; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G17550 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G17550
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtein TAR1
Genome locationChr4:15041732..15042344
RNA-Seq ExpressionCSPI04G17550
SyntenyCSPI04G17550
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF1856643.1 hypothetical protein Lal_00043463 [Lupinus albus]5.4e-1744.59Show/hide
Query:  LPFTWNLSPLRPSKFSFEYLLLPPRSAPTAAQPELTPKVLQRLPRPPTTK-------------SDERLVFHPYTQVRRT---------------------
        +PFTWNLSPLRPSKFSFEYLLLPPRSAPT A P LTP+VLQR PRPPT +             +  +L  HP + V  T                     
Subjt:  LPFTWNLSPLRPSKFSFEYLLLPPRSAPTAAQPELTPKVLQRLPRPPTTK-------------SDERLVFHPYTQVRRT---------------------

Query:  --------------------------ICTS----ISLWANTRVSSGFAPLRHSSPSF
                                  I  S    ISL A+TRVSSGFAPLRHSSPSF
Subjt:  --------------------------ICTS----ISLWANTRVSSGFAPLRHSSPSF

KEH17029.1 senescence-associated protein [Medicago truncatula]1.9e-1478.33Show/hide
Query:  GPRRRLRNSLRCLPFTWNLSPLRPSKFSFEYLLLPPRSAPTAAQPELTPKVLQRLPRPPT
        GP  RL      LPFTWNLSPLRPSKFSFEYLLLPPRSAPT A P LTP+VLQR PRPPT
Subjt:  GPRRRLRNSLRCLPFTWNLSPLRPSKFSFEYLLLPPRSAPTAAQPELTPKVLQRLPRPPT

PHT26146.1 Protein TAR1 [Capsicum baccatum]2.5e-1486Show/hide
Query:  LPFTWNLSPLRPSKFSFEYLLLPPRSAPTAAQPELTPKVLQRLPRPPTTK
        +PFTWNLSPLRPSKFSFEYLLLPPRSAPTAA P L PKVLQR PRPPT +
Subjt:  LPFTWNLSPLRPSKFSFEYLLLPPRSAPTAAQPELTPKVLQRLPRPPTTK

PHT27344.1 hypothetical protein CQW23_33044 [Capsicum baccatum]1.9e-1489.58Show/hide
Query:  LPFTWNLSPLRPSKFSFEYLLLPPRSAPTAAQPELTPKVLQRLPRPPT
        +PFTWNLSPLRPSKFSFEYLLLPPRSAPTAA P L PKVLQR PRPPT
Subjt:  LPFTWNLSPLRPSKFSFEYLLLPPRSAPTAAQPELTPKVLQRLPRPPT

RXI09567.1 hypothetical protein DVH24_033635 [Malus domestica]2.3e-1558.51Show/hide
Query:  PLRPSKFSFEYLLLPPRSAPTAAQPELTPKVLQRLPR---------PPTTKSDERLVFHPYTQVRRTICTSISLWANTRVSSGFAPLRHSSPSF
        PLRPSKFSFEYLLLPPRSAPTAA P L P+VL+R PR         P        L  HP++ +   + +++SL A+TRVSSGFAPLRHSSPSF
Subjt:  PLRPSKFSFEYLLLPPRSAPTAAQPELTPKVLQRLPR---------PPTTKSDERLVFHPYTQVRRTICTSISLWANTRVSSGFAPLRHSSPSF

TrEMBL top hitse value%identityAlignment
A0A6A5LAM0 Uncharacterized protein2.6e-1744.59Show/hide
Query:  LPFTWNLSPLRPSKFSFEYLLLPPRSAPTAAQPELTPKVLQRLPRPPTTK-------------SDERLVFHPYTQVRRT---------------------
        +PFTWNLSPLRPSKFSFEYLLLPPRSAPT A P LTP+VLQR PRPPT +             +  +L  HP + V  T                     
Subjt:  LPFTWNLSPLRPSKFSFEYLLLPPRSAPTAAQPELTPKVLQRLPRPPTTK-------------SDERLVFHPYTQVRRT---------------------

Query:  --------------------------ICTS----ISLWANTRVSSGFAPLRHSSPSF
                                  I  S    ISL A+TRVSSGFAPLRHSSPSF
Subjt:  --------------------------ICTS----ISLWANTRVSSGFAPLRHSSPSF

A0A6N2KRY6 Uncharacterized protein1.2e-1749.29Show/hide
Query:  GAPDTTGRAVLFQPLDPTSGRAVFRVGRLLNRKDNSSRGP-------------RRRLRNSLRCLPFT--------------------------WNLSPLR
        GAPDTT RAVLFQPLDPT  ++ F  GR + +KDNSS  P               R RN    +PF                            NLSPLR
Subjt:  GAPDTTGRAVLFQPLDPTSGRAVFRVGRLLNRKDNSSRGP-------------RRRLRNSLRCLPFT--------------------------WNLSPLR

Query:  PSKFSFEYLLLPPRSAPTAAQPELTPKVLQRLPRPPTTKS
        PSKFSFEYLLLPPRSAPTAA P L P VLQR PRPPT ++
Subjt:  PSKFSFEYLLLPPRSAPTAAQPELTPKVLQRLPRPPTTKS

A0A6N2KU67 Uncharacterized protein1.3e-1959.02Show/hide
Query:  GTRSSRFSRAVGGAPDTTGRAVLFQPLDPTSGRAVFRVGR----LLNRKDNSSRGPRRRLRNSLRCLPFT--------WNLSPLRPSKFSFEYLLLPPRS
        GTRSS FSRA GGAPDTT RAVLFQPLDPTS ++ F+  R    +L R    +R   R      R L  T            PLRPSKFSFEYLLLPPRS
Subjt:  GTRSSRFSRAVGGAPDTTGRAVLFQPLDPTSGRAVFRVGR----LLNRKDNSSRGPRRRLRNSLRCLPFT--------WNLSPLRPSKFSFEYLLLPPRS

Query:  APTAAQPELTPKVLQRLPRPPT
        APTAA P L P VLQR PRPPT
Subjt:  APTAAQPELTPKVLQRLPRPPT

A0A6N2MN73 Uncharacterized protein4.0e-1860Show/hide
Query:  GTRSSRFSRAVGGAPDTTGRAVLFQPLDPTSGRAVFRVGRLLNRKDNSSRGPRRRLRNSLRCLPFTWNLSPLRPSKFSFEYLLLPPRSAPTAAQPELTPK
        GTRSS FSRA GGAPDTT R  +  P  P     +  V          SR    RL +    +PFTWNLSPLRPSKFSFEYLLLPPRSAPTAA P L P 
Subjt:  GTRSSRFSRAVGGAPDTTGRAVLFQPLDPTSGRAVFRVGRLLNRKDNSSRGPRRRLRNSLRCLPFTWNLSPLRPSKFSFEYLLLPPRSAPTAAQPELTPK

Query:  VLQRLPRPPT
        VLQR PRPPT
Subjt:  VLQRLPRPPT

A0A6N2NEU6 Uncharacterized protein1.8e-1852Show/hide
Query:  LPFTWNLSPLRPSKFSFEYLLLPPRSAPTAAQPELTPKVLQRLPRPPTTK---------------SDERLVFHPYTQVRRT-----------------IC
        +PFTWNLSPLRPSKFSFEYLLLPPRSAPTAA P L P VLQR PRPPT +               +  RL  HP + V  T                   
Subjt:  LPFTWNLSPLRPSKFSFEYLLLPPRSAPTAAQPELTPKVLQRLPRPPTTK---------------SDERLVFHPYTQVRRT-----------------IC

Query:  TSISLWANTRVSSGFAPLRHSSPSF
            L    RVSSGFAPLRHSSPSF
Subjt:  TSISLWANTRVSSGFAPLRHSSPSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGCACTCGGTCCTCCAGATTTTCAAGGGCCGTCGGGGGCGCACCGGACACCACGGGACGTGCGGTGCTCTTCCAGCCACTGGACCCTACCTCCGGTCGAGCCGT
TTTCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCCCGACGACGTCTCCGGAATTCCTTACGTTGCCTGCCGTTCACATGGAACCTTTCCCCTC
TTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCAGCCCGAGCTCACGCCCAAGGTTTTGCAGCGACTGCCTCGCCCT
CCTACCACCAAGTCAGACGAACGATTAGTCTTTCACCCCTATACCCAAGTCAGACGAACAATTTGCACGTCAATATCGCTATGGGCCAACACCAGAGTTTCCTCTGGCTT
CGCCCCGCTGAGGCATAGTTCACCATCTTTCTTTTGTCCTAAAACTCGTAGTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGCACTCGGTCCTCCAGATTTTCAAGGGCCGTCGGGGGCGCACCGGACACCACGGGACGTGCGGTGCTCTTCCAGCCACTGGACCCTACCTCCGGTCGAGCCGT
TTTCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCCCGACGACGTCTCCGGAATTCCTTACGTTGCCTGCCGTTCACATGGAACCTTTCCCCTC
TTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCAGCCCGAGCTCACGCCCAAGGTTTTGCAGCGACTGCCTCGCCCT
CCTACCACCAAGTCAGACGAACGATTAGTCTTTCACCCCTATACCCAAGTCAGACGAACAATTTGCACGTCAATATCGCTATGGGCCAACACCAGAGTTTCCTCTGGCTT
CGCCCCGCTGAGGCATAGTTCACCATCTTTCTTTTGTCCTAAAACTCGTAGTTTGTAA
Protein sequenceShow/hide protein sequence
MRGTRSSRFSRAVGGAPDTTGRAVLFQPLDPTSGRAVFRVGRLLNRKDNSSRGPRRRLRNSLRCLPFTWNLSPLRPSKFSFEYLLLPPRSAPTAAQPELTPKVLQRLPRP
PTTKSDERLVFHPYTQVRRTICTSISLWANTRVSSGFAPLRHSSPSFFCPKTRSL