; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G17640 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G17640
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionExtensin-like protein
Genome locationChr4:15117262..15118094
RNA-Seq ExpressionCSPI04G17640
SyntenyCSPI04G17640
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649619.1 hypothetical protein Csa_012837 [Cucumis sativus]1.9e-8399.36Show/hide
Query:  MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAVSHFPHPPNSLHSSPRTQSERWRFVRSEQVSSSGCFPSPLPNRKSPKSV
        MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQH+RQKLKPPPAVSHFPHPPNSLHSSPRTQSERWRFVRSEQVSSSGCFPSPLPNRKSPKSV
Subjt:  MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAVSHFPHPPNSLHSSPRTQSERWRFVRSEQVSSSGCFPSPLPNRKSPKSV

Query:  SRKLPEPDYSSDLDTLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWA
        SRKLPEPDYSSDLDTLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWA
Subjt:  SRKLPEPDYSSDLDTLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWA

XP_004142634.1 uncharacterized protein LOC101220757 [Cucumis sativus]8.3e-8799.38Show/hide
Query:  MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAVSHFPHPPNSLHSSPRTQSERWRFVRSEQVSSSGCFPSPLPNRKSPKSV
        MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQH+RQKLKPPPAVSHFPHPPNSLHSSPRTQSERWRFVRSEQVSSSGCFPSPLPNRKSPKSV
Subjt:  MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAVSHFPHPPNSLHSSPRTQSERWRFVRSEQVSSSGCFPSPLPNRKSPKSV

Query:  SRKLPEPDYSSDLDTLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
        SRKLPEPDYSSDLDTLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
Subjt:  SRKLPEPDYSSDLDTLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF

XP_008444194.1 PREDICTED: uncharacterized protein LOC103487607 [Cucumis melo]2.6e-8093.25Show/hide
Query:  MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAVSHFPHPPNSLHSSPRTQSERWRFVRSEQVSSSGCFPSPLPNRKSPKSV
        MDTDEFYR+PAAVPFKWEIKPGVPRNHHR R SPTHSPPQH+RQKLKPPPAVSHFPHP NSLHSSPRT+S+RWRFVRSEQVSSSGCFPSPLPNRKSPK++
Subjt:  MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAVSHFPHPPNSLHSSPRTQSERWRFVRSEQVSSSGCFPSPLPNRKSPKSV

Query:  SRKLPEPDYSSDLDTLSRWSVSSRKSISPFRYSV-SSSPSSFSSYQSSPRPTSDTEWAGFGLF
        SRK PEPDYSSDLDTLSRWSVSSRKSISPFRYSV SSSPSSFSSYQSSPRPTSDTEWAGFGLF
Subjt:  SRKLPEPDYSSDLDTLSRWSVSSRKSISPFRYSV-SSSPSSFSSYQSSPRPTSDTEWAGFGLF

XP_022131529.1 uncharacterized protein DKFZp434B061-like [Momordica charantia]1.3e-5574.42Show/hide
Query:  MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAVSHFPHPPN----SLHSSPRTQSERWRFVRSE-----QVS-SSGCFPSP
        MD DEFYR+PAAVPFKWEIKPGVPR HHRL  SP  SPP    QKLKPPP VSHF  P      SLHSS RT+S+RWRF RS      QVS ++GCFPSP
Subjt:  MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAVSHFPHPPN----SLHSSPRTQSERWRFVRSE-----QVS-SSGCFPSP

Query:  LPNRKSPKSVSRKLPEPDYSSDLDTLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
         PNRKS KS++RK PEP+Y+++L+TLSRWSVSSRKSISPFR SVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
Subjt:  LPNRKSPKSVSRKLPEPDYSSDLDTLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF

XP_038899347.1 uncharacterized protein LOC120086669 [Benincasa hispida]6.0e-6985.19Show/hide
Query:  MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAVSHFPHPPNSLHSSPRTQSERWRFVRSEQVSSSGCFPSPLPNRKSPKSV
        MD DEFYRQPAAVPFKWEIKPGVP+NHHRLRHSPTHSPPQH+ QKLKPPP+VS+F HP NSLHSS RT+S+RWRF + EQV SSGCFPSPLPNRKS KS+
Subjt:  MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAVSHFPHPPNSLHSSPRTQSERWRFVRSEQVSSSGCFPSPLPNRKSPKSV

Query:  SRKLPEPDYSSDLDTLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
        SR  PEPDYSS L++LSRWSVSSRKSISPFRYSVSSSPSS+SSY SSPRPTSDTEWAGFGLF
Subjt:  SRKLPEPDYSSDLDTLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF

TrEMBL top hitse value%identityAlignment
A0A0A0KY52 Uncharacterized protein5.8e-6299.15Show/hide
Query:  MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAVSHFPHPPNSLHSSPRTQSERWRFVRSEQVSSSGCFPSPLPNRKSPKSV
        MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQH+RQKLKPPPAVSHFPHPPNSLHSSPRTQSERWRFVRSEQVSSSGCFPSPLPNRKSPKSV
Subjt:  MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAVSHFPHPPNSLHSSPRTQSERWRFVRSEQVSSSGCFPSPLPNRKSPKSV

Query:  SRKLPEPDYSSDLDTLSR
        SRKLPEPDYSSDLDTLSR
Subjt:  SRKLPEPDYSSDLDTLSR

A0A1S3BAM4 uncharacterized protein LOC1034876071.2e-8093.25Show/hide
Query:  MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAVSHFPHPPNSLHSSPRTQSERWRFVRSEQVSSSGCFPSPLPNRKSPKSV
        MDTDEFYR+PAAVPFKWEIKPGVPRNHHR R SPTHSPPQH+RQKLKPPPAVSHFPHP NSLHSSPRT+S+RWRFVRSEQVSSSGCFPSPLPNRKSPK++
Subjt:  MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAVSHFPHPPNSLHSSPRTQSERWRFVRSEQVSSSGCFPSPLPNRKSPKSV

Query:  SRKLPEPDYSSDLDTLSRWSVSSRKSISPFRYSV-SSSPSSFSSYQSSPRPTSDTEWAGFGLF
        SRK PEPDYSSDLDTLSRWSVSSRKSISPFRYSV SSSPSSFSSYQSSPRPTSDTEWAGFGLF
Subjt:  SRKLPEPDYSSDLDTLSRWSVSSRKSISPFRYSV-SSSPSSFSSYQSSPRPTSDTEWAGFGLF

A0A6J1BQH3 uncharacterized protein DKFZp434B061-like6.2e-5674.42Show/hide
Query:  MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAVSHFPHPPN----SLHSSPRTQSERWRFVRSE-----QVS-SSGCFPSP
        MD DEFYR+PAAVPFKWEIKPGVPR HHRL  SP  SPP    QKLKPPP VSHF  P      SLHSS RT+S+RWRF RS      QVS ++GCFPSP
Subjt:  MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAVSHFPHPPN----SLHSSPRTQSERWRFVRSE-----QVS-SSGCFPSP

Query:  LPNRKSPKSVSRKLPEPDYSSDLDTLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
         PNRKS KS++RK PEP+Y+++L+TLSRWSVSSRKSISPFR SVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
Subjt:  LPNRKSPKSVSRKLPEPDYSSDLDTLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF

A0A6J1FHC7 uncharacterized protein LOC1114457755.1e-5071.01Show/hide
Query:  MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAV--SHFPHPPNSLHSSPRTQSERWRFVRS-----EQVSSSGCFPSPLPN
        MD DEFYRQPAAVPFKWEIKPGVPRNHHRL   PTHSP QH  +KLKPPPAV  + F    NSL    RT+S+RW   +S     EQV S GCF SPLPN
Subjt:  MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAV--SHFPHPPNSLHSSPRTQSERWRFVRS-----EQVSSSGCFPSPLPN

Query:  RKSPKSVSRKLPEPDYSSDLDTLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
        RK+ K V+RK PEPDY+S+L+TL RWSVSS+KSISPFR SVSS  SS SSYQSSPRPTSD+EWAGFGLF
Subjt:  RKSPKSVSRKLPEPDYSSDLDTLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF

A0A6J1ISY3 uncharacterized protein LOC1114803254.8e-4868.42Show/hide
Query:  MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAV--SHFPHPPNSLHSSPRTQSERW-----RFVRSEQVSSSGCFPSPLPN
        MD DEFYRQPAAVPFKWEIKPGVPRNHH L   PTHSP QH  +KLKPPPAV  + F    NSL    RT+S+RW     +    EQV S GCF SPLPN
Subjt:  MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAV--SHFPHPPNSLHSSPRTQSERW-----RFVRSEQVSSSGCFPSPLPN

Query:  RKSPKSVSRKLPEPDYSSDLDTLSRWSVSSRKSISPFRYSVSS--SPSSFSSYQSSPRPTSDTEWAGFGLF
        RK+ K ++RK PEPD +S+L+TL RWS+SS+KSISPFR SVSS  SPSS SSYQSSPRPTSD+EWAGFGLF
Subjt:  RKSPKSVSRKLPEPDYSSDLDTLSRWSVSSRKSISPFRYSVSS--SPSSFSSYQSSPRPTSDTEWAGFGLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G77400.1 CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789)3.3e-1733.62Show/hide
Query:  MDTDEFYRQPAAVPFKWEIKPGVPRNH---------------------HRLRHS-----PTHSPPQH---------------------YRQKLKP---PP
        +D D+ +++P  +PF WEI+PGVP+                         L HS     P  SPP                          KLKP   P 
Subjt:  MDTDEFYRQPAAVPFKWEIKPGVPRNH---------------------HRLRHS-----PTHSPPQH---------------------YRQKLKP---PP

Query:  AVSHFPHPPNSLHSSPRTQSERWRFVRSEQ--------------VSSSGCFPSPLPNRKSPKS-----VSRKLPEPD-YSSDLDTLSRWSVSSRKSISPF
        ++S F  P  S  SSPR  SERW+  R  +              V+  GCFPSP    +  KS      S    E D Y SD++T+S W+VSSR+S+SP 
Subjt:  AVSHFPHPPNSLHSSPRTQSERWRFVRSEQ--------------VSSSGCFPSPLPNRKSPKS-----VSRKLPEPD-YSSDLDTLSRWSVSSRKSISPF

Query:  RYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
             S  SSFSS + SPR  ++ EW GFGLF
Subjt:  RYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACCGATGAATTTTACCGGCAACCGGCTGCCGTTCCTTTCAAATGGGAGATCAAACCCGGCGTCCCCAGAAACCATCACCGCCTCCGCCACTCACCAACTCACTC
TCCCCCTCAACACTACCGTCAAAAGCTGAAACCTCCTCCTGCTGTTTCCCATTTCCCCCATCCTCCAAATTCTCTTCACTCGTCTCCTCGAACCCAGTCCGAACGCTGGC
GGTTCGTCCGATCCGAGCAAGTCTCGTCCTCTGGTTGCTTCCCATCGCCTTTGCCGAACCGGAAGTCCCCCAAGTCCGTCAGCCGGAAATTACCCGAACCGGATTACTCC
TCTGACTTGGACACTTTGTCTCGCTGGTCGGTTTCCAGTCGGAAGTCGATTTCGCCGTTCCGATATTCAGTTTCGTCGTCGCCGTCGTCGTTCTCGTCGTACCAATCGTC
TCCCCGTCCGACAAGTGATACCGAATGGGCAGGTTTTGGGCTATTTTGA
mRNA sequenceShow/hide mRNA sequence
AACCATCTCATTGCCTCTGATTTCGCCGAAGATTTTCAAATTTCCCCTACATAATAAGCCCCCACTTCCACTTCCCCTTCCACCTCCATTTCTTACCAATGGACACCGAT
GAATTTTACCGGCAACCGGCTGCCGTTCCTTTCAAATGGGAGATCAAACCCGGCGTCCCCAGAAACCATCACCGCCTCCGCCACTCACCAACTCACTCTCCCCCTCAACA
CTACCGTCAAAAGCTGAAACCTCCTCCTGCTGTTTCCCATTTCCCCCATCCTCCAAATTCTCTTCACTCGTCTCCTCGAACCCAGTCCGAACGCTGGCGGTTCGTCCGAT
CCGAGCAAGTCTCGTCCTCTGGTTGCTTCCCATCGCCTTTGCCGAACCGGAAGTCCCCCAAGTCCGTCAGCCGGAAATTACCCGAACCGGATTACTCCTCTGACTTGGAC
ACTTTGTCTCGCTGGTCGGTTTCCAGTCGGAAGTCGATTTCGCCGTTCCGATATTCAGTTTCGTCGTCGCCGTCGTCGTTCTCGTCGTACCAATCGTCTCCCCGTCCGAC
AAGTGATACCGAATGGGCAGGTTTTGGGCTATTTTGATTGGGCCTTAAGAGACGTTGTGGCCCATCTAGCTGGTGATTCTGAATGGGCTTGGTTTTGGGCTTTTTGGTTT
AGTGGATTTGAAGAGACTGTGGGCTTTAAGTTGCTTTGTGTAGAAATAGGAAGCTCTAAATCCCTAATTGTATTGTGATTTTTGCAATCATAGGGATTTTCTTATAAAAC
CCCATAAATTACTTAGTATGTTATAAAAAGAATAAAATCTAAGATTGTGTTTCATTGTGGTGG
Protein sequenceShow/hide protein sequence
MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHYRQKLKPPPAVSHFPHPPNSLHSSPRTQSERWRFVRSEQVSSSGCFPSPLPNRKSPKSVSRKLPEPDYS
SDLDTLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF