CuGenDBv2

Gene ID	CSPI04G17840
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Genome location	Chr4:15297176..15299657
RNA-Seq Expression	CSPI04G17840
Synteny	CSPI04G17840
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008444153.1 PREDICTED: uncharacterized protein At4g08330, chloroplastic [Cucumis melo]

1.3e-90

99.4

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Query:  MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
        MRQSPVFGDDYAHGTH+QSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
Subjt:  MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF

Query:  RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII
        RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII
Subjt:  RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII

XP_011653802.1 uncharacterized protein At4g08330, chloroplastic [Cucumis sativus]

9.8e-91

100

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Query:  MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
        MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
Subjt:  MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF

Query:  RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII
        RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII
Subjt:  RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII

XP_022937411.1 uncharacterized protein At4g08330, chloroplastic-like [Cucurbita moschata]

2.0e-75

85.71

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Query:  MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
        MRQSPVF DD+  GTHV++FSS SL PSSSRRDVYYSCGACGYELNLSS NRN STIGSKYGKSIKRGIISFLNIDESRFTQVD+LQCVPHFSK+SWGLF
Subjt:  MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF

Query:  RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII
        +RRIKLLCRKCGN+IGNA+++HT+SSPLVSDGSD SSLPNEVSRCMKYEVKIRALQPSSS+E  P +I
Subjt:  RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII

XP_022976871.1 uncharacterized protein At4g08330, chloroplastic-like [Cucurbita maxima]

1.5e-75

85.71

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Query:  MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
        MRQSPVFGDD+  GTHV++FSS SL PSSSRRDVYYSCGACGYELNLSS NRN STIGSKYGKSIKRGIISFLNIDESRFTQVD+LQCVPHFSK+SWGLF
Subjt:  MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF

Query:  RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII
        +RRIKLLCRKCGN+IGNA+++HT+SSPLVSDGSD SSLPNEVSRCMKYEVKIRALQPSSS+E    +I
Subjt:  RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII

XP_038896624.1 uncharacterized protein At4g08330, chloroplastic [Benincasa hispida]

2.7e-80

89.88

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Query:  MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
        MRQSPVFGDDY HGTH+QS SSASLFPSSSRRDVYYSCGACG+ELNLSS+NRNTSTIGSKY KSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
Subjt:  MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF

Query:  RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII
        RRRIKLLCRKCGN+IGNA S++T+SSPLVSDGSD SSLPNEVSRCMKYEVKIRALQPSSSNEF  +++
Subjt:  RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L375 Uncharacterized protein

4.7e-91

100

Show/hide

Query:  MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
        MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
Subjt:  MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF

Query:  RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII
        RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII
Subjt:  RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII

A0A1S3B9P1 uncharacterized protein At4g08330, chloroplastic

6.2e-91

99.4

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Query:  MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
        MRQSPVFGDDYAHGTH+QSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
Subjt:  MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF

Query:  RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII
        RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII
Subjt:  RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII

A0A5D3D741 Uncharacterized protein

6.2e-91

99.4

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Query:  MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
        MRQSPVFGDDYAHGTH+QSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
Subjt:  MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF

Query:  RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII
        RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII
Subjt:  RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII

A0A6J1FA98 uncharacterized protein At4g08330, chloroplastic-like

9.6e-76

85.71

Show/hide

Query:  MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
        MRQSPVF DD+  GTHV++FSS SL PSSSRRDVYYSCGACGYELNLSS NRN STIGSKYGKSIKRGIISFLNIDESRFTQVD+LQCVPHFSK+SWGLF
Subjt:  MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF

Query:  RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII
        +RRIKLLCRKCGN+IGNA+++HT+SSPLVSDGSD SSLPNEVSRCMKYEVKIRALQPSSS+E  P +I
Subjt:  RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII

A0A6J1II32 uncharacterized protein At4g08330, chloroplastic-like

7.3e-76

85.71

Show/hide

Query:  MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
        MRQSPVFGDD+  GTHV++FSS SL PSSSRRDVYYSCGACGYELNLSS NRN STIGSKYGKSIKRGIISFLNIDESRFTQVD+LQCVPHFSK+SWGLF
Subjt:  MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF

Query:  RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII
        +RRIKLLCRKCGN+IGNA+++HT+SSPLVSDGSD SSLPNEVSRCMKYEVKIRALQPSSS+E    +I
Subjt:  RRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII

SwissProt top hits

e value

%identity

Alignment

Q9STN5 Uncharacterized protein At4g08330, chloroplastic

7.1e-44

64.79

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Query:  SFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLFRRRIKLLCRKCGNYIGNA
        SFSS+S   SSS R V YSCG+CGYELNLSS NR TSTIGSKYGKS+K GIISF NIDE RF+QVDE QC+PHFS+ SWGLFR R KLLCRKC NYIGNA
Subjt:  SFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLFRRRIKLLCRKCGNYIGNA

Query:  HSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSS
                 LV+  SD +S    +    KY+++IR+LQPSS+
Subjt:  HSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSS

Arabidopsis top hits

e value

%identity

Alignment

AT4G08330.1 unknown protein

5.1e-45

64.79

Show/hide

Query:  SFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLFRRRIKLLCRKCGNYIGNA
        SFSS+S   SSS R V YSCG+CGYELNLSS NR TSTIGSKYGKS+K GIISF NIDE RF+QVDE QC+PHFS+ SWGLFR R KLLCRKC NYIGNA
Subjt:  SFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLFRRRIKLLCRKCGNYIGNA

Query:  HSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSS
                 LV+  SD +S    +    KY+++IR+LQPSS+
Subjt:  HSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSS

AT4G08330.2 unknown protein.

1.3e-35

57.75

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Query:  SFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLFRRRIKLLCRKCGNYIGNA
        SFSS+S   SSS R V           N SS NR TSTIGSKYGKS+K GIISF NIDE RF+QVDE QC+PHFS+ SWGLFR R KLLCRKC NYIGNA
Subjt:  SFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLFRRRIKLLCRKCGNYIGNA

Query:  HSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSS
                 LV+  SD +S    +    KY+++IR+LQPSS+
Subjt:  HSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGGCAGTCGCCGGTCTTCGGAGACGATTACGCCCATGGAACTCACGTCCAGTCCTTCTCCTCAGCTTCGCTCTTCCCTTCTTCTTCTCGCAGAGATGTTTATTACAG
CTGTGGGGCTTGTGGATACGAACTGAACTTGAGCTCTATTAACCGCAACACATCGACCATTGGCTCTAAATATGGTAAATCGATAAAGCGAGGGATCATATCATTTCTAA
ACATTGATGAAAGCAGATTTACGCAGGTCGATGAACTTCAATGTGTGCCTCATTTCTCAAAAAACTCTTGGGGTCTGTTTCGGCGAAGAATCAAACTACTGTGTCGAAAG
TGTGGAAACTATATTGGAAATGCTCATAGTAACCATACTGCCTCCTCACCACTTGTTTCAGATGGATCAGATTCATCATCCTTGCCCAATGAAGTCTCAAGGTGCATGAA
ATATGAAGTAAAAATTCGTGCTTTACAGCCTTCATCTTCCAACGAATTTGAGCCATCAATTATTTAA

mRNA sequence

Show/hide mRNA sequence

ATCTTCAACCTTTGCTTCTTCATCATAATTCTTCTTCCAATTCTCTCTTTCATCTCACTTCCTCTCGTACAAGCTTCAATTTCCTTTTTCTGTTTTGAGATCATTGCATC
TGTTTTTTTATTCTTGAGCTCGTTTATATTTAACTCGTAATTTGATCGATACTCTCTAAATTGGATCATCGTTTCTACCGACTGCGATTCCCCATTTACCACCTCGATAT
CCTCGTCAACCGTTGCCCCCACCATCGGAGACGGCCGTTGTATTCTCAACCAGTAGAATGAGGCAGTCGCCGGTCTTCGGAGACGATTACGCCCATGGAACTCACGTCCA
GTCCTTCTCCTCAGCTTCGCTCTTCCCTTCTTCTTCTCGCAGAGATGTTTATTACAGCTGTGGGGCTTGTGGATACGAACTGAACTTGAGCTCTATTAACCGCAACACAT
CGACCATTGGCTCTAAATATGGTAAATCGATAAAGCGAGGGATCATATCATTTCTAAACATTGATGAAAGCAGATTTACGCAGGTCGATGAACTTCAATGTGTGCCTCAT
TTCTCAAAAAACTCTTGGGGTCTGTTTCGGCGAAGAATCAAACTACTGTGTCGAAAGTGTGGAAACTATATTGGAAATGCTCATAGTAACCATACTGCCTCCTCACCACT
TGTTTCAGATGGATCAGATTCATCATCCTTGCCCAATGAAGTCTCAAGGTGCATGAAATATGAAGTAAAAATTCGTGCTTTACAGCCTTCATCTTCCAACGAATTTGAGC
CATCAATTATTTAAACAAGGACAAGAACAATGTTGGTTTGTCGAATGGTTCTTTGGAGCTAAAAGAGTTGAATTGCCTAGTAGCAACAGATGCAGGGATTATCGATATGT
TTGTTGTGTTTAAGTTGTGAATAGAATCAGGTTTCAAATGGAACAGAAGTGTAATTGAAAGGATTCACAGTTATGAAGTATGATTTATACGAGTGAGTTGTTTCAA

Protein sequence

Show/hide protein sequence

MRQSPVFGDDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLFRRRIKLLCRK
CGNYIGNAHSNHTASSPLVSDGSDSSSLPNEVSRCMKYEVKIRALQPSSSNEFEPSII

CSPI04G17840 (gene) of Cucumber (PI 183967) v1 genome