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CSPI04G18750 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G18750
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCACTA en-spm transposon protein
Genome locationChr4:16282039..16282508
RNA-Seq ExpressionCSPI04G18750
SyntenyCSPI04G18750
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033533.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.2e-1344.09Show/hide
Query:  MSAEIMQSNFPSNTHEED--YFLYLDALDNACG--SSSVDDTSVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMI
        MS  IM S++P N  + D  +  + D LDN  G  SS  DDT+ + S    TPT RR R +SR +++ER V  N  IP++I P  ++P+   A RFS  I
Subjt:  MSAEIMQSNFPSNTHEED--YFLYLDALDNACG--SSSVDDTSVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMI

Query:  GVLTQDKFPIQPLKWADVPLECIKVVK
        G   +  FPI+ LKWADV  E I+VVK
Subjt:  GVLTQDKFPIQPLKWADVPLECIKVVK

KAA0065669.1 (R)-mandelonitrile lyase 1-like [Cucumis melo var. makuwa]1.6e-1343.22Show/hide
Query:  NFPSNTHEEDYFLY--LDALDNACGSSSVDDTSVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMIGVLTQDKFPI
        +FPS+  E   F Y  +DA +NA G+SS+DD SV             VR+  +N+++ERYVQQN  IPISI    D+P+L    RF+C IGVL ++ F +
Subjt:  NFPSNTHEEDYFLY--LDALDNACGSSSVDDTSVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMIGVLTQDKFPI

Query:  QPLKWADVPLECIKVVKE
        + LK A+V LE I++V +
Subjt:  QPLKWADVPLECIKVVKE

TYJ99709.1 (R)-mandelonitrile lyase 1-like [Cucumis melo var. makuwa]2.1e-1350.59Show/hide
Query:  SVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMIGVLTQDKFPIQPLKWADVPLECIKVVK
        ++N   P PT T+RR R++S+N++ +RY+++N  I ISI+  GD+P+     RFS  IGVLT+D FPI  LKWADVP E I+V+K
Subjt:  SVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMIGVLTQDKFPIQPLKWADVPLECIKVVK

TYK04850.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.1e-1344Show/hide
Query:  AEIMQSNFPSNTHEED--YFLYLDALDN--ACGSSSVDDTSVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMIGV
        + I+ S  PSN  E D  +  + D LDN  A GSSSV D +   S    TPT RR R  SR +++ER+V  N  IP++I P  ++P+   A RFS  IGV
Subjt:  AEIMQSNFPSNTHEED--YFLYLDALDN--ACGSSSVDDTSVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMIGV

Query:  LTQDKFPIQPLKWADVPLECIKVVK
          +  FP++ LKW DV  E I+VVK
Subjt:  LTQDKFPIQPLKWADVPLECIKVVK

XP_031741168.1 uncharacterized protein LOC116403757 [Cucumis sativus]1.9e-1443.7Show/hide
Query:  NFPSNTHEEDYFLY--LDALDNACGSSSVDDTSVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMIGVLTQDKFPI
        +F ++  E D   Y  ++  ++A G+SSV DTS      A TP   R R +SRN+ ++RYVQQN  IPISI+P+ D+P+   A  FSC I  LT+D FP 
Subjt:  NFPSNTHEEDYFLY--LDALDNACGSSSVDDTSVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMIGVLTQDKFPI

Query:  QPLKWADVPLECIKVVKEA
          LKW     E IK+VK++
Subjt:  QPLKWADVPLECIKVVKEA

TrEMBL top hitse value%identityAlignment
A0A5A7SSV3 CACTA en-spm transposon protein6.0e-1444.09Show/hide
Query:  MSAEIMQSNFPSNTHEED--YFLYLDALDNACG--SSSVDDTSVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMI
        MS  IM S++P N  + D  +  + D LDN  G  SS  DDT+ + S    TPT RR R +SR +++ER V  N  IP++I P  ++P+   A RFS  I
Subjt:  MSAEIMQSNFPSNTHEED--YFLYLDALDNACG--SSSVDDTSVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMI

Query:  GVLTQDKFPIQPLKWADVPLECIKVVK
        G   +  FPI+ LKWADV  E I+VVK
Subjt:  GVLTQDKFPIQPLKWADVPLECIKVVK

A0A5A7VJM4 (R)-mandelonitrile lyase 1-like7.8e-1443.22Show/hide
Query:  NFPSNTHEEDYFLY--LDALDNACGSSSVDDTSVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMIGVLTQDKFPI
        +FPS+  E   F Y  +DA +NA G+SS+DD SV             VR+  +N+++ERYVQQN  IPISI    D+P+L    RF+C IGVL ++ F +
Subjt:  NFPSNTHEEDYFLY--LDALDNACGSSSVDDTSVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMIGVLTQDKFPI

Query:  QPLKWADVPLECIKVVKE
        + LK A+V LE I++V +
Subjt:  QPLKWADVPLECIKVVKE

A0A5D3BAV1 (R)-mandelonitrile lyase 1-like1.3e-1343.97Show/hide
Query:  FPSNTHEEDYFLY--LDALDNACGSSSVDDTSVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMIGVLTQDKFPIQ
        FPS   + D   Y  +D  +NA G  S DDTS   +    T T RR ++ S+++ +ERYVQQN  IPISI  + D+P+      FSC I VLT D FPI+
Subjt:  FPSNTHEEDYFLY--LDALDNACGSSSVDDTSVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMIGVLTQDKFPIQ

Query:  PLKWADVPLECIKVVK
          KW +V L+ I++VK
Subjt:  PLKWADVPLECIKVVK

A0A5D3BL58 (R)-mandelonitrile lyase 1-like1.0e-1350.59Show/hide
Query:  SVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMIGVLTQDKFPIQPLKWADVPLECIKVVK
        ++N   P PT T+RR R++S+N++ +RY+++N  I ISI+  GD+P+     RFS  IGVLT+D FPI  LKWADVP E I+V+K
Subjt:  SVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMIGVLTQDKFPIQPLKWADVPLECIKVVK

A0A5D3C0E2 CACTA en-spm transposon protein1.0e-1344Show/hide
Query:  AEIMQSNFPSNTHEED--YFLYLDALDN--ACGSSSVDDTSVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMIGV
        + I+ S  PSN  E D  +  + D LDN  A GSSSV D +   S    TPT RR R  SR +++ER+V  N  IP++I P  ++P+   A RFS  IGV
Subjt:  AEIMQSNFPSNTHEED--YFLYLDALDN--ACGSSSVDDTSVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMIGV

Query:  LTQDKFPIQPLKWADVPLECIKVVK
          +  FP++ LKW DV  E I+VVK
Subjt:  LTQDKFPIQPLKWADVPLECIKVVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCAGAAATAATGCAATCTAACTTTCCGAGTAATACGCATGAGGAAGACTATTTCCTTTATCTAGACGCGTTGGATAACGCATGTGGTTCGTCGTCAGTAGACGA
CACTTCAGTAAATCCCTCTCATCCGGCACCCACTCCCACTGTGAGGAGAGTACGACGATATTCTCGAAACATAGATGTCGAGCGATACGTACAGCAGAATGAGAGCATTC
CCATTTCCATCCTCCCTAAAGGGGATAGACCTGTCTTAGCACAAGCCCCTCGTTTCAGTTGCATGATCGGTGTGTTGACACAAGACAAGTTTCCTATTCAACCTCTGAAG
TGGGCAGATGTACCACTAGAGTGCATCAAGGTCGTCAAGGAGGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCAGAAATAATGCAATCTAACTTTCCGAGTAATACGCATGAGGAAGACTATTTCCTTTATCTAGACGCGTTGGATAACGCATGTGGTTCGTCGTCAGTAGACGA
CACTTCAGTAAATCCCTCTCATCCGGCACCCACTCCCACTGTGAGGAGAGTACGACGATATTCTCGAAACATAGATGTCGAGCGATACGTACAGCAGAATGAGAGCATTC
CCATTTCCATCCTCCCTAAAGGGGATAGACCTGTCTTAGCACAAGCCCCTCGTTTCAGTTGCATGATCGGTGTGTTGACACAAGACAAGTTTCCTATTCAACCTCTGAAG
TGGGCAGATGTACCACTAGAGTGCATCAAGGTCGTCAAGGAGGCCTAA
Protein sequenceShow/hide protein sequence
MSAEIMQSNFPSNTHEEDYFLYLDALDNACGSSSVDDTSVNPSHPAPTPTVRRVRRYSRNIDVERYVQQNESIPISILPKGDRPVLAQAPRFSCMIGVLTQDKFPIQPLK
WADVPLECIKVVKEA