CuGenDBv2

Gene ID	CSPI04G17560
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	DNA topoisomerase 2-binding protein 1 isoform X2
Genome location	Chr4:15046938..15050091
RNA-Seq Expression	CSPI04G17560
Synteny	CSPI04G17560
Gene Ontology terms	GO:0016853 - isomerase activity (molecular function)
InterPro domains	IPR001357 - BRCT domain IPR036420 - BRCT domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0052213.1 DNA topoisomerase 2-binding protein 1 isoform X2 [Cucumis melo var. makuwa]

7.3e-192

91.3

Show/hide

Query:  MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM
        MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPS+N PNDYHVISSA H KFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM
Subjt:  MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM

Query:  DGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAG
        DGVKILASGFQEDEK EIGKLVSAMGGVL+TKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVS IPAG
Subjt:  DGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAG

Query:  -ECKEMAKLILQNGGRYSADLTRK-----SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQEKVNGNLEA
         E KEM KLILQNGGRYSADLTRK     SPEGDKYKVAR WGRINIVTRKWFDQS+ARK CL+EELYPVG VSGTSNKLTR CLTAHNSQEKV GNL+A
Subjt:  -ECKEMAKLILQNGGRYSADLTRK-----SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQEKVNGNLEA

Query:  VPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVPVTMGRNEENTVNCLANDF
         PSSF ADS FT V+GPGFSDMDVE TLSQSTSMFSDAS+FINEVDVEVPV  GRNEENTVNCLANDF
Subjt:  VPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVPVTMGRNEENTVNCLANDF

XP_016899869.1 PREDICTED: DNA topoisomerase 2-binding protein 1 isoform X1 [Cucumis melo]

1.1e-192

90.79

Show/hide

Query:  MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM
        MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPS+N PNDYHVISSA H KFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM
Subjt:  MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM

Query:  DGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAG
        DGVKILASGFQEDEK EIGKLVSAMGGVL+TKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVS IPAG
Subjt:  DGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAG

Query:  ECKEMAKLILQNGGRYSADLTRK-------SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQEKVNGNLE
        E KEM KLILQNGGRYSADLTRK       +PEGDKYKVAR WGRINIVTRKWFDQS+ARK CL+EELYPVG VSGTSNKLTR CLTAHNSQEKV GNL+
Subjt:  ECKEMAKLILQNGGRYSADLTRK-------SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQEKVNGNLE

Query:  AVPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVPVTMGRNEENTVNCLANDF
        A PSSF ADS FT V+GPGFSDMDVE TLSQSTSMFSDAS+FINEVDVEVPV  GRNEENTVNCLANDF
Subjt:  AVPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVPVTMGRNEENTVNCLANDF

XP_016899871.1 PREDICTED: DNA topoisomerase 2-binding protein 1 isoform X2 [Cucumis melo]

1.1e-192

90.79

Show/hide

Query:  MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM
        MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPS+N PNDYHVISSA H KFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM
Subjt:  MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM

Query:  DGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAG
        DGVKILASGFQEDEK EIGKLVSAMGGVL+TKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVS IPAG
Subjt:  DGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAG

Query:  ECKEMAKLILQNGGRYSADLTRK-------SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQEKVNGNLE
        E KEM KLILQNGGRYSADLTRK       +PEGDKYKVAR WGRINIVTRKWFDQS+ARK CL+EELYPVG VSGTSNKLTR CLTAHNSQEKV GNL+
Subjt:  ECKEMAKLILQNGGRYSADLTRK-------SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQEKVNGNLE

Query:  AVPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVPVTMGRNEENTVNCLANDF
        A PSSF ADS FT V+GPGFSDMDVE TLSQSTSMFSDAS+FINEVDVEVPV  GRNEENTVNCLANDF
Subjt:  AVPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVPVTMGRNEENTVNCLANDF

XP_031740436.1 LOW QUALITY PROTEIN: DNA topoisomerase 2-binding protein 1 [Cucumis sativus]

1.4e-203

95.93

Show/hide

Query:  MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM
        MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSA HAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM
Subjt:  MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM

Query:  DGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAG
        DGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQE YRVLPFSGLNISVSGIPAG
Subjt:  DGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAG

Query:  ECKEMAKLILQNGGRYSADLTRK-------SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQEKVNGNLE
        E KEM KLILQNGGRYSADLTRK       +PEGDKYKVARKWGRINIVTRKWFDQS+ARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQEKVNGNLE
Subjt:  ECKEMAKLILQNGGRYSADLTRK-------SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQEKVNGNLE

Query:  AVPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVPVTMGRNEENTVNCLANDF
        AVPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDAS+FINEVD+EVPVTMGRNEENTVNCLANDF
Subjt:  AVPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVPVTMGRNEENTVNCLANDF

XP_038898756.1 DNA topoisomerase 2-binding protein 1 isoform X2 [Benincasa hispida]

6.1e-191

88.89

Show/hide

Query:  MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM
        MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPS+N PNDYHVISS  H KFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQG+TCCLAM
Subjt:  MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM

Query:  DGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAG
        DGVKILASGFQEDEKVEIGKLV+AMGGVLH KASLDVSFVIAKNALAAKYKWALNISKKPIV+F+WLQQCWIEHRVVPQEGYRVLPFSGLNISVS IPAG
Subjt:  DGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAG

Query:  ECKEMAKLILQNGGRYSADLTRK-------SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQEKVNGNLE
        E KE+ KLILQNGGRYSADLTRK       +PEGDKYKVAR WGRINIVTRKWFDQS+ARK CLNEELYPVGSVSGTSNK+TRGCLTAHNSQEK+ GNL+
Subjt:  ECKEMAKLILQNGGRYSADLTRK-------SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQEKVNGNLE

Query:  AVPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVPVTMGRNEENTVNCLANDF
        AVPSSF+ADS F+ V+GPGFSDMD E TLSQSTSMFSDAS+FINEVDVEVPV MG+NEENT NC+ANDF
Subjt:  AVPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVPVTMGRNEENTVNCLANDF

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DV57 DNA topoisomerase 2-binding protein 1 isoform X1

5.4e-193

90.79

Show/hide

Query:  MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM
        MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPS+N PNDYHVISSA H KFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM
Subjt:  MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM

Query:  DGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAG
        DGVKILASGFQEDEK EIGKLVSAMGGVL+TKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVS IPAG
Subjt:  DGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAG

Query:  ECKEMAKLILQNGGRYSADLTRK-------SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQEKVNGNLE
        E KEM KLILQNGGRYSADLTRK       +PEGDKYKVAR WGRINIVTRKWFDQS+ARK CL+EELYPVG VSGTSNKLTR CLTAHNSQEKV GNL+
Subjt:  ECKEMAKLILQNGGRYSADLTRK-------SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQEKVNGNLE

Query:  AVPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVPVTMGRNEENTVNCLANDF
        A PSSF ADS FT V+GPGFSDMDVE TLSQSTSMFSDAS+FINEVDVEVPV  GRNEENTVNCLANDF
Subjt:  AVPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVPVTMGRNEENTVNCLANDF

A0A1S4DV59 DNA topoisomerase 2-binding protein 1 isoform X2

5.4e-193

90.79

Show/hide

Query:  MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM
        MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPS+N PNDYHVISSA H KFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM
Subjt:  MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM

Query:  DGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAG
        DGVKILASGFQEDEK EIGKLVSAMGGVL+TKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVS IPAG
Subjt:  DGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAG

Query:  ECKEMAKLILQNGGRYSADLTRK-------SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQEKVNGNLE
        E KEM KLILQNGGRYSADLTRK       +PEGDKYKVAR WGRINIVTRKWFDQS+ARK CL+EELYPVG VSGTSNKLTR CLTAHNSQEKV GNL+
Subjt:  ECKEMAKLILQNGGRYSADLTRK-------SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQEKVNGNLE

Query:  AVPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVPVTMGRNEENTVNCLANDF
        A PSSF ADS FT V+GPGFSDMDVE TLSQSTSMFSDAS+FINEVDVEVPV  GRNEENTVNCLANDF
Subjt:  AVPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVPVTMGRNEENTVNCLANDF

A0A5A7U8G5 DNA topoisomerase 2-binding protein 1 isoform X2

3.5e-192

91.3

Show/hide

Query:  MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM
        MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPS+N PNDYHVISSA H KFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM
Subjt:  MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM

Query:  DGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAG
        DGVKILASGFQEDEK EIGKLVSAMGGVL+TKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVS IPAG
Subjt:  DGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAG

Query:  -ECKEMAKLILQNGGRYSADLTRK-----SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQEKVNGNLEA
         E KEM KLILQNGGRYSADLTRK     SPEGDKYKVAR WGRINIVTRKWFDQS+ARK CL+EELYPVG VSGTSNKLTR CLTAHNSQEKV GNL+A
Subjt:  -ECKEMAKLILQNGGRYSADLTRK-----SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQEKVNGNLEA

Query:  VPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVPVTMGRNEENTVNCLANDF
         PSSF ADS FT V+GPGFSDMDVE TLSQSTSMFSDAS+FINEVDVEVPV  GRNEENTVNCLANDF
Subjt:  VPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVPVTMGRNEENTVNCLANDF

A0A5D3BRP8 DNA topoisomerase 2-binding protein 1 isoform X2

1.2e-189

86.15

Show/hide

Query:  MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLL-----------------------GPQ
        MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPS+N PNDYHVISSA H KFEDLRAKGCNLL                       GPQ
Subjt:  MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLL-----------------------GPQ

Query:  CVMSCAKEHRPLPQQGYTCCLAMDGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVV
        CVMSCAKEHRPLPQQGYTCCLAMDGVKILASGFQEDEK EIGKLVSAMGGVL+TKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVV
Subjt:  CVMSCAKEHRPLPQQGYTCCLAMDGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVV

Query:  PQEGYRVLPFSGLNISVSGIPAGECKEMAKLILQNGGRYSADLTRK-----SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSN
        PQEGYRVLPFSGLNISVS IPAGE KEM KLILQNGGRYSADLTRK     SPEGDKYKVAR WGRINIVTRKWFDQS+ARK CL+EELYPVG VSGTSN
Subjt:  PQEGYRVLPFSGLNISVSGIPAGECKEMAKLILQNGGRYSADLTRK-----SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSN

Query:  KLTRGCLTAHNSQEKVNGNLEAVPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVPVTMGRNEENTVNCLANDF
        KLTR CLTAHNSQEKV GNL+A PSSF ADS FT V+GPGFSDMDVE TLSQSTSMFSDAS+FINEVDVEVPV  GRNEENTVNCLANDF
Subjt:  KLTRGCLTAHNSQEKVNGNLEAVPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVPVTMGRNEENTVNCLANDF

A0A6J1FES7 DNA topoisomerase 2-binding protein 1-A isoform X2

5.1e-183

84.82

Show/hide

Query:  MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM
        MLKPKPFAGANVFVSRNLVAPE+FDALHDALKQNGAEVFLCCDP++N P DYHVISSA H KFEDLRAKGCNLLGPQCVMSCAKE+RPLPQQG+TCCLAM
Subjt:  MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAM

Query:  DGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAG
        DGVKILASGFQ DEKVEIGKLV+AMGGVL T+AS DVSFVIAKNALAAKYKWALNISKKPIV+ +WLQQCWIEHRVVPQ+GYRVLPFSGLNISVS IPA 
Subjt:  DGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAG

Query:  ECKEMAKLILQNGGRYSADLTRK-------SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQEKVNGNLE
        E KE+ KLILQNGGRYSADLTRK       +PEGDKYKVAR WG INIVTRKWFDQS+ R+ CLNEELYPVGSVS TSNK+ RGCLT+HNSQEKVNGN++
Subjt:  ECKEMAKLILQNGGRYSADLTRK-------SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQEKVNGNLE

Query:  AVPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVPVTMGRNEENTVNCLANDF
        A PSSF+ADS F+ V+GPGFSDMD+E TLSQSTSMFSDAS+FINEVDVEVPVTM +NEENT NC+ANDF
Subjt:  AVPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVPVTMGRNEENTVNCLANDF

SwissProt top hits

e value

%identity

Alignment

Q7ZZY3 DNA topoisomerase 2-binding protein 1-B

4.1e-20

27.39

Show/hide

Query:  AKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCC-LAMDGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKK
        A F  L+  GC ++GPQ V+ C +  R +P+  Y    +AM  V I  +   ++ + ++   V  MGG ++   ++ V+ +IA    + KY  A ++ +K
Subjt:  AKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCC-LAMDGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKK

Query:  PIVSFSWLQQCW-------IEHRVVPQEGYRVLPFSGLNISVSGIPAGECKEMAKLILQNGGRY--------SADLTRKSPEGDKYKVARKWGRINIVTR
        PI+  SW+++ W       I +  V    Y    F G  I V+G+ + + KE+ +L   +GG Y        S  L  +  +G KY+ ARKW  ++ ++ 
Subjt:  PIVSFSWLQQCW-------IEHRVVPQEGYRVLPFSGLNISVSGIPAGECKEMAKLILQNGGRY--------SADLTRKSPEGDKYKVARKWGRINIVTR

Query:  KWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQ
        +WF  S+ +  C +E +Y +   S   +       T  NS+
Subjt:  KWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQ

Q800K6 DNA topoisomerase 2-binding protein 1-A

3.7e-21

25.52

Show/hide

Query:  EMFDALHDALKQNGAEVFLCCDPSQNA------PNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCC-LAMDGVKILASGFQEDE
        E F   ++A+KQ  ++  L     + A          ++      A F  L+  GC ++GPQ V+ C +  R +P+  Y    +AM  V I  +   ++ 
Subjt:  EMFDALHDALKQNGAEVFLCCDPSQNA------PNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCC-LAMDGVKILASGFQEDE

Query:  KVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCW-------IEHRVVPQEGYRVLPFSGLNISVSGIPAGECKEMAK
        + ++   V  MGG ++   ++ V+ +IA    + KY  A ++ +KPI+  SW+++ W       I +  V    Y    F G  I V+G+ + + KE+ +
Subjt:  KVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCW-------IEHRVVPQEGYRVLPFSGLNISVSGIPAGECKEMAK

Query:  LILQNGGRY--------SADLTRKSPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQ
        L   +GG Y        S  L  +  +G KY+ ARKW  ++ ++ +WF  S+ +  C +E +Y +   S   +       T  NS+
Subjt:  LILQNGGRY--------SADLTRKSPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQ

Q92547 DNA topoisomerase 2-binding protein 1

4.3e-22

26.51

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Query:  LKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCC-LAMDGVKILASGFQEDEKVEIGKLVSAMGGVL
        +K+N   +++ CDP                  F+ L+  GC ++GPQ V+ C    R +P+  +    + M  V I  +  +++++ E+ K V  MGG +
Subjt:  LKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCC-LAMDGVKILASGFQEDEKVEIGKLVSAMGGVL

Query:  HTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCW--------IEHRVVPQEGYRVLPFSGLNISVSGIPAGECKEMAKLILQNGGRYSADLT
        +   ++ V+ +IA    + KY  A N+ KKPI+  SW++  W          +  +  E ++   F G  I V+G+   + KE+ +L +++GG+Y   L 
Subjt:  HTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCW--------IEHRVVPQEGYRVLPFSGLNISVSGIPAGECKEMAKLILQNGGRYSADLT

Query:  R--------KSPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELY
                 + P+G KY+ A++W  ++ VT +WF  S+ +  C +E +Y
Subjt:  R--------KSPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELY

Arabidopsis top hits

e value

%identity

Alignment

AT1G77320.1 transcription coactivators

9.1e-108

56.52

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Query:  FAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAMDGVKIL
        F GANVF+SRNLV PE+FD L DA K NGAE+FLCCDPS++ P+D+HVI+S  H KF+DL+AKGCNL+GPQC + CAKE RPLPQ+G+TCCLAMDG+K+L
Subjt:  FAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAMDGVKIL

Query:  ASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAGECKEMA
        ASGF  DEKV+I +LV++MGGVL ++AS DV+FVI KN LAAKYKWALN  KKPIV+ +WL +CW EHRVVPQE Y++ PFSGL I V+ IPA E K M 
Subjt:  ASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAGECKEMA

Query:  KLILQNGGRYSADLTRK-------SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPV-GSVSGTSNKLTRGC--LTAHNSQEKVNGNLEAVP
        K+I + GG YSA+LT+        + EGDKYKVARKWG I IVTRKWF QS+ +K CLNEE YPV GS+      LTRG   L  HN        LE  P
Subjt:  KLILQNGGRYSADLTRK-------SPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPV-GSVSGTSNKLTRGC--LTAHNSQEKVNGNLEAVP

Query:  SSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVP---VTMGRNEENTVNCLAND
        S+  A +  + V+     D D+E + SQ  ++F  + N     DV+ P    T    E+N   C A D
Subjt:  SSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVP---VTMGRNEENTVNCLAND

AT1G77320.2 transcription coactivators

2.0e-102

55.96

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Query:  FAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAMDGVKIL
        F GANVF+SRNLV PE+FD L DA K NGAE+FLCCDPS++ P+D+       H KF+DL+AKGCNL+GPQC + CAKE RPLPQ+G+TCCLAMDG+K+L
Subjt:  FAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAMDGVKIL

Query:  ASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAGECKEMA
        ASGF  DEKV+I +LV++MGGVL ++AS DV+FVI KN LAAKYKWALN  KKPIV+ +WL +CW EHRVVPQE Y++ PFSGL I V+ IPA E K M 
Subjt:  ASGFQEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAGECKEMA

Query:  KLILQNGGRYSADLTRKSPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPV-GSVSGTSNKLTRGC--LTAHNSQEKVNGNLEAVPSSFLADS
        K+I + GG YSA+LT+     DKYKVARKWG I IVTRKWF QS+ +K CLNEE YPV GS+      LTRG   L  HN        LE  PS+  A +
Subjt:  KLILQNGGRYSADLTRKSPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPV-GSVSGTSNKLTRGC--LTAHNSQEKVNGNLEAVPSSFLADS

Query:  KFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVP---VTMGRNEENTVNCLAND
          + V+     D D+E + SQ  ++F  + N     DV+ P    T    E+N   C A D
Subjt:  KFTVVAGPGFSDMDVEVTLSQSTSMFSDASNFINEVDVEVP---VTMGRNEENTVNCLAND

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTGAAGCCCAAGCCATTCGCCGGAGCTAATGTGTTCGTCTCTCGTAATCTTGTCGCTCCGGAGATGTTCGATGCTCTTCACGACGCTCTCAAGCAGAATGGGGCTGA
GGTTTTCCTCTGTTGCGATCCCTCTCAAAACGCCCCTAACGACTATCATGTTATCTCCTCCGCCCATCACGCAAAGTTCGAGGATCTTCGCGCCAAGGGATGCAACTTGT
TAGGTCCTCAGTGCGTGATGTCATGTGCAAAAGAGCACAGACCCCTTCCTCAACAGGGTTATACTTGCTGCCTTGCCATGGATGGTGTGAAAATCTTGGCATCCGGTTTT
CAGGAAGATGAAAAGGTTGAGATAGGGAAGTTAGTTAGTGCAATGGGGGGAGTATTGCATACGAAAGCATCACTAGATGTCAGTTTTGTTATCGCGAAGAATGCTTTGGC
TGCGAAATACAAGTGGGCACTAAACATTTCAAAGAAACCAATCGTGTCATTTTCTTGGTTACAACAATGCTGGATTGAACATCGTGTTGTGCCTCAGGAGGGATATCGGG
TCCTTCCATTTTCTGGACTGAATATTTCGGTATCTGGAATTCCTGCAGGTGAGTGCAAGGAGATGGCAAAGCTTATCTTGCAAAATGGTGGAAGATATTCTGCCGATCTC
ACAAGAAAGTCTCCTGAAGGTGACAAGTACAAGGTTGCACGAAAGTGGGGCCGTATCAATATTGTTACTCGGAAATGGTTTGATCAGTCCATGGCCAGAAAAGGATGTCT
TAATGAGGAGTTGTACCCTGTTGGTAGCGTTTCTGGAACTTCAAATAAATTGACAAGGGGTTGCTTGACTGCTCACAATAGCCAAGAAAAGGTTAATGGGAACTTGGAAG
CTGTACCATCCTCATTTCTCGCCGATTCAAAATTCACAGTAGTTGCTGGTCCTGGGTTTTCAGACATGGATGTTGAAGTTACTCTTTCACAGAGCACGTCTATGTTTTCA
GATGCTTCTAATTTTATAAATGAGGTTGATGTTGAAGTGCCAGTCACGATGGGAAGGAATGAAGAAAACACTGTTAATTGTCTTGCAAATGACTTTTAG

mRNA sequence

Show/hide mRNA sequence

CGCCGGACTTCCATCGACACAGAAAGTAATCGAAGCAACTTCCCTAATGCTGAAGCCCAAGCCATTCGCCGGAGCTAATGTGTTCGTCTCTCGTAATCTTGTCGCTCCGG
AGATGTTCGATGCTCTTCACGACGCTCTCAAGCAGAATGGGGCTGAGGTTTTCCTCTGTTGCGATCCCTCTCAAAACGCCCCTAACGACTATCATGTTATCTCCTCCGCC
CATCACGCAAAGTTCGAGGATCTTCGCGCCAAGGGATGCAACTTGTTAGGTCCTCAGTGCGTGATGTCATGTGCAAAAGAGCACAGACCCCTTCCTCAACAGGGTTATAC
TTGCTGCCTTGCCATGGATGGTGTGAAAATCTTGGCATCCGGTTTTCAGGAAGATGAAAAGGTTGAGATAGGGAAGTTAGTTAGTGCAATGGGGGGAGTATTGCATACGA
AAGCATCACTAGATGTCAGTTTTGTTATCGCGAAGAATGCTTTGGCTGCGAAATACAAGTGGGCACTAAACATTTCAAAGAAACCAATCGTGTCATTTTCTTGGTTACAA
CAATGCTGGATTGAACATCGTGTTGTGCCTCAGGAGGGATATCGGGTCCTTCCATTTTCTGGACTGAATATTTCGGTATCTGGAATTCCTGCAGGTGAGTGCAAGGAGAT
GGCAAAGCTTATCTTGCAAAATGGTGGAAGATATTCTGCCGATCTCACAAGAAAGTCTCCTGAAGGTGACAAGTACAAGGTTGCACGAAAGTGGGGCCGTATCAATATTG
TTACTCGGAAATGGTTTGATCAGTCCATGGCCAGAAAAGGATGTCTTAATGAGGAGTTGTACCCTGTTGGTAGCGTTTCTGGAACTTCAAATAAATTGACAAGGGGTTGC
TTGACTGCTCACAATAGCCAAGAAAAGGTTAATGGGAACTTGGAAGCTGTACCATCCTCATTTCTCGCCGATTCAAAATTCACAGTAGTTGCTGGTCCTGGGTTTTCAGA
CATGGATGTTGAAGTTACTCTTTCACAGAGCACGTCTATGTTTTCAGATGCTTCTAATTTTATAAATGAGGTTGATGTTGAAGTGCCAGTCACGATGGGAAGGAATGAAG
AAAACACTGTTAATTGTCTTGCAAATGACTTTTAG

Protein sequence

Show/hide protein sequence

MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSQNAPNDYHVISSAHHAKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAMDGVKILASGF
QEDEKVEIGKLVSAMGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGIPAGECKEMAKLILQNGGRYSADL
TRKSPEGDKYKVARKWGRINIVTRKWFDQSMARKGCLNEELYPVGSVSGTSNKLTRGCLTAHNSQEKVNGNLEAVPSSFLADSKFTVVAGPGFSDMDVEVTLSQSTSMFS
DASNFINEVDVEVPVTMGRNEENTVNCLANDF

CSPI04G17560 (gene) of Cucumber (PI 183967) v1 genome