; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G17850 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G17850
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionplastid transcriptionally active 6
Genome locationChr4:15304832..15308008
RNA-Seq ExpressionCSPI04G17850
SyntenyCSPI04G17850
Gene Ontology termsGO:0000427 - plastid-encoded plastid RNA polymerase complex (cellular component)
InterPro domainsIPR044710 - PLASTID TRANSCRIPTIONALLY ACTIVE protein 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052214.1 uncharacterized protein E6C27_scaffold207G00250 [Cucumis melo var. makuwa]1.3e-18295.85Show/hide
Query:  MNSTVFLLSSPLPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLPPPT NRLR SSIS+  SLPHLPSLPY K+TP ASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFNISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDF+ISN F
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFNISNWF

KAG6591867.1 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.2e-17593.2Show/hide
Query:  MNSTVFLLSSPLPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-AA
        MNSTVFLLSSPLPP T +RLR  SIS+ +SL HLPSLPY K+TP ASPLF+PRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L AA
Subjt:  MNSTVFLLSSPLPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-AA

Query:  AAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        AAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
Subjt:  AAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        QSDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFKIIHS
Subjt:  QSDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

Query:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFNISNWF
        SERDDPTTVIEKEEWTKTRQDMERHLRKLRDF+ISNWF
Subjt:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFNISNWF

XP_008444205.1 PREDICTED: uncharacterized protein LOC103487613 [Cucumis melo]4.0e-18496.14Show/hide
Query:  MNSTVFLLSSPLPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLPPPT NRLR SSIS+  SLPHLPSLPY K+TP ASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFNISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDF+ISNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFNISNWF

XP_031740569.1 uncharacterized protein LOC101213327 [Cucumis sativus]2.2e-19099.11Show/hide
Query:  MNSTVFLLSSPLPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLSSPLPPPT NRLRVSSISS ASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFNISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDF+ISNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFNISNWF

XP_038896770.1 uncharacterized protein LOC120085024 [Benincasa hispida]5.4e-18194.96Show/hide
Query:  MNSTVFLLSSPLPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTV L+SSPL P T NRLR SSIS+ +SLPHLPSLPY K+TP  SPLF PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFNISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDF+ISNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFNISNWF

TrEMBL top hitse value%identityAlignment
A0A1S3BAM8 uncharacterized protein LOC1034876131.9e-18496.14Show/hide
Query:  MNSTVFLLSSPLPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLPPPT NRLR SSIS+  SLPHLPSLPY K+TP ASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFNISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDF+ISNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFNISNWF

A0A2P5F197 Plastid transcriptionally active protein3.4e-14176.83Show/hide
Query:  MNSTVFLLSSP---LPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL
        M +   LLSSP   L P T      S + SP   PHL + P  K  P  +PL       F V +DDGD D GGPDDYDMDDEE+EEVDNKKDFDIEYDPL
Subjt:  MNSTVFLLSSP---LPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL

Query:  AAAAAAAAGSDGVGDENISIV-QSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYI
        AAAAAA+A  D   DE+IS+V QS++FVSTQGWDSEM+VDYRINE EFHKISL HCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYI
Subjt:  AAAAAAAAGSDGVGDENISIV-QSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYI

Query:  RCAQSDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKI
        RCA+SDYG YNVTEPPID+PRDP+YKSE+E++KVFLTKH+RNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVT+P GR RDR++DLLV+RDNGNSFKI
Subjt:  RCAQSDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKI

Query:  IHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFNISNWF
        IHSSERDDPTTVIE+EEW K+R+DMERHLRKLRDFNISNWF
Subjt:  IHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFNISNWF

A0A5A7UA32 Uncharacterized protein6.2e-18395.85Show/hide
Query:  MNSTVFLLSSPLPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLPPPT NRLR SSIS+  SLPHLPSLPY K+TP ASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFNISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDF+ISN F
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFNISNWF

A0A6J1F6A7 uncharacterized protein LOC1114425721.4e-17492.35Show/hide
Query:  MNSTVFLLSSPLPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL---
        MNSTVFLLSSPLPP T +RLR  SIS+ +SL HLPSL Y K+TP ASPLF+PRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L   
Subjt:  MNSTVFLLSSPLPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL---

Query:  AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
        AAAAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
Subjt:  AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR

Query:  CAQSDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKII
        CAQSDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFKII
Subjt:  CAQSDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKII

Query:  HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFNISNWF
        HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDF+ISNWF
Subjt:  HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFNISNWF

A0A6J1IGR4 uncharacterized protein LOC1114770762.8e-17592.4Show/hide
Query:  MNSTVFLLSS--PLPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-
        MNSTVFLLSS  PLPP T +RLR  SIS+ +SLPHLPSLPY K+TP ASPLF+PRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L 
Subjt:  MNSTVFLLSS--PLPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-

Query:  --AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
          AAAAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
Subjt:  --AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY

Query:  IRCAQSDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFK
        IRCAQSDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFK
Subjt:  IRCAQSDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFK

Query:  IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFNISNWF
        IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDF+ISNWF
Subjt:  IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFNISNWF

SwissProt top hitse value%identityAlignment
Q9XI19 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic3.3e-13373.83Show/hide
Query:  SISSPASLPHLPS-----LPYWKTTPCASPLFLPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS
        S+ S  S P  PS        ++T    +PL L  R      V  DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA G    GD +I+
Subjt:  SISSPASLPHLPS-----LPYWKTTPCASPLFLPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS

Query:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDSP
         VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPD+DVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPID+P
Subjt:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDSP

Query:  RDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTK
        RDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+EEWTK
Subjt:  RDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTK

Query:  TRQDMERHLRKLRDFNISNWF
        TR+DME+HLRKLRDF++SNWF
Subjt:  TRQDMERHLRKLRDFNISNWF

Arabidopsis top hitse value%identityAlignment
AT1G21600.1 plastid transcriptionally active 62.4e-13473.83Show/hide
Query:  SISSPASLPHLPS-----LPYWKTTPCASPLFLPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS
        S+ S  S P  PS        ++T    +PL L  R      V  DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA G    GD +I+
Subjt:  SISSPASLPHLPS-----LPYWKTTPCASPLFLPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS

Query:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDSP
         VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPD+DVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPID+P
Subjt:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDSP

Query:  RDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTK
        RDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+EEWTK
Subjt:  RDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTK

Query:  TRQDMERHLRKLRDFNISNWF
        TR+DME+HLRKLRDF++SNWF
Subjt:  TRQDMERHLRKLRDFNISNWF

AT1G21600.2 plastid transcriptionally active 62.4e-13473.83Show/hide
Query:  SISSPASLPHLPS-----LPYWKTTPCASPLFLPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS
        S+ S  S P  PS        ++T    +PL L  R      V  DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA G    GD +I+
Subjt:  SISSPASLPHLPS-----LPYWKTTPCASPLFLPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS

Query:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDSP
         VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPD+DVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPID+P
Subjt:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDSP

Query:  RDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTK
        RDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+EEWTK
Subjt:  RDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTK

Query:  TRQDMERHLRKLRDFNISNWF
        TR+DME+HLRKLRDF++SNWF
Subjt:  TRQDMERHLRKLRDFNISNWF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCCACCGTCTTCCTCCTCTCCTCGCCGTTGCCGCCCCCCACATTCAACCGTCTCCGAGTCTCCTCCATCTCTTCCCCAGCCTCTCTTCCCCACCTCCCAAGCCT
GCCCTACTGGAAAACCACTCCCTGTGCATCTCCTCTCTTCCTCCCTAGAAGAAACCCTTTTCGAGTCTTCTCCGACGATGGCGACGGTGATAGCGGTGGTCCCGATGACT
ACGACATGGACGACGAGGAAATGGAGGAAGTCGACAACAAGAAAGATTTCGACATCGAGTACGATCCTCTAGCCGCCGCGGCAGCTGCAGCAGCGGGTTCCGACGGCGTC
GGCGATGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTGTCCACACAGGGATGGGATTCGGAGATGATTGTGGATTATAGGATAAACGAGGAGGAATTTCATAAGAT
TAGTTTGTTGCACTGTGATTTCTTCATTAGGAAGCCGCCGGATCCCGACAGTGATGTTTATGATTTCAGAGAGATGTATGTTACTCCTCCGGACACTGATGTTTATGCCA
TCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGTATATTAGATGTGCTCAGAGTGATTATGGATGCTACAATGTCACAGAACCACCTATTGATTCACCTAGAGATCCATTA
TACAAGTCAGAAAAGGAGGTTCTTAAGGTTTTCTTGACGAAGCACTTCAGAAACCGAAGGCTGCGGGACCCAGAATTTGTCCTAGACTTTGAGGAAATATATGTAATTGA
TTCAAAAACCAAGTCAATCACCAGGGCAAAAGTCCTGGTCACAGTTCCAGGAGGAAGAGATAGGGACAGGAGAAGCGACTTGCTCGTAGTTCGAGACAACGGGAACTCTT
TCAAGATCATCCATTCGAGTGAACGAGATGACCCGACCACGGTAATCGAGAAAGAAGAGTGGACCAAAACTAGACAAGATATGGAGAGACATCTTAGGAAGTTAAGGGAC
TTCAACATTTCAAATTGGTTTTAA
mRNA sequenceShow/hide mRNA sequence
TCCACACAGTATGCATCAACAAAATATAATAGGGTTCGAATTCTCCGGCGCCCGCTTCACAGAGGTTGCGTCCTCATGAACTCCACCGTCTTCCTCCTCTCCTCGCCGTT
GCCGCCCCCCACATTCAACCGTCTCCGAGTCTCCTCCATCTCTTCCCCAGCCTCTCTTCCCCACCTCCCAAGCCTGCCCTACTGGAAAACCACTCCCTGTGCATCTCCTC
TCTTCCTCCCTAGAAGAAACCCTTTTCGAGTCTTCTCCGACGATGGCGACGGTGATAGCGGTGGTCCCGATGACTACGACATGGACGACGAGGAAATGGAGGAAGTCGAC
AACAAGAAAGATTTCGACATCGAGTACGATCCTCTAGCCGCCGCGGCAGCTGCAGCAGCGGGTTCCGACGGCGTCGGCGATGAGAATATCTCGATTGTGCAGAGCAAAAG
CTTCGTGTCCACACAGGGATGGGATTCGGAGATGATTGTGGATTATAGGATAAACGAGGAGGAATTTCATAAGATTAGTTTGTTGCACTGTGATTTCTTCATTAGGAAGC
CGCCGGATCCCGACAGTGATGTTTATGATTTCAGAGAGATGTATGTTACTCCTCCGGACACTGATGTTTATGCCATCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGTAT
ATTAGATGTGCTCAGAGTGATTATGGATGCTACAATGTCACAGAACCACCTATTGATTCACCTAGAGATCCATTATACAAGTCAGAAAAGGAGGTTCTTAAGGTTTTCTT
GACGAAGCACTTCAGAAACCGAAGGCTGCGGGACCCAGAATTTGTCCTAGACTTTGAGGAAATATATGTAATTGATTCAAAAACCAAGTCAATCACCAGGGCAAAAGTCC
TGGTCACAGTTCCAGGAGGAAGAGATAGGGACAGGAGAAGCGACTTGCTCGTAGTTCGAGACAACGGGAACTCTTTCAAGATCATCCATTCGAGTGAACGAGATGACCCG
ACCACGGTAATCGAGAAAGAAGAGTGGACCAAAACTAGACAAGATATGGAGAGACATCTTAGGAAGTTAAGGGACTTCAACATTTCAAATTGGTTTTAAACAACACCATT
CAACCTGCAAAAGTCATCTCAGCATCCTCATCTATTTAGAAGTGAGGACAAGAAATGTGATTTCAAAGTTTTGAGTATGATTTGGATGACTGACTTACCTGTCATGATGA
TTCTCTCGTGCGAGTTCTCGACATATCTCCTGCCTGTGCTCTTGGGATCGGTATTGAGTTCCATTCTGGCTAGTTTGCACTTGCAATGATTGTTCTTGATTCAAATTCTT
CTCGCTTTCAATTCTCGTCACCAGATAACAGTCAATTAATCTAGGAGAGGTAGCTTTCTGTAGATTTGTAATGCTGAGAGAATTCACAAAAGCTATTGACGTGCAAAGGA
AAAACAAAACTGTACAATGGCTTCTAGCTAGCTTCCAAATGAGAGTATTTTCTATTGTAAGTAGCAAAACTTTGTAGCGTCAAGTAGTTCATGTATTAAGCTGCTTTTAT
TAGTTTTTAATAATGAAAAGAGTACAAGAGGAGAGTATATGTAGGCCATAAGCCCTCGCCACAAAATGAAATAAAACTAGGGCCTTGAACTCTACTAACCTTTAATTAGG
TTCAACTTACTTACTAGGAGTAACCCTATGGTGAGGATATAAGCTATTTGTTGACTAGGAGTGTATGAGGAGTGTATGAGATACAGATGGTGCTATTGTCAAGATTCTTC
TTTATAAAACGTATGTCTATCTC
Protein sequenceShow/hide protein sequence
MNSTVFLLSSPLPPPTFNRLRVSSISSPASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGV
GDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDSPRDPL
YKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRD
FNISNWF