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CSPI04G16470 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G16470
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
Genome locationChr4:13829433..13830437
RNA-Seq ExpressionCSPI04G16470
SyntenyCSPI04G16470
Gene Ontology termsGO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0070918 - production of small RNA involved in gene silencing by RNA (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsIPR007523 - NDUFAF3/Mth938 domain-containing protein
IPR036748 - MTH938-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637205.1 hypothetical protein CSA_004607 [Cucumis sativus]6.0e-4376.19Show/hide
Query:  RRKPGFNQPLPSLRRAFSLYDQINLIDNVPEDQLRFQ-----------------------------RYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFS
        RRKPGF+QPLPSLRRAFSLYDQINLIDNVPEDQLRFQ                             RYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFS
Subjt:  RRKPGFNQPLPSLRRAFSLYDQINLIDNVPEDQLRFQ-----------------------------RYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFS

Query:  EITSDRFALHFLFLTYNTQFTSFVLF
        EITSDRFALHFLFLTYNTQFTSFVLF
Subjt:  EITSDRFALHFLFLTYNTQFTSFVLF

KAE8650668.1 hypothetical protein Csa_011092, partial [Cucumis sativus]6.4e-5365.96Show/hide
Query:  RKAAVRVQICRRPDLHRKTASLPFCRCPIQICVAVHSLTAAATVSASCSVSVEAEPPCEAVTATSAAHNRRPPIPSPPLSALPRRKPGFNQPLPSLRRAF
        R AAV++   R P        LPF  CP+QIC          TV ASCSVSVEAEPPCEAVTATSAAHNRRPPIPSPPLSALPRRKPGF+QP   + RAF
Subjt:  RKAAVRVQICRRPDLHRKTASLPFCRCPIQICVAVHSLTAAATVSASCSVSVEAEPPCEAVTATSAAHNRRPPIPSPPLSALPRRKPGFNQPLPSLRRAF

Query:  SLYDQINLIDNVPEDQLRFQ-----------------------------RYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSD
        SLYDQINLIDNVPEDQLRFQ                             RYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSD
Subjt:  SLYDQINLIDNVPEDQLRFQ-----------------------------RYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSD

KGN51474.2 hypothetical protein Csa_008783 [Cucumis sativus]6.6e-5858.73Show/hide
Query:  PPSLP--QPVASPLLKPSAATLLLFSSVRKAAVRV----------QICR-RPDLHRKTAS-----LPFCRCPIQICVAVHSLTAAATVSASCSVSVEAEP
        P S+P   PV SP       +L   SSVR  A  +          Q  R RPDL    ++     LPF RCP+QIC          T+ ASCSVSVEAEP
Subjt:  PPSLP--QPVASPLLKPSAATLLLFSSVRKAAVRV----------QICR-RPDLHRKTAS-----LPFCRCPIQICVAVHSLTAAATVSASCSVSVEAEP

Query:  PCEAVTATSAAHNRRPPIPSPPLSALPRRKPGFNQPLPSLRRAFSLYDQINLIDNVPEDQLRFQ-----------------------------RYTETGF
        PCEAVTATSAAHNRRPPIPSPPLSALPRRKPGF+QPL SLRRAFSLYDQINLIDNVP+DQLRFQ                             RYTETGF
Subjt:  PCEAVTATSAAHNRRPPIPSPPLSALPRRKPGFNQPLPSLRRAFSLYDQINLIDNVPEDQLRFQ-----------------------------RYTETGF

Query:  TVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFALHFLFLTYNTQFTSFVL
        TVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFA    FL  N Q++ + L
Subjt:  TVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFALHFLFLTYNTQFTSFVL

XP_031737544.1 uncharacterized protein LOC116402433 [Cucumis sativus]2.3e-7180.77Show/hide
Query:  RKAAVRVQICRRPDLHRKTASLPFCRCPIQICVAVHSLTAAATVSASCSVSVEAEPPCEAVTATSAAHNRRPPIPSPPLSALPRRKPGFNQPLPSLRRAF
        R AAV++   R P        LPF  CP+QIC          TV ASCSVSVEAEPPCEAVTATSAAHNRRPPIPSPPLSALPRRKPGF+QP   + RAF
Subjt:  RKAAVRVQICRRPDLHRKTASLPFCRCPIQICVAVHSLTAAATVSASCSVSVEAEPPCEAVTATSAAHNRRPPIPSPPLSALPRRKPGFNQPLPSLRRAF

Query:  SLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFALHFLFLTYNTQFTSFVLFGD
        SLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFALHFLFLTYNTQFTSFVLFGD
Subjt:  SLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFALHFLFLTYNTQFTSFVLFGD

XP_031741741.1 extensin-like [Cucumis sativus]1.5e-6266.37Show/hide
Query:  PPSLP--QPVASPLLKPSAATLLLFSSVRKAAVRV----------QICR-RPDLHRKTAS-----LPFCRCPIQICVAVHSLTAAATVSASCSVSVEAEP
        P S+P   PV SP       +L   SSVR  A  +          Q  R RPDL    ++     LPF RCP+QIC          T+ ASCSVSVEAEP
Subjt:  PPSLP--QPVASPLLKPSAATLLLFSSVRKAAVRV----------QICR-RPDLHRKTAS-----LPFCRCPIQICVAVHSLTAAATVSASCSVSVEAEP

Query:  PCEAVTATSAAHNRRPPIPSPPLSALPRRKPGFNQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEI
        PCEAVTATSAAHNRRPPIPSPPLSALPRRKPGF+QPL SLRRAFSLYDQINLIDNVP+DQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEI
Subjt:  PCEAVTATSAAHNRRPPIPSPPLSALPRRKPGFNQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEI

Query:  TSDRFALHFLFLTYNTQFTSFVL
        TSDRFA    FL  N Q++ + L
Subjt:  TSDRFALHFLFLTYNTQFTSFVL

TrEMBL top hitse value%identityAlignment
A0A1S3CB84 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 31.9e-3490Show/hide
Query:  RRKPGFNQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFAL
        RRKPGF+QPLPSLRRAFSLYDQINLIDNVP+DQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSW+PKKFSEIT D  ++
Subjt:  RRKPGFNQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFAL

A0A5A7TES8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 31.9e-3490Show/hide
Query:  RRKPGFNQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFAL
        RRKPGF+QPLPSLRRAFSLYDQINLIDNVP+DQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSW+PKKFSEIT D  ++
Subjt:  RRKPGFNQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFAL

A0A5D3DLM8 NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex assembly factor 3-like1.9e-3490Show/hide
Query:  RRKPGFNQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFAL
        RRKPGF+QPLPSLRRAFSLYDQINLIDNVP+DQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSW+PKKFSEIT D  ++
Subjt:  RRKPGFNQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFAL

A0A6J1DND7 LOW QUALITY PROTEIN: uncharacterized protein LOC1110228182.7e-3383.91Show/hide
Query:  RRKPGFNQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFALHFLFLTY
        RR+PG +QPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSW+P+KFSEIT++      LFLT+
Subjt:  RRKPGFNQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFALHFLFLTY

A0A6J1HIQ3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 34.6e-3386.25Show/hide
Query:  RRKPGFNQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFAL
        RR+PG +QPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNG+DYEGSLLCVGNLLMSW+PKKFSEIT +  ++
Subjt:  RRKPGFNQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G44525.1 Protein of unknown function (DUF498/DUF598)4.7e-3079.73Show/hide
Query:  NQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFAL
        N  LPSLRRAFSLYDQINLIDNVPEDQLRFQ + +T FTVNGV YEGSLLCVGNLLMSW+P+KFSEIT+D  ++
Subjt:  NQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFAL

AT3G60150.1 Protein of unknown function (DUF498/DUF598)8.9e-2980.28Show/hide
Query:  LPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFAL
        LPSLRRAFSLYDQINLIDNVPEDQLRFQ + ET FTVNGV YEGSLLCVGNLLMSW+P+ FS+IT+D  ++
Subjt:  LPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACCGCAACCGCCGCGCCTCTTCTCCTTCCTCCGGTACGCCGCGACGACTCCACCGTCCCTGCCGCAACCCGTCGCGTCTCCCCTACTGAAGCCGAGCGCCGCGAC
CCTTCTCCTCTTCTCTTCAGTTCGCAAAGCAGCCGTACGCGTCCAGATCTGCCGCCGTCCAGATCTGCACCGCAAGACCGCGTCGTTGCCCTTCTGCCGCTGCCCGATCC
AGATTTGCGTCGCTGTGCACAGCCTCACCGCCGCTGCAACCGTTTCCGCGTCTTGTTCTGTTTCCGTCGAAGCCGAGCCACCGTGTGAAGCAGTAACCGCCACGTCCGCC
GCTCACAACCGCCGTCCACCGATCCCTTCTCCTCCGTTGTCTGCACTGCCGCGCCGGAAGCCTGGTTTCAACCAGCCTCTGCCGTCGTTGAGACGTGCCTTTTCACTTTA
CGATCAGATCAATCTCATCGACAATGTCCCTGAAGATCAGCTTCGTTTTCAACGGTATACTGAGACGGGGTTCACTGTGAATGGAGTGGATTATGAGGGCAGCTTGCTTT
GTGTTGGGAATTTGTTGATGTCTTGGACTCCTAAGAAATTTTCGGAAATTACGTCTGATAGGTTTGCTTTGCATTTCTTGTTCCTAACTTACAATACTCAATTTACTTCC
TTTGTTCTTTTTGGTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACACCGCAACCGCCGCGCCTCTTCTCCTTCCTCCGGTACGCCGCGACGACTCCACCGTCCCTGCCGCAACCCGTCGCGTCTCCCCTACTGAAGCCGAGCGCCGCGAC
CCTTCTCCTCTTCTCTTCAGTTCGCAAAGCAGCCGTACGCGTCCAGATCTGCCGCCGTCCAGATCTGCACCGCAAGACCGCGTCGTTGCCCTTCTGCCGCTGCCCGATCC
AGATTTGCGTCGCTGTGCACAGCCTCACCGCCGCTGCAACCGTTTCCGCGTCTTGTTCTGTTTCCGTCGAAGCCGAGCCACCGTGTGAAGCAGTAACCGCCACGTCCGCC
GCTCACAACCGCCGTCCACCGATCCCTTCTCCTCCGTTGTCTGCACTGCCGCGCCGGAAGCCTGGTTTCAACCAGCCTCTGCCGTCGTTGAGACGTGCCTTTTCACTTTA
CGATCAGATCAATCTCATCGACAATGTCCCTGAAGATCAGCTTCGTTTTCAACGGTATACTGAGACGGGGTTCACTGTGAATGGAGTGGATTATGAGGGCAGCTTGCTTT
GTGTTGGGAATTTGTTGATGTCTTGGACTCCTAAGAAATTTTCGGAAATTACGTCTGATAGGTTTGCTTTGCATTTCTTGTTCCTAACTTACAATACTCAATTTACTTCC
TTTGTTCTTTTTGGTGATTGA
Protein sequenceShow/hide protein sequence
MTPQPPRLFSFLRYAATTPPSLPQPVASPLLKPSAATLLLFSSVRKAAVRVQICRRPDLHRKTASLPFCRCPIQICVAVHSLTAAATVSASCSVSVEAEPPCEAVTATSA
AHNRRPPIPSPPLSALPRRKPGFNQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDRFALHFLFLTYNTQFTS
FVLFGD