CuGenDBv2

Gene ID	CSPI04G18020
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Ty3/gypsy retrotransposon protein
Genome location	Chr4:15447663..15448817
RNA-Seq Expression	CSPI04G18020
Synteny	CSPI04G18020
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0016310 - phosphorylation (biological process) GO:0000166 - nucleotide binding (molecular function) GO:0003676 - nucleic acid binding (molecular function) GO:0016301 - kinase activity (molecular function)
InterPro domains	IPR000953 - Chromo/chromo shadow domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR016197 - Chromo-like domain superfamily IPR036397 - Ribonuclease H superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0034981.1 Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]

1.2e-112

68.55

Show/hide

Query:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV
        MDF+EGLPK+NG+E  FVVVDR SKY HFL +KHPYTAK+V+++F KEIVRLHG+PKSIVSDRDK+FLS FW+ELF+MA T+L+ S  YHPQSDGQTEVV
Subjt:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV

Query:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLR----RNHLIDDLPY
        NRG+E+YLRCFCGE+PKEWVKWLHWA+YWYNTT+Q SLGIT FQAVYGRLP PL+Y+GDRDTP++ LDEQLKER + L  LKEHL+    +     D   
Subjt:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLR----RNHLIDDLPY

Query:  LTEEYEWRAVPEEVYGYLKNKARGWDVLVSWKGLPPHEATWELYEDMQQRFPDFHLEDKVKLEKECNDRPPIVHKYSRREKMN
           EYE   +PEE+ GY KNK  GWDVLV WKGLP  E TWE Y+++QQR+P+ HLED V LEK CNDR PI   YSRR+K N
Subjt:  LTEEYEWRAVPEEVYGYLKNKARGWDVLVSWKGLPPHEATWELYEDMQQRFPDFHLEDKVKLEKECNDRPPIVHKYSRREKMN

KAA0047079.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

2.1e-106

58.18

Show/hide

Query:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV
        MDF+EGLPK+ G++VIFVVVDRLSKY HFL LKHP++AK V+E F+KE+VRLHG+P+SIVSDRDKVFLS FWRELFR+A T+LN S  YHPQSDGQTEVV
Subjt:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV

Query:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLR--------------
        N+ +E+YLRCFCGEKP EW +WLHWA+YWYNTTY  S+GIT FQAVYGRLP PLIYYGD +TPNSTLD+QLK+R + L  LKEHL+              
Subjt:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLR--------------

Query:  -------------------------------------RNHLIDDL-PYLTEEYEWRAVPEEVYGYLKNKA-RGWDVLVSWKGLPPHEATWELYEDMQQRF
                                             R   +  L PY+   +EW   PEEVY Y KN A + W+ L+SWKGLPPHEATWE   DM+ +F
Subjt:  -------------------------------------RNHLIDDL-PYLTEEYEWRAVPEEVYGYLKNKA-RGWDVLVSWKGLPPHEATWELYEDMQQRF

Query:  PDFHLEDKVKLEKECNDRPPIVHKYSRREK
        PDFHLEDKV LE+E + RPPI+  Y R+ K
Subjt:  PDFHLEDKVKLEKECNDRPPIVHKYSRREK

KAA0050511.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

3.7e-103

52.86

Show/hide

Query:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV
        MDF+EGLPK+ G++VI VVVDRLSKY+HFL LKHP+TAK V+E FIKE+VRLHG+P+SIVSDRDKVFLS FW+ELFR+A T+LN S  YHPQSDGQTEVV
Subjt:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV

Query:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLR--------------
        N+ VE+YLRCFCGEKP+EW +WLHWA+YWYNTTY  S+GIT FQAVYGRLP PLIYYGD +TPNSTLD+QLK+R + L  LKEHL+              
Subjt:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLR--------------

Query:  --------------------------------------------------------------------------RNHLIDDL-PYLTEEYEWRAVPEEVY
                                                                                  R   +  L PY+ E +EW   PEEVY
Subjt:  --------------------------------------------------------------------------RNHLIDDL-PYLTEEYEWRAVPEEVY

Query:  GYLKN-KARGWDVLVSWKGLPPHEATWELYEDMQQRFPDFHLEDKVKLEKECNDRPPIVHKYSRREK
        GY KN   R W+ L+SWKGLPPHEATWE   DM+ +FP+FHLEDKV LE+E + RPPI+  Y R+ K
Subjt:  GYLKN-KARGWDVLVSWKGLPPHEATWELYEDMQQRFPDFHLEDKVKLEKECNDRPPIVHKYSRREK

KAA0066077.1 Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]

7.3e-107

53.51

Show/hide

Query:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV
        MDF+EGLPKA G++VI VVVDR SKYAHFL LKHP+ A+ V+EVF+KE+VRLHGFPKSIVSDRDKVFLS FW+ELFR+A T+LN S  YHPQ+DGQTEVV
Subjt:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV

Query:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLR-------------R
        +R VE+YLRCFCGE+PKEW+KW+HWA+YWYN TYQ SLG++ FQAVYGR PSPL+ YGD  T NSTLDEQLK+R + L  LKEHLR             R
Subjt:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLR-------------R

Query:  NHL--------------------------------------------------------------IDDL--------------PYLTEEYEWRAVPEEVY
         H+                                                              I  L              PY+TE +EW AVP+E +
Subjt:  NHL--------------------------------------------------------------IDDL--------------PYLTEEYEWRAVPEEVY

Query:  GYLKNKARGWDVLVSWKGLPPHEATWELYEDMQQRFPDFHLEDKVKLEKECNDRPPIVHKYSRREKMNKK
        GY KN    W+VL+SWKGLPPHEATWE Y D QQ F D+H+ED+ KLE+ECN RPPI+H+Y RR+K   K
Subjt:  GYLKNKARGWDVLVSWKGLPPHEATWELYEDMQQRFPDFHLEDKVKLEKECNDRPPIVHKYSRREKMNKK

TYK05078.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

2.1e-106

58.18

Show/hide

Query:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV
        MDF+EGLPK+ G++VIFVVVDRLSKY HFL LKHP++AK V+E F+KE+VRLHG+P+SIVSDRDKVFLS FWRELFR+A T+LN S  YHPQSDGQTEVV
Subjt:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV

Query:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLR--------------
        N+ +E+YLRCFCGEKP EW +WLHWA+YWYNTTY  S+GIT FQAVYGRLP PLIYYGD +TPNSTLD+QLK+R + L  LKEHL+              
Subjt:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLR--------------

Query:  -------------------------------------RNHLIDDL-PYLTEEYEWRAVPEEVYGYLKNKA-RGWDVLVSWKGLPPHEATWELYEDMQQRF
                                             R   +  L PY+   +EW   PEEVY Y KN A + W+ L+SWKGLPPHEATWE   DM+ +F
Subjt:  -------------------------------------RNHLIDDL-PYLTEEYEWRAVPEEVYGYLKNKA-RGWDVLVSWKGLPPHEATWELYEDMQQRF

Query:  PDFHLEDKVKLEKECNDRPPIVHKYSRREK
        PDFHLEDKV LE+E + RPPI+  Y R+ K
Subjt:  PDFHLEDKVKLEKECNDRPPIVHKYSRREK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7U0S0 Ty3/gypsy retrotransposon protein

1.0e-106

58.18

Show/hide

Query:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV
        MDF+EGLPK+ G++VIFVVVDRLSKY HFL LKHP++AK V+E F+KE+VRLHG+P+SIVSDRDKVFLS FWRELFR+A T+LN S  YHPQSDGQTEVV
Subjt:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV

Query:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLR--------------
        N+ +E+YLRCFCGEKP EW +WLHWA+YWYNTTY  S+GIT FQAVYGRLP PLIYYGD +TPNSTLD+QLK+R + L  LKEHL+              
Subjt:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLR--------------

Query:  -------------------------------------RNHLIDDL-PYLTEEYEWRAVPEEVYGYLKNKA-RGWDVLVSWKGLPPHEATWELYEDMQQRF
                                             R   +  L PY+   +EW   PEEVY Y KN A + W+ L+SWKGLPPHEATWE   DM+ +F
Subjt:  -------------------------------------RNHLIDDL-PYLTEEYEWRAVPEEVYGYLKNKA-RGWDVLVSWKGLPPHEATWELYEDMQQRF

Query:  PDFHLEDKVKLEKECNDRPPIVHKYSRREK
        PDFHLEDKV LE+E + RPPI+  Y R+ K
Subjt:  PDFHLEDKVKLEKECNDRPPIVHKYSRREK

A0A5A7VG68 Transposon Tf2-9 polyprotein

3.5e-107

53.51

Show/hide

Query:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV
        MDF+EGLPKA G++VI VVVDR SKYAHFL LKHP+ A+ V+EVF+KE+VRLHGFPKSIVSDRDKVFLS FW+ELFR+A T+LN S  YHPQ+DGQTEVV
Subjt:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV

Query:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLR-------------R
        +R VE+YLRCFCGE+PKEW+KW+HWA+YWYN TYQ SLG++ FQAVYGR PSPL+ YGD  T NSTLDEQLK+R + L  LKEHLR             R
Subjt:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLR-------------R

Query:  NHL--------------------------------------------------------------IDDL--------------PYLTEEYEWRAVPEEVY
         H+                                                              I  L              PY+TE +EW AVP+E +
Subjt:  NHL--------------------------------------------------------------IDDL--------------PYLTEEYEWRAVPEEVY

Query:  GYLKNKARGWDVLVSWKGLPPHEATWELYEDMQQRFPDFHLEDKVKLEKECNDRPPIVHKYSRREKMNKK
        GY KN    W+VL+SWKGLPPHEATWE Y D QQ F D+H+ED+ KLE+ECN RPPI+H+Y RR+K   K
Subjt:  GYLKNKARGWDVLVSWKGLPPHEATWELYEDMQQRFPDFHLEDKVKLEKECNDRPPIVHKYSRREKMNKK

A0A5D3BRN6 Transposon Tf2-9 polyprotein

5.6e-113

68.55

Show/hide

Query:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV
        MDF+EGLPK+NG+E  FVVVDR SKY HFL +KHPYTAK+V+++F KEIVRLHG+PKSIVSDRDK+FLS FW+ELF+MA T+L+ S  YHPQSDGQTEVV
Subjt:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV

Query:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLR----RNHLIDDLPY
        NRG+E+YLRCFCGE+PKEWVKWLHWA+YWYNTT+Q SLGIT FQAVYGRLP PL+Y+GDRDTP++ LDEQLKER + L  LKEHL+    +     D   
Subjt:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLR----RNHLIDDLPY

Query:  LTEEYEWRAVPEEVYGYLKNKARGWDVLVSWKGLPPHEATWELYEDMQQRFPDFHLEDKVKLEKECNDRPPIVHKYSRREKMN
           EYE   +PEE+ GY KNK  GWDVLV WKGLP  E TWE Y+++QQR+P+ HLED V LEK CNDR PI   YSRR+K N
Subjt:  LTEEYEWRAVPEEVYGYLKNKARGWDVLVSWKGLPPHEATWELYEDMQQRFPDFHLEDKVKLEKECNDRPPIVHKYSRREKMN

A0A5D3C1D4 Ty3/gypsy retrotransposon protein

1.0e-106

58.18

Show/hide

Query:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV
        MDF+EGLPK+ G++VIFVVVDRLSKY HFL LKHP++AK V+E F+KE+VRLHG+P+SIVSDRDKVFLS FWRELFR+A T+LN S  YHPQSDGQTEVV
Subjt:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV

Query:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLR--------------
        N+ +E+YLRCFCGEKP EW +WLHWA+YWYNTTY  S+GIT FQAVYGRLP PLIYYGD +TPNSTLD+QLK+R + L  LKEHL+              
Subjt:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLR--------------

Query:  -------------------------------------RNHLIDDL-PYLTEEYEWRAVPEEVYGYLKNKA-RGWDVLVSWKGLPPHEATWELYEDMQQRF
                                             R   +  L PY+   +EW   PEEVY Y KN A + W+ L+SWKGLPPHEATWE   DM+ +F
Subjt:  -------------------------------------RNHLIDDL-PYLTEEYEWRAVPEEVYGYLKNKA-RGWDVLVSWKGLPPHEATWELYEDMQQRF

Query:  PDFHLEDKVKLEKECNDRPPIVHKYSRREK
        PDFHLEDKV LE+E + RPPI+  Y R+ K
Subjt:  PDFHLEDKVKLEKECNDRPPIVHKYSRREK

A0A5D3DM31 Ty3/gypsy retrotransposon protein

1.8e-103

52.86

Show/hide

Query:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV
        MDF+EGLPK+ G++VI VVVDRLSKY+HFL LKHP+TAK V+E FIKE+VRLHG+P+SIVSDRDKVFLS FW+ELFR+A T+LN S  YHPQSDGQTEVV
Subjt:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV

Query:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLR--------------
        N+ VE+YLRCFCGEKP+EW +WLHWA+YWYNTTY  S+GIT FQAVYGRLP PLIYYGD +TPNSTLD+QLK+R + L  LKEHL+              
Subjt:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLR--------------

Query:  --------------------------------------------------------------------------RNHLIDDL-PYLTEEYEWRAVPEEVY
                                                                                  R   +  L PY+ E +EW   PEEVY
Subjt:  --------------------------------------------------------------------------RNHLIDDL-PYLTEEYEWRAVPEEVY

Query:  GYLKN-KARGWDVLVSWKGLPPHEATWELYEDMQQRFPDFHLEDKVKLEKECNDRPPIVHKYSRREK
        GY KN   R W+ L+SWKGLPPHEATWE   DM+ +FP+FHLEDKV LE+E + RPPI+  Y R+ K
Subjt:  GYLKN-KARGWDVLVSWKGLPPHEATWELYEDMQQRFPDFHLEDKVKLEKECNDRPPIVHKYSRREK

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.7e-29

33.85

Show/hide

Query:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV
        MDF+  LP+++GY  +FVVVDR SK A  +P     TA+  + +F + ++   G PK I++D D +F S+ W++     +  + +S+ Y PQ+DGQTE  
Subjt:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV

Query:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLP--SPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLRRNHL
        N+ VE  LRC C   P  WV  +   +  YN     +  +T F+ V+   P  SPL    +  + +   DE  +E + + + +KEHL  N++
Subjt:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLP--SPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLRRNHL

P0CT35 Transposon Tf2-2 polyprotein

1.7e-29

33.85

Show/hide

Query:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV
        MDF+  LP+++GY  +FVVVDR SK A  +P     TA+  + +F + ++   G PK I++D D +F S+ W++     +  + +S+ Y PQ+DGQTE  
Subjt:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV

Query:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLP--SPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLRRNHL
        N+ VE  LRC C   P  WV  +   +  YN     +  +T F+ V+   P  SPL    +  + +   DE  +E + + + +KEHL  N++
Subjt:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLP--SPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLRRNHL

P0CT36 Transposon Tf2-3 polyprotein

1.7e-29

33.85

Show/hide

Query:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV
        MDF+  LP+++GY  +FVVVDR SK A  +P     TA+  + +F + ++   G PK I++D D +F S+ W++     +  + +S+ Y PQ+DGQTE  
Subjt:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV

Query:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLP--SPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLRRNHL
        N+ VE  LRC C   P  WV  +   +  YN     +  +T F+ V+   P  SPL    +  + +   DE  +E + + + +KEHL  N++
Subjt:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLP--SPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLRRNHL

P0CT41 Transposon Tf2-12 polyprotein

1.7e-29

33.85

Show/hide

Query:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV
        MDF+  LP+++GY  +FVVVDR SK A  +P     TA+  + +F + ++   G PK I++D D +F S+ W++     +  + +S+ Y PQ+DGQTE  
Subjt:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV

Query:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLP--SPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLRRNHL
        N+ VE  LRC C   P  WV  +   +  YN     +  +T F+ V+   P  SPL    +  + +   DE  +E + + + +KEHL  N++
Subjt:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLP--SPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLRRNHL

Q9UR07 Transposon Tf2-11 polyprotein

1.7e-29

33.85

Show/hide

Query:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV
        MDF+  LP+++GY  +FVVVDR SK A  +P     TA+  + +F + ++   G PK I++D D +F S+ W++     +  + +S+ Y PQ+DGQTE  
Subjt:  MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVV

Query:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLP--SPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLRRNHL
        N+ VE  LRC C   P  WV  +   +  YN     +  +T F+ V+   P  SPL    +  + +   DE  +E + + + +KEHL  N++
Subjt:  NRGVESYLRCFCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLP--SPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLRRNHL

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGATTTCGTGGAAGGGTTACCAAAGGCAAATGGATATGAAGTCATATTTGTTGTGGTAGATAGGCTGAGTAAATATGCACATTTTCTACCATTGAAACACCCTTACAC
TGCCAAGAATGTGTCTGAAGTTTTCATCAAGGAAATAGTTCGATTACATGGATTTCCTAAATCTATAGTTTCAGATAGAGATAAAGTGTTTTTGAGCAAGTTTTGGAGGG
AGTTATTCAGAATGGCAGATACAAGATTGAATTATAGTATCGTATATCATCCTCAATCAGATGGGCAAACGGAAGTAGTAAATCGAGGGGTAGAGAGTTATCTACGTTGT
TTCTGCGGAGAAAAGCCAAAGGAATGGGTGAAATGGTTACATTGGGCGAAATATTGGTACAACACTACTTACCAACATTCATTAGGAATTACAACATTCCAAGCCGTCTA
TGGTAGATTACCCTCTCCATTGATTTATTATGGAGATCGAGATACACCGAATTCAACACTAGATGAACAACTGAAAGAAAGGGTTTTGATGCTCGAAGTGTTGAAGGAAC
ATTTGAGAAGAAATCATCTCATAGATGATCTTCCTTATTTGACAGAGGAATATGAATGGAGGGCAGTACCTGAGGAAGTATATGGATATTTGAAGAATAAGGCTAGAGGG
TGGGATGTGTTAGTGAGTTGGAAAGGACTCCCTCCACATGAAGCTACATGGGAACTTTATGAAGATATGCAACAACGGTTTCCAGATTTTCACCTTGAGGACAAGGTGAA
ATTGGAGAAGGAGTGTAATGATAGACCTCCTATAGTACATAAATACAGTAGGAGGGAGAAGATGAATAAGAAGTAG

mRNA sequence

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Protein sequence

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MDFVEGLPKANGYEVIFVVVDRLSKYAHFLPLKHPYTAKNVSEVFIKEIVRLHGFPKSIVSDRDKVFLSKFWRELFRMADTRLNYSIVYHPQSDGQTEVVNRGVESYLRC
FCGEKPKEWVKWLHWAKYWYNTTYQHSLGITTFQAVYGRLPSPLIYYGDRDTPNSTLDEQLKERVLMLEVLKEHLRRNHLIDDLPYLTEEYEWRAVPEEVYGYLKNKARG
WDVLVSWKGLPPHEATWELYEDMQQRFPDFHLEDKVKLEKECNDRPPIVHKYSRREKMNKK

CSPI04G18020 (gene) of Cucumber (PI 183967) v1 genome