| GenBank top hits | e value | %identity | Alignment |
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| KGN54745.2 hypothetical protein Csa_012761 [Cucumis sativus] | 5.5e-161 | 87.76 | Show/hide |
Query: MSTAACLPSSSKPRPVVTAVPTSEN-----------------------------------------SSNVLSTLSSKIKDVGRAFVSVWNPFKHEPTVNY
MSTAACLPSSSKPRPVVTAVPTSEN SSNVLSTLSSKIKDVGRAFVSVWNPFKHEPTVNY
Subjt: MSTAACLPSSSKPRPVVTAVPTSEN-----------------------------------------SSNVLSTLSSKIKDVGRAFVSVWNPFKHEPTVNY
Query: AFLALISGFIRRGLIEQTDLYRIANQIQVSEGRMGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPW
AFLALISGFIRRGLIEQTDLYRIANQIQVSEGRMGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPW
Subjt: AFLALISGFIRRGLIEQTDLYRIANQIQVSEGRMGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPW
Query: LNLTKDQGGSYIFEFKNFSDLHVCRELVGSALAKLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLE
LNLTKDQGGSYIFEFKNFSDLHVCRELVGSALAKLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLE
Subjt: LNLTKDQGGSYIFEFKNFSDLHVCRELVGSALAKLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLE
Query: RDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQ
+DNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQ
Subjt: RDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQ
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| XP_008457278.1 PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [Cucumis melo] | 5.6e-113 | 98.57 | Show/hide |
Query: MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALA
MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRE VGSALA
Subjt: MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALA
Query: KLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
KLGEAAQAPSERPVAAFPHEQLSK EMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD+SKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
Subjt: KLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
Query: FNLTPEIKYQ
FNLTPEIKYQ
Subjt: FNLTPEIKYQ
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| XP_011653743.1 general transcription and DNA repair factor IIH subunit TFB1-1 isoform X2 [Cucumis sativus] | 3.0e-114 | 99.52 | Show/hide |
Query: MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALA
MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALA
Subjt: MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALA
Query: KLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
KLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLE+DNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
Subjt: KLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
Query: FNLTPEIKYQ
FNLTPEIKYQ
Subjt: FNLTPEIKYQ
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| XP_031739948.1 general transcription and DNA repair factor IIH subunit TFB1-1 isoform X1 [Cucumis sativus] | 3.0e-114 | 99.52 | Show/hide |
Query: MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALA
MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALA
Subjt: MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALA
Query: KLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
KLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLE+DNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
Subjt: KLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
Query: FNLTPEIKYQ
FNLTPEIKYQ
Subjt: FNLTPEIKYQ
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| XP_038894194.1 general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X2 [Benincasa hispida] | 1.7e-109 | 95.71 | Show/hide |
Query: MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALA
MGTKYVHKSAKYKTS+KDPGTPGVLEMTE KF+FRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLT+DQGGS IFEFKNFSDLHVCRE VGSALA
Subjt: MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALA
Query: KLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
K GEAAQAP ERPVAAFPHEQLSK EMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
Subjt: KLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
Query: FNLTPEIKYQ
FNLTPEIKYQ
Subjt: FNLTPEIKYQ
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0A0KYD2 PH_TFIIH domain-containing protein | 8.6e-168 | 99.67 | Show/hide |
Query: MSTAACLPSSSKPRPVVTAVPTSENSSNVLSTLSSKIKDVGRAFVSVWNPFKHEPTVNYAFLALISGFIRRGLIEQTDLYRIANQIQVSEGRMGTKYVHK
MSTAACLPSSSKPRPVVTAVPTSENSSNVLSTLSSKIKDVGRAFVSVWNPFKHEPTVNYAFLALISGFIRRGLIEQTDLYRIANQIQVSEGRMGTKYVHK
Subjt: MSTAACLPSSSKPRPVVTAVPTSENSSNVLSTLSSKIKDVGRAFVSVWNPFKHEPTVNYAFLALISGFIRRGLIEQTDLYRIANQIQVSEGRMGTKYVHK
Query: SAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALAKLGEAAQA
SAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALAKLGEAAQA
Subjt: SAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALAKLGEAAQA
Query: PSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEIK
PSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLE+DNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEIK
Subjt: PSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEIK
Query: YQA
YQA
Subjt: YQA
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| A0A1S3C6E8 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 | 2.7e-113 | 98.57 | Show/hide |
Query: MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALA
MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRE VGSALA
Subjt: MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALA
Query: KLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
KLGEAAQAPSERPVAAFPHEQLSK EMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD+SKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
Subjt: KLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
Query: FNLTPEIKYQ
FNLTPEIKYQ
Subjt: FNLTPEIKYQ
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| A0A6J1DNY2 probable RNA polymerase II transcription factor B subunit 1-1 isoform X2 | 1.9e-106 | 92.86 | Show/hide |
Query: MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALA
MGTKYV KSAKYKTSVKDPGTPGVLEMTE KFVF+PSDPTSASKLDVEFR+IKGHKNTKEGSNKPPWLNLT+DQGGSYIFEFKNFSDLHVCRE VGSALA
Subjt: MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALA
Query: KLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
K GE AQA SER VA FPHEQLSKLEMELRM+CLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQL+GFK+SMVLDTKPMSDGRTNKVT
Subjt: KLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
Query: FNLTPEIKYQ
FNLTPEIKY+
Subjt: FNLTPEIKYQ
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| A0A6J1DRT9 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 | 1.9e-106 | 92.86 | Show/hide |
Query: MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALA
MGTKYV KSAKYKTSVKDPGTPGVLEMTE KFVF+PSDPTSASKLDVEFR+IKGHKNTKEGSNKPPWLNLT+DQGGSYIFEFKNFSDLHVCRE VGSALA
Subjt: MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALA
Query: KLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
K GE AQA SER VA FPHEQLSKLEMELRM+CLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQL+GFK+SMVLDTKPMSDGRTNKVT
Subjt: KLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
Query: FNLTPEIKYQ
FNLTPEIKY+
Subjt: FNLTPEIKYQ
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| A0A6J1IB04 probable RNA polymerase II transcription factor B subunit 1-1 | 3.2e-106 | 93.81 | Show/hide |
Query: MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALA
MGTKYV KSAKYKTSVKDPGTPGVLEMTE KFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLT+DQGGSYIFEFKNFSDLHVCRE VGSALA
Subjt: MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALA
Query: KLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
K GEA QAPSE+ VA FPHEQLSK EMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD S KSKQL+GFKSSMVLDTKPMSDGRTNKVT
Subjt: KLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVT
Query: FNLTPEIKYQ
FNLTPEIKYQ
Subjt: FNLTPEIKYQ
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P32780 General transcription factor IIH subunit 1 | 3.3e-07 | 31.01 | Show/hide |
Query: IKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALAKLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGG
IK K + EG K L L G + F F N S R+ V L +L + + + E+E + R LQED L +L+K V+
Subjt: IKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALAKLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGG
Query: VLTESEFWAARKKLLERDNSKKS--KQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEI
V++ EFWA R + D+S S KQ +G ++ + D +P +DG N + +NLT +I
Subjt: VLTESEFWAARKKLLERDNSKKS--KQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEI
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| Q3ECP0 General transcription and DNA repair factor IIH subunit TFB1-1 | 2.7e-57 | 56.59 | Show/hide |
Query: VHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALAKLGEA
+ K KYK++VKDPGTPG L + E +F P+DP S SKL V + IK K TKEGSNKPPWLNLT Q S+IFEF+N+ D+H CR+ + ALAK
Subjt: VHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALAKLGEA
Query: AQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLTP
+ + V + EQLS E+ELR + L+E+SELQ+LHKQFV VLTE EFWA RKKLL +D+ +KSKQ +G KS MV KP +DGRTN+VTFNLTP
Subjt: AQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLTP
Query: EIKYQ
EI +Q
Subjt: EIKYQ
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| Q55FP1 General transcription factor IIH subunit 1 | 1.5e-07 | 34.44 | Show/hide |
Query: LSKLEMELRMRCLQEDSELQKLHKQFV-IGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQ
LS+ +++ R+ LQ + EL++L++Q V V++ES+FW +RK +L+ D+++ KQ G S+++ D +P S+ N V + TP + +Q
Subjt: LSKLEMELRMRCLQEDSELQKLHKQFV-IGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQ
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| Q9DBA9 General transcription factor IIH subunit 1 | 2.5e-07 | 31.21 | Show/hide |
Query: IKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALAKLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGG
IK K + EG K L L G + F F N S R+ V L +L + + + E+E + R LQED L +L+K V+
Subjt: IKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALAKLGEAAQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGG
Query: VLTESEFWAARKKLLERDNSKKS-KQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEI
V++ EFWA R + D+S S KQ +G ++ + D +P +DG N + +NLT +I
Subjt: VLTESEFWAARKKLLERDNSKKS-KQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEI
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| Q9M322 General transcription and DNA repair factor IIH subunit TFB1-3 | 7.8e-57 | 57.07 | Show/hide |
Query: VHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALAKLGEA
+ K KYK+ VKDPGT G LE++E +F P+DP S KL V+ IK K TKEGSNKPPWLNLT QG S+IFEF+N+ D+H CR+ + ALAK E
Subjt: VHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALAKLGEA
Query: AQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLTP
+ V P EQLS E ELR + L+E+SELQKLHKQFV VLTE EFW+ RKKLL +D+ +KSKQ +G KS MV KP +DGRTN+VTFNLT
Subjt: AQAPSERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLTP
Query: EIKYQ
EI +Q
Subjt: EIKYQ
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