDPRAKK

Query:  GDQEEERGRIGEK
          +EE+R  +GEK
Subjt:  GDQEEERGRIGEK

A0A4V4H4H7 Uncharacterized protein1.5e-0838.14Show/hide
Query:  ARGGGGGGGGGSASEDTEKP-SRINFLLIQEQIIGRSESTVSADDGETGGESRNKNRSNAGEKNNTGGENNEANQDLAISEVATKQNKRLIGGAEEIEED
        ARGG GGGGGGS++E+ ++P     FLL++EQI+  +E  V  DDG       + + SN GE+++   E +EA + LAI E   ++N+  +GGA+++E  
Subjt:  ARGGGGGGGGGSASEDTEKP-SRINFLLIQEQIIGRSESTVSADDGETGGESRNKNRSNAGEKNNTGGENNEANQDLAISEVATKQNKRLIGGAEEIEED

Query:  PRAKKGDQEEERGRIGEK
        P  ++G+Q++E   +G++
Subjt:  PRAKKGDQEEERGRIGEK

A0A5A7RKP0 Dihydrolipoamide acetyltransferase4.9e-0444Show/hide
Query:  DDGETGGESRNKNRSNAGEKNNTGGENNEANQDLAISEVATKQNKRLIGGAEEIEEDPRAKKGDQEEERGRIGEK
        D  +T  +S  + RS+ GE+N+  G +++  QDLA+ E A  ++ RLI GAE+++EDPR ++G+Q+E+R R+GEK
Subjt:  DDGETGGESRNKNRSNAGEKNNTGGENNEANQDLAISEVATKQNKRLIGGAEEIEEDPRAKKGDQEEERGRIGEK

A0A5C7HQ61 Uncharacterized protein3.6e-0739.13Show/hide
Query:  LLIQEQIIGRSESTVSADDGETGGESRNKNRSNAGEKNNTGGENNEANQDLAISEVATKQNKRLIGGAEEIEEDPRAKKGDQEEERGRIGEK
        LL++EQ++   +STVSA++G++  ESR+++ S+AGE+++   E+++  + LA++E   + ++RL+  AEEIEE+P  K+  + EER R+G++
Subjt:  LLIQEQIIGRSESTVSADDGETGGESRNKNRSNAGEKNNTGGENNEANQDLAISEVATKQNKRLIGGAEEIEEDPRAKKGDQEEERGRIGEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAATCAAATGAACACACATGTGTATTCAATTTTCGGAATGGTCACAATATTTTATCTGCCGGAAGGAGCGGCGCCAGAGGAGGAGGAGGAGGAGGAGGAGGAGG
GAGCGCCAGCGAAGATACCGAGAAACCCAGTCGTATTAACTTCCTGCTCATCCAGGAACAGATCATCGGGAGATCGGAGAGCACCGTGAGCGCAGACGACGGCGAAACCG
GCGGTGAAAGCAGAAACAAGAACAGATCCAACGCTGGTGAGAAAAACAACACAGGCGGTGAAAACAACGAGGCCAATCAAGATCTCGCTATCTCTGAAGTGGCGACCAAA
CAGAACAAGCGGCTGATCGGAGGGGCGGAAGAGATAGAGGAAGATCCAAGAGCAAAGAAGGGCGATCAAGAGGAAGAGAGAGGAAGGATTGGAGAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ACAAACTATTAACGTAAACATAAATGTGCAGCCTTAAAAATTAAAATCAAATTCCCCAACCAAATTTCAATCGAAGAAGAAGAATATTCAAACAAACAAAATAATAGAAT
GAACAAATCAAATGAACACACATGTGTATTCAATTTTCGGAATGGTCACAATATTTTATCTGCCGGAAGGAGCGGCGCCAGAGGAGGAGGAGGAGGAGGAGGAGGAGGGA
GCGCCAGCGAAGATACCGAGAAACCCAGTCGTATTAACTTCCTGCTCATCCAGGAACAGATCATCGGGAGATCGGAGAGCACCGTGAGCGCAGACGACGGCGAAACCGGC
GGTGAAAGCAGAAACAAGAACAGATCCAACGCTGGTGAGAAAAACAACACAGGCGGTGAAAACAACGAGGCCAATCAAGATCTCGCTATCTCTGAAGTGGCGACCAAACA
GAACAAGCGGCTGATCGGAGGGGCGGAAGAGATAGAGGAAGATCCAAGAGCAAAGAAGGGCGATCAAGAGGAAGAGAGAGGAAGGATTGGAGAAAAGTGAAATGGCAAGA
ATTAGGGCTATGATGGTGAAATAATTGACGCGGAAATAGGAGTAGTTCTTGCGGATGCGGAGAGTGGCTTCGGAGAGGGATTCAGGCTTGGAGAAGGCGGAGCGATCTAG
GAGCTCCGGCCAAGGGCGGCGACGGGAGAAGGCGTGGCGGAGGGAGAGGAGGAGATGGCTAGAGAAGGAAGAAAGGGGGATTTGAGGTTGGGATTGGGGATTGGAAATGG
GGAGGATGACCGGAGAAGCTGAGGACTGCATTGTGTGGAGGAAAGGGAAATGGGAAAAGTAAGAAGGAATTTGGTTGGTTTATAAGTGGGCGGAATGTATGGAGTTGCAC
GGAAGGGTGGCCGGAAATTGAGGGAAAGGAGGCGCCAGAGGGAAGATACTCAAAAATCGGTTTCCACTTTTTCTTTCTTC
Protein sequenceShow/hide protein sequence
MNKSNEHTCVFNFRNGHNILSAGRSGARGGGGGGGGGSASEDTEKPSRINFLLIQEQIIGRSESTVSADDGETGGESRNKNRSNAGEKNNTGGENNEANQDLAISEVATK
QNKRLIGGAEEIEEDPRAKKGDQEEERGRIGEK