; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G17110 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G17110
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDNA repair protein recA-like protein 2
Genome locationChr4:14535049..14541118
RNA-Seq ExpressionCSPI04G17110
SyntenyCSPI04G17110
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008094 - DNA-dependent ATPase activity (molecular function)
InterPro domainsIPR013765 - DNA recombination and repair protein RecA
IPR020588 - DNA recombination and repair protein RecA-like, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK04280.1 DNA repair protein recA-like protein 2 [Cucumis melo var. makuwa]6.9e-6789.4Show/hide
Query:  FLSHSLFRFCRLKHFEPFRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFA
        FL+HSLFR CRLKHFE  RFSSL H L QGRRDVIS +GIDACHFSSLVDVWEYECDMLNDDTKT EKDTALHSAIS+VAADFGK+SKLFLQR  SSR+A
Subjt:  FLSHSLFRFCRLKHFEPFRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFA

Query:  PVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
         VISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
Subjt:  PVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG

XP_004142657.1 DNA repair protein recA homolog 2, mitochondrial isoform X1 [Cucumis sativus]6.0e-7998.7Show/hide
Query:  MPFFLSHSLFRFCRLKHFEPFRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSS
        MPFFLSHSLFRFCRLKHFEP RFSSL HSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSS
Subjt:  MPFFLSHSLFRFCRLKHFEPFRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSS

Query:  RFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
        RFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
Subjt:  RFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG

XP_008464617.1 PREDICTED: DNA repair protein recA homolog 2, mitochondrial isoform X1 [Cucumis melo]1.4e-6790.07Show/hide
Query:  FLSHSLFRFCRLKHFEPFRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFA
        FL+HSLFR CRLKHFE  RFSSL H L QGRRDVIS +GIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAIS+VAADFGK+SKLFLQR  SSR+A
Subjt:  FLSHSLFRFCRLKHFEPFRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFA

Query:  PVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
         VISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
Subjt:  PVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG

XP_011653756.1 DNA repair protein recA homolog 2, mitochondrial isoform X2 [Cucumis sativus]1.6e-6387.01Show/hide
Query:  MPFFLSHSLFRFCRLKHFEPFRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSS
        MPFFLSHSLFRFCRLKHFEP RFSSL HSLLQGRRDVISYVGIDACHFSSL                  EKDTALHSAISQVAADFGKDSKLFLQRFLSS
Subjt:  MPFFLSHSLFRFCRLKHFEPFRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSS

Query:  RFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
        RFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
Subjt:  RFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG

XP_038883413.1 DNA repair protein recA homolog 2, mitochondrial isoform X1 [Benincasa hispida]3.7e-6081.17Show/hide
Query:  MPFFLSHSLFRFCRLKHFEPFRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSS
        M FFL+  LFR CRLKHF+  RFSSL HSL QGRRDVIS  G+DAC FSSLVDV E+ECD +NDDT+TTEKD  L SAISQ+A DFGK+S L LQRF SS
Subjt:  MPFFLSHSLFRFCRLKHFEPFRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSS

Query:  RFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
        R+APVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
Subjt:  RFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG

TrEMBL top hitse value%identityAlignment
A0A0A0L331 Uncharacterized protein2.9e-7998.7Show/hide
Query:  MPFFLSHSLFRFCRLKHFEPFRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSS
        MPFFLSHSLFRFCRLKHFEP RFSSL HSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSS
Subjt:  MPFFLSHSLFRFCRLKHFEPFRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSS

Query:  RFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
        RFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
Subjt:  RFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG

A0A1S3CNF8 DNA repair protein recA homolog 2, mitochondrial isoform X16.8e-6890.07Show/hide
Query:  FLSHSLFRFCRLKHFEPFRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFA
        FL+HSLFR CRLKHFE  RFSSL H L QGRRDVIS +GIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAIS+VAADFGK+SKLFLQR  SSR+A
Subjt:  FLSHSLFRFCRLKHFEPFRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFA

Query:  PVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
         VISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
Subjt:  PVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG

A0A5A7VKJ2 DNA repair protein recA-like protein 26.8e-6890.07Show/hide
Query:  FLSHSLFRFCRLKHFEPFRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFA
        FL+HSLFR CRLKHFE  RFSSL H L QGRRDVIS +GIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAIS+VAADFGK+SKLFLQR  SSR+A
Subjt:  FLSHSLFRFCRLKHFEPFRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFA

Query:  PVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
         VISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
Subjt:  PVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG

A0A5D3BYT7 DNA repair protein recA-like protein 23.4e-6789.4Show/hide
Query:  FLSHSLFRFCRLKHFEPFRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFA
        FL+HSLFR CRLKHFE  RFSSL H L QGRRDVIS +GIDACHFSSLVDVWEYECDMLNDDTKT EKDTALHSAIS+VAADFGK+SKLFLQR  SSR+A
Subjt:  FLSHSLFRFCRLKHFEPFRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFA

Query:  PVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
         VISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
Subjt:  PVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG

A0A6J1HRU9 DNA repair protein recA homolog 2, mitochondrial2.7e-5674.84Show/hide
Query:  MPFFLSHSLFRFCRLKHFEPFRFSSLPHSLL-QGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLS
        MPFFL+ S+FR CRLK+FE  R SSL +++  +GRRDVIS  G+DACHFSSLVDV E+ECD L+DDT+TTEKD AL  A++Q+A +FGK+S L LQRF S
Subjt:  MPFFLSHSLFRFCRLKHFEPFRFSSLPHSLL-QGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLS

Query:  SRFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
        SR APVISTGSLKLD+ALGIGGLPKGRI+E+YGQEASGKTTLALHIIKEAQKLGG
Subjt:  SRFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG

SwissProt top hitse value%identityAlignment
Q1QMW2 Protein RecA3.9e-2060Show/hide
Query:  EKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
        +K  AL +A+SQ+   FGK S + L +   S    VIS+GSL LDIALG+GGLPKGR++EIYG E+SGKTTLALH + EAQK GG
Subjt:  EKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG

Q2RQH9 Protein RecA3.9e-2058.24Show/hide
Query:  DTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGE
        D  T +K  AL +A+ Q+   FGK S + L +  S      ISTGSL LDIALGIGGLP+GRI+EIYG E+SGKTTLALH++ EAQK GG+
Subjt:  DTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGE

Q3ST50 Protein RecA3.0e-2060Show/hide
Query:  EKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
        +K  AL +A+SQ+   FGK S + L +   S    VIS+GSL LDIALG+GGLPKGRI+E+YG E+SGKTTLALH + EAQK GG
Subjt:  EKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG

Q8RY99 DNA repair protein recA homolog 2, mitochondrial2.4e-3863.43Show/hide
Query:  FRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIG
        FRF S   S L GRR V++  G +  + SSLV+  + E D + DD K  EKDTALH A+SQ++ DF KDSKL LQRF   R   VISTGSL LD+ALG+G
Subjt:  FRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIG

Query:  GLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
        GLPKGR++E+YG+EASGKTTLALHIIKEAQKLGG
Subjt:  GLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG

Q9ZUP2 DNA repair protein recA homolog 3, mitochondrial5.8e-2461.63Show/hide
Query:  TEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
        ++K+ AL  A+ Q+ + FGK S ++L R +S R  PV STGS  LD+ALG+GGLPKGR++EIYG EASGKTTLALH+I EAQK GG
Subjt:  TEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG

Arabidopsis top hitse value%identityAlignment
AT1G79050.1 recA DNA recombination family protein2.7e-1650Show/hide
Query:  DTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
        D++  ++  AL +A++ + + FGK S   L            S+G L LD+ALG GGLPKGR++EIYG E+SGKTTLALH I E QKLGG
Subjt:  DTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG

AT1G79050.2 recA DNA recombination family protein2.7e-1650Show/hide
Query:  DTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
        D++  ++  AL +A++ + + FGK S   L            S+G L LD+ALG GGLPKGR++EIYG E+SGKTTLALH I E QKLGG
Subjt:  DTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG

AT2G19490.1 recA DNA recombination family protein4.1e-2561.63Show/hide
Query:  TEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
        ++K+ AL  A+ Q+ + FGK S ++L R +S R  PV STGS  LD+ALG+GGLPKGR++EIYG EASGKTTLALH+I EAQK GG
Subjt:  TEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG

AT3G10140.1 RECA homolog 31.7e-3963.43Show/hide
Query:  FRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIG
        FRF S   S L GRR V++  G +  + SSLV+  + E D + DD K  EKDTALH A+SQ++ DF KDSKL LQRF   R   VISTGSL LD+ALG+G
Subjt:  FRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIG

Query:  GLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG
        GLPKGR++E+YG+EASGKTTLALHIIKEAQKLGG
Subjt:  GLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGG

AT3G32920.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.7e-1565.45Show/hide
Query:  LFLQRFLSSRFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHII
        ++L R +S R  PV STGS  LD+ALG+GGLPKGR++EIYG EASGKT LALH++
Subjt:  LFLQRFLSSRFAPVISTGSLKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTCTTCCTCTCACATTCACTCTTCCGCTTTTGCCGTCTCAAGCACTTCGAACCATTTCGCTTTTCCTCTCTGCCCCACTCCCTCCTCCAGGGAAGGAGAGATGT
GATCAGCTATGTGGGTATAGATGCTTGTCATTTTTCCTCACTAGTTGATGTTTGGGAGTACGAATGCGATATGCTTAATGATGATACTAAAACGACAGAGAAAGATACTG
CACTGCATTCCGCAATCTCTCAGGTTGCTGCTGATTTTGGAAAGGATTCTAAGTTGTTTTTGCAGAGGTTTCTTAGCTCCCGATTTGCACCTGTGATTTCCACTGGATCA
TTAAAGCTTGACATTGCTCTTGGGATTGGAGGATTACCTAAGGGAAGAATAATTGAAATTTATGGGCAAGAAGCTTCTGGAAAGACAACATTGGCGCTCCACATCATTAA
GGAAGCTCAGAAACTTGGAGGTGAGTACAACTTGGGGGGATTTGAACCCGAACCTCTTGTTGAGCAGTGTCAATCATCCTCCCCAAGCTCAAGTCTTGAAAAGAAATACA
ATCAGCAAGAAAGTTACTCTGCAGTTCAACTTGGGGGTAATCTTGCTAAAGACAATTAA
mRNA sequenceShow/hide mRNA sequence
AAACTGAAAACTCTTTCCAATAAGCTCTAAGAAGCATGCCATTCTTCCTCTCACATTCACTCTTCCGCTTTTGCCGTCTCAAGCACTTCGAACCATTTCGCTTTTCCTCT
CTGCCCCACTCCCTCCTCCAGGGAAGGAGAGATGTGATCAGCTATGTGGGTATAGATGCTTGTCATTTTTCCTCACTAGTTGATGTTTGGGAGTACGAATGCGATATGCT
TAATGATGATACTAAAACGACAGAGAAAGATACTGCACTGCATTCCGCAATCTCTCAGGTTGCTGCTGATTTTGGAAAGGATTCTAAGTTGTTTTTGCAGAGGTTTCTTA
GCTCCCGATTTGCACCTGTGATTTCCACTGGATCATTAAAGCTTGACATTGCTCTTGGGATTGGAGGATTACCTAAGGGAAGAATAATTGAAATTTATGGGCAAGAAGCT
TCTGGAAAGACAACATTGGCGCTCCACATCATTAAGGAAGCTCAGAAACTTGGAGGTGAGTACAACTTGGGGGGATTTGAACCCGAACCTCTTGTTGAGCAGTGTCAATC
ATCCTCCCCAAGCTCAAGTCTTGAAAAGAAATACAATCAGCAAGAAAGTTACTCTGCAGTTCAACTTGGGGGTAATCTTGCTAAAGACAATTAA
Protein sequenceShow/hide protein sequence
MPFFLSHSLFRFCRLKHFEPFRFSSLPHSLLQGRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGS
LKLDIALGIGGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGEYNLGGFEPEPLVEQCQSSSPSSSLEKKYNQQESYSAVQLGGNLAKDN